RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	DIXDC1	Q155Q3	683 aa		7.14	□□□□□ -1.27
CDH17-205	ENST00000521491	MRPL50	Q8N5N7	158 aa	Known RBP	7.14	□□□□□ -1.27
CDH17-205	ENST00000521491	IP6K1	Q92551	441 aa		7.14	□□□□□ -1.27
CDH17-205	ENST00000521491	NLRP2	Q9NX02	1062 aa		7.14	□□□□□ -1.27
CDH17-205	ENST00000521491	NUDC	Q9Y266	331 aa		7.14	□□□□□ -1.27
CDH17-205	ENST00000521491	IL2RB	P14784	551 aa		7.13	□□□□□ -1.27
CDH17-205	ENST00000521491	CD46	P15529	392 aa		7.13	□□□□□ -1.27
CDH17-205	ENST00000521491	ANKRD24	Q8TF21	1146 aa		7.13	□□□□□ -1.27
CDH17-205	ENST00000521491	GPR162	Q16538	588 aa		7.12	□□□□□ -1.27
CDH17-205	ENST00000521491	SH3D19	Q5HYK7	790 aa		7.12	□□□□□ -1.27
CDH17-205	ENST00000521491	SWT1	Q5T5J6	900 aa	Known RBP	7.12	□□□□□ -1.27
CDH17-205	ENST00000521491	AEBP1	Q8IUX7	1158 aa		7.12	□□□□□ -1.27
CDH17-205	ENST00000521491	USHBP1	Q8N6Y0	703 aa		7.12	□□□□□ -1.27
CDH17-205	ENST00000521491	DDX54	Q8TDD1	881 aa	Known RBP	7.12	□□□□□ -1.27
CDH17-205	ENST00000521491	SALL2	Q9Y467	1007 aa	Predicted RBP	7.12	□□□□□ -1.27
CDH17-205	ENST00000521491	TUBGCP6	Q96RT7	1819 aa		7.12	□□□□□ -1.27
CDH17-205	ENST00000521491	SHANK3	Q9BYB0	1731 aa		7.12	□□□□□ -1.27
CDH17-205	ENST00000521491	MAP3K5	Q99683	1374 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	PNPLA7	Q6ZV29	1317 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	IGSF1	Q8N6C5	1336 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	COL24A1	Q17RW2	1714 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	PKD1L3	Q7Z443	1732 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	PRKAR2B	P31323	418 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	SULT6B1	Q6IMI4	303 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	ANKRD13D	Q6ZTN6	518 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	SLF2	Q8IX21	1173 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	RDH13	Q8NBN7	331 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	NLGN2	Q8NFZ4	835 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	KAT6B	Q8WYB5	2073 aa		7.11	□□□□□ -1.27
CDH17-205	ENST00000521491	NCAPD2	Q15021	1401 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	QSER1	Q2KHR3	1735 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	KDR	P35968	1356 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	UTRN	P46939	3433 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	MAPK8IP3	Q9UPT6	1336 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	APAF1	O14727	1248 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	HR	O43593	1189 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	NBPF6	Q5VWK0	638 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	RUNDC1	Q96C34	613 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	ZFR	Q96KR1	1074 aa	Known RBP	7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	NBPF4	Q96M43	638 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	PLEKHF1	Q96S99	279 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	RRP7A	Q9Y3A4	280 aa	Known RBP	7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	DOT1L	Q8TEK3	1739 aa		7.1	□□□□□ -1.27
CDH17-205	ENST00000521491	ZBED9	Q6R2W3	1325 aa		7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	YBX3	P16989	372 aa	Known RBP eCLIP	7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	SKIV2L	Q15477	1246 aa	Known RBP	7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	SLC27A3	Q5K4L6	730 aa		7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	SAMD7	Q7Z3H4	446 aa		7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	NUTM1	Q86Y26	1132 aa		7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	NECTIN2	Q92692	538 aa		7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	SYTL4	Q96C24	671 aa	Predicted RBP	7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	TBC1D2	Q9BYX2	928 aa		7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	TFCP2L1	Q9NZI6	479 aa		7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	MEGF6	O75095	1541 aa		7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	LY75	O60449	1722 aa		7.09	□□□□□ -1.27
