RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
MRPS28-208ENST00000521605 ZNF521Q96K83 1311 aa14.16□□□□□ -0.14
MRPS28-208ENST00000521605 NPR1P16066 1061 aa14.16□□□□□ -0.14
MRPS28-208ENST00000521605 NBPF5PQ86XG9 351 aaPredicted RBP14.16□□□□□ -0.14
MRPS28-208ENST00000521605 SYNE4Q8N205 404 aa14.16□□□□□ -0.14
MRPS28-208ENST00000521605 TLL2Q9Y6L7 1015 aa14.16□□□□□ -0.14
MRPS28-208ENST00000521605 CAMTA2O94983 1202 aa14.15□□□□□ -0.14
MRPS28-208ENST00000521605 MAP2K2P36507 400 aa14.15□□□□□ -0.14
MRPS28-208ENST00000521605 RTKN2Q8IZC4 609 aa14.15□□□□□ -0.14
MRPS28-208ENST00000521605 JDP2Q8WYK2 163 aa14.15□□□□□ -0.14
MRPS28-208ENST00000521605 SUPT16HQ9Y5B9 1047 aaKnown RBP14.15□□□□□ -0.14
MRPS28-208ENST00000521605 FAM177BA6PVY3 158 aa14.14□□□□□ -0.15
MRPS28-208ENST00000521605 CA12O43570 354 aa14.14□□□□□ -0.15
MRPS28-208ENST00000521605 A1BGP04217 495 aa14.14□□□□□ -0.15
MRPS28-208ENST00000521605 HMOX1P09601 288 aa14.14□□□□□ -0.15
MRPS28-208ENST00000521605 IL13P35225 146 aa14.14□□□□□ -0.15
MRPS28-208ENST00000521605 IL6STP40189 918 aaPredicted RBP14.14□□□□□ -0.15
MRPS28-208ENST00000521605 EPS15P42566 896 aa14.14□□□□□ -0.15
MRPS28-208ENST00000521605 EIF6P56537 245 aaKnown RBP14.14□□□□□ -0.15
MRPS28-208ENST00000521605 ZNF496Q96IT1 587 aaPredicted RBP14.14□□□□□ -0.15
MRPS28-208ENST00000521605 PDE4DIPQ5VU43 2346 aa14.14□□□□□ -0.15
MRPS28-208ENST00000521605 TRPM7Q96QT4 1865 aa14.14□□□□□ -0.15
MRPS28-208ENST00000521605 MTHFSDQ2M296 383 aaKnown RBP14.13□□□□□ -0.15
MRPS28-208ENST00000521605 CIAPIN1Q6FI81 312 aa14.13□□□□□ -0.15
MRPS28-208ENST00000521605 DZIP3Q86Y13 1208 aaKnown RBP14.13□□□□□ -0.15
MRPS28-208ENST00000521605 HEG1Q9ULI3 1381 aa14.12□□□□□ -0.15
MRPS28-208ENST00000521605 BCORQ6W2J9 1755 aa14.12□□□□□ -0.15
MRPS28-208ENST00000521605 COL4A5P29400 1685 aa14.12□□□□□ -0.15
MRPS28-208ENST00000521605 CELF2O95319 508 aaKnown RBP14.12□□□□□ -0.15
MRPS28-208ENST00000521605 PIP4K2AP48426 406 aaPredicted RBP14.12□□□□□ -0.15
MRPS28-208ENST00000521605 SCNN1DP51172 638 aa14.12□□□□□ -0.15
MRPS28-208ENST00000521605 CCDC27Q2M243 656 aa14.12□□□□□ -0.15
MRPS28-208ENST00000521605 ZNF408Q9H9D4 720 aa14.12□□□□□ -0.15
MRPS28-208ENST00000521605 BRPF1P55201 1214 aaPredicted RBP14.11□□□□□ -0.15
MRPS28-208ENST00000521605 SAPCD2Q86UD0 394 aa14.11□□□□□ -0.15
MRPS28-208ENST00000521605 RUNDC1Q96C34 613 aa14.11□□□□□ -0.15
MRPS28-208ENST00000521605 PNNQ9H307 717 aaKnown RBP14.11□□□□□ -0.15
MRPS28-208ENST00000521605 PRPF38BQ5VTL8 546 aaKnown RBP14.1□□□□□ -0.15
MRPS28-208ENST00000521605 USP50Q70EL3 339 aaPredicted RBP14.1□□□□□ -0.15
MRPS28-208ENST00000521605 TEX13AQ9BXU3 409 aaPredicted RBP14.1□□□□□ -0.15
MRPS28-208ENST00000521605 TEFQ10587 303 aa14.09□□□□□ -0.15
MRPS28-208ENST00000521605 ZNF790Q6PG37 636 aa14.09□□□□□ -0.15
MRPS28-208ENST00000521605 TRMT2AQ8IZ69 625 aaKnown RBP14.09□□□□□ -0.15
MRPS28-208ENST00000521605 GLIS2Q9BZE0 524 aaPredicted RBP14.09□□□□□ -0.15
MRPS28-208ENST00000521605 ALDH1B1P30837 517 aa14.08□□□□□ -0.16
MRPS28-208ENST00000521605 TPTE2Q6XPS3 522 aa14.08□□□□□ -0.16
MRPS28-208ENST00000521605 LARGE2Q8N3Y3 721 aa14.08□□□□□ -0.16
MRPS28-208ENST00000521605 ZIC5Q96T25 663 aa14.08□□□□□ -0.16
MRPS28-208ENST00000521605 NIP7Q9Y221 180 aaKnown RBP eCLIP14.08□□□□□ -0.16
MRPS28-208ENST00000521605 KLRG2A4D1S0 409 aaPredicted RBP14.07□□□□□ -0.16