CDH17-205	ENST00000521491	GOLGA8CP	A6NN73	597 aa		7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	GIGYF1	O75420	1035 aa	Predicted RBP	7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	NEFM	P07197	916 aa		7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	POLD1	P28340	1107 aa		7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	COL23A1	Q86Y22	540 aa	Predicted RBP	7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	SLC16A10	Q8TF71	515 aa		7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	LRCH3	Q96II8	777 aa		7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	PHACTR3	Q96KR7	559 aa		7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	PNN	Q9H307	717 aa	Known RBP	7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	SCN11A	Q9UI33	1791 aa		7.08	□□□□□ -1.28
CDH17-205	ENST00000521491	GCGR	P47871	477 aa		7.07	□□□□□ -1.28
CDH17-205	ENST00000521491	USP46	P62068	366 aa		7.07	□□□□□ -1.28
CDH17-205	ENST00000521491	MYSM1	Q5VVJ2	828 aa		7.07	□□□□□ -1.28
CDH17-205	ENST00000521491	MSL1	Q68DK7	614 aa		7.07	□□□□□ -1.28
CDH17-205	ENST00000521491	ANKK1	Q8NFD2	765 aa		7.07	□□□□□ -1.28
CDH17-205	ENST00000521491	SPIRE2	Q8WWL2	714 aa		7.07	□□□□□ -1.28
CDH17-205	ENST00000521491	SIPA1L3	O60292	1781 aa	Predicted RBP	7.07	□□□□□ -1.28
CDH17-205	ENST00000521491	RNF40	O75150	1001 aa		7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	KDM4A	O75164	1064 aa		7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	SLC10A3	P09131	477 aa		7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	TMPO	P42166	694 aa	Known RBP	7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	CLK2	P49760	499 aa	Known RBP	7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	RIPK4	P57078	832 aa		7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	NFE2L2	Q16236	605 aa		7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	ZCRB1	Q8TBF4	217 aa	Known RBP	7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	KRTAP3-3	Q9BYR6	98 aa		7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	KRTAP3-2	Q9BYR7	98 aa		7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	CCNL1	Q9UK58	526 aa	Predicted RBP	7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	TOGARAM1	Q9Y4F4	1720 aa		7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	ADAMTS7	Q9UKP4	1686 aa		7.06	□□□□□ -1.28
CDH17-205	ENST00000521491	ZNF521	Q96K83	1311 aa		7.05	□□□□□ -1.28
CDH17-205	ENST00000521491	MTHFSD	Q2M296	383 aa	Known RBP	7.05	□□□□□ -1.28
CDH17-205	ENST00000521491	IFFO2	Q5TF58	517 aa		7.05	□□□□□ -1.28
CDH17-205	ENST00000521491	POTEG	Q6S5H5	508 aa		7.05	□□□□□ -1.28
CDH17-205	ENST00000521491	SMIM5	Q71RC9	77 aa		7.05	□□□□□ -1.28
CDH17-205	ENST00000521491	KDM3B	Q7LBC6	1761 aa		7.05	□□□□□ -1.28
CDH17-205	ENST00000521491	ATP10D	Q9P241	1426 aa		7.04	□□□□□ -1.28
CDH17-205	ENST00000521491	POTEM	A6NI47	508 aa		7.04	□□□□□ -1.28
CDH17-205	ENST00000521491	CFH	P08603	1231 aa		7.04	□□□□□ -1.28
CDH17-205	ENST00000521491	GJA5	P36382	358 aa		7.04	□□□□□ -1.28
CDH17-205	ENST00000521491	AMIGO3	Q86WK7	504 aa		7.04	□□□□□ -1.28
CDH17-205	ENST00000521491	WWC1	Q8IX03	1113 aa		7.04	□□□□□ -1.28
CDH17-205	ENST00000521491	RAPGEF4	Q8WZA2	1011 aa		7.04	□□□□□ -1.28

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