MRPS28-208ENST00000521605 GTF2E1P29083 439 aaPredicted RBP14.07□□□□□ -0.16
MRPS28-208ENST00000521605 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
MRPS28-208ENST00000521605 FMNL2Q96PY5 1086 aa14.07□□□□□ -0.16
MRPS28-208ENST00000521605 PSMD1Q99460 953 aa14.07□□□□□ -0.16
MRPS28-208ENST00000521605 ZNF652Q9Y2D9 606 aa14.07□□□□□ -0.16
MRPS28-208ENST00000521605 TCERG1O14776 1098 aaKnown RBP14.06□□□□□ -0.16
MRPS28-208ENST00000521605 SLC51AQ86UW1 340 aa14.06□□□□□ -0.16
MRPS28-208ENST00000521605 SNED1Q8TER0 1413 aa14.06□□□□□ -0.16
MRPS28-208ENST00000521605 E9PSI1 815 aa14.05□□□□□ -0.16
MRPS28-208ENST00000521605 KCNQ3O43525 872 aa14.05□□□□□ -0.16
MRPS28-208ENST00000521605 DIAPH1O60610 1272 aaKnown RBP14.05□□□□□ -0.16
MRPS28-208ENST00000521605 WDR63Q8IWG1 891 aa14.05□□□□□ -0.16
MRPS28-208ENST00000521605 ADARB2Q9NS39 739 aaKnown RBP14.05□□□□□ -0.16
MRPS28-208ENST00000521605 APAF1O14727 1248 aa14.04□□□□□ -0.16
MRPS28-208ENST00000521605 SLFN5Q08AF3 891 aa14.04□□□□□ -0.16
MRPS28-208ENST00000521605 NOGQ13253 232 aa14.04□□□□□ -0.16
MRPS28-208ENST00000521605 CLEC4GQ6UXB4 293 aa14.04□□□□□ -0.16
MRPS28-208ENST00000521605 NIM1KQ8IY84 436 aa14.04□□□□□ -0.16
MRPS28-208ENST00000521605 IL17REQ8NFR9 667 aa14.04□□□□□ -0.16
MRPS28-208ENST00000521605 HHIPL1Q96JK4 782 aa14.04□□□□□ -0.16
MRPS28-208ENST00000521605 GPRC5DQ9NZD1 345 aa14.04□□□□□ -0.16
MRPS28-208ENST00000521605 USP16Q9Y5T5 823 aa14.04□□□□□ -0.16
MRPS28-208ENST00000521605 PRAMEF22A3QJZ6 481 aa14.03□□□□□ -0.16
MRPS28-208ENST00000521605 HUNKP57058 714 aa14.03□□□□□ -0.16
MRPS28-208ENST00000521605 SIPA1L3O60292 1781 aaPredicted RBP14.02□□□□□ -0.16
MRPS28-208ENST00000521605 ABCC12Q96J65 1359 aa14.02□□□□□ -0.17
MRPS28-208ENST00000521605 PPIP5K2O43314 1243 aa14.02□□□□□ -0.17
MRPS28-208ENST00000521605 DUSP27Q5VZP5 1158 aa14.02□□□□□ -0.17
MRPS28-208ENST00000521605 NUTM1Q86Y26 1132 aa14.02□□□□□ -0.17
MRPS28-208ENST00000521605 RPGRQ92834 1020 aaKnown RBP14.02□□□□□ -0.17
MRPS28-208ENST00000521605 PLEKHF1Q96S99 279 aa14.02□□□□□ -0.17
MRPS28-208ENST00000521605 RCAN3Q9UKA8 241 aa14.02□□□□□ -0.17
MRPS28-208ENST00000521605 IL16Q14005 1332 aa14.01□□□□□ -0.17
MRPS28-208ENST00000521605 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
MRPS28-208ENST00000521605 GNAT3A8MTJ3 354 aa14.01□□□□□ -0.17
MRPS28-208ENST00000521605 TRPA1O75762 1119 aa14.01□□□□□ -0.17
MRPS28-208ENST00000521605 U2AF1L5P0DN76 240 aaPredicted RBP14.01□□□□□ -0.17
MRPS28-208ENST00000521605 GMPSP49915 693 aaPredicted RBP14.01□□□□□ -0.17
MRPS28-208ENST00000521605 U2AF1Q01081 240 aaKnown RBP eCLIP14.01□□□□□ -0.17
MRPS28-208ENST00000521605 HLFQ16534 295 aa14.01□□□□□ -0.17
MRPS28-208ENST00000521605 AOC3Q16853 763 aa14.01□□□□□ -0.17
MRPS28-208ENST00000521605 CC2D2BQ6DHV5 1058 aa14.01□□□□□ -0.17
MRPS28-208ENST00000521605 DLK2Q6UY11 383 aa14.01□□□□□ -0.17
MRPS28-208ENST00000521605 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
MRPS28-208ENST00000521605 PPEF1O14829 653 aaPredicted RBP13.99□□□□□ -0.17
MRPS28-208ENST00000521605 CXCL9Q07325 125 aa13.99□□□□□ -0.17
MRPS28-208ENST00000521605 CRY2Q49AN0 593 aa13.99□□□□□ -0.17
MRPS28-208ENST00000521605 CDC37L1Q7L3B6 337 aa13.99□□□□□ -0.17
MRPS28-208ENST00000521605 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
MRPS28-208ENST00000521605 BCL2L13Q9BXK5 485 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms