RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 TAOK3Q9H2K8 898 aa27.96■■■□□ 2.07
HOXA3-204ENST00000521401 ALDH1B1P30837 517 aa27.95■■■□□ 2.06
HOXA3-204ENST00000521401 SLC10A5Q5PT55 438 aa27.95■■■□□ 2.06
HOXA3-204ENST00000521401 OLFM4Q6UX06 510 aa27.95■■■□□ 2.06
HOXA3-204ENST00000521401 PLBD2Q8NHP8 589 aa27.95■■■□□ 2.06
HOXA3-204ENST00000521401 HOXA10P31260 410 aaPredicted RBP27.94■■■□□ 2.06
HOXA3-204ENST00000521401 HYPKQ9NX55 129 aa27.94■■■□□ 2.06
HOXA3-204ENST00000521401 ARFGEF2Q9Y6D5 1785 aa27.94■■■□□ 2.06
HOXA3-204ENST00000521401 KDM2BQ8NHM5 1336 aa27.93■■■□□ 2.06
HOXA3-204ENST00000521401 CCDC93Q567U6 631 aa27.93■■■□□ 2.06
HOXA3-204ENST00000521401 ANKRD13DQ6ZTN6 518 aa27.93■■■□□ 2.06
HOXA3-204ENST00000521401 FER1L6Q2WGJ9 1857 aa27.92■■■□□ 2.06
HOXA3-204ENST00000521401 TSPYL6Q8N831 410 aa27.92■■■□□ 2.06
HOXA3-204ENST00000521401 TSR2Q969E8 191 aaKnown RBP27.91■■■□□ 2.06
HOXA3-204ENST00000521401 ISCA1Q9BUE6 129 aa27.91■■■□□ 2.06
HOXA3-204ENST00000521401 RNF123Q5XPI4 1314 aa27.91■■■□□ 2.06
HOXA3-204ENST00000521401 GLTPD2A6NH11 291 aa27.9■■■□□ 2.06
HOXA3-204ENST00000521401 SYNE4Q8N205 404 aa27.9■■■□□ 2.06
HOXA3-204ENST00000521401 PHAXQ9H814 394 aaKnown RBP27.9■■■□□ 2.06
HOXA3-204ENST00000521401 RRAGCQ9HB90 399 aa27.9■■■□□ 2.06
HOXA3-204ENST00000521401 TOMM70O94826 608 aa27.89■■■□□ 2.06
HOXA3-204ENST00000521401 RPGRQ92834 1020 aaKnown RBP27.89■■■□□ 2.06
HOXA3-204ENST00000521401 NLRP3Q96P20 1036 aa27.89■■■□□ 2.06
HOXA3-204ENST00000521401 CRAMP1Q96RY5 1269 aa27.89■■■□□ 2.06
HOXA3-204ENST00000521401 SNED1Q8TER0 1413 aa27.89■■■□□ 2.06
HOXA3-204ENST00000521401 IL16Q14005 1332 aa27.89■■■□□ 2.05
HOXA3-204ENST00000521401 FKBP4Q02790 459 aaKnown RBP eCLIP27.88■■■□□ 2.05
HOXA3-204ENST00000521401 RTKN2Q8IZC4 609 aa27.87■■■□□ 2.05
HOXA3-204ENST00000521401 RBM17Q96I25 401 aaKnown RBP27.87■■■□□ 2.05
HOXA3-204ENST00000521401 TRMT112Q9UI30 125 aaKnown RBP27.87■■■□□ 2.05
HOXA3-204ENST00000521401 CACNA1SQ13698 1873 aa27.87■■■□□ 2.05
HOXA3-204ENST00000521401 SLC51AQ86UW1 340 aa27.86■■■□□ 2.05
HOXA3-204ENST00000521401 ATP5J2-PTCD1G3V325 749 aa27.85■■■□□ 2.05
HOXA3-204ENST00000521401 HCLS1P14317 486 aaPredicted RBP27.85■■■□□ 2.05
HOXA3-204ENST00000521401 CCDC30Q5VVM6 783 aa27.85■■■□□ 2.05
HOXA3-204ENST00000521401 ZNF428Q96B54 188 aa27.85■■■□□ 2.05
HOXA3-204ENST00000521401 SH3TC1Q8TE82 1336 aa27.85■■■□□ 2.05
HOXA3-204ENST00000521401 ANKRD36CQ5JPF3 1778 aa27.84■■■□□ 2.05
HOXA3-204ENST00000521401 TRIM28Q13263 835 aaKnown RBP27.84■■■□□ 2.05
HOXA3-204ENST00000521401 ZNF277Q9NRM2 450 aaPredicted RBP27.84■■■□□ 2.05
HOXA3-204ENST00000521401 SALL2Q9Y467 1007 aaPredicted RBP27.84■■■□□ 2.05
HOXA3-204ENST00000521401 HSPA6P17066 643 aa27.83■■■□□ 2.05
HOXA3-204ENST00000521401 FAM9BQ8IZU0 186 aa27.83■■■□□ 2.05
HOXA3-204ENST00000521401 TIAM2Q8IVF5 1701 aa27.82■■■□□ 2.04
HOXA3-204ENST00000521401 POTECB2RU33 542 aa27.82■■■□□ 2.04
HOXA3-204ENST00000521401 GOLGA2Q08379 1002 aa27.82■■■□□ 2.04
HOXA3-204ENST00000521401 CC2D2BQ6DHV5 1058 aa27.82■■■□□ 2.04
HOXA3-204ENST00000521401 RIC3Q7Z5B4 369 aa27.82■■■□□ 2.04
HOXA3-204ENST00000521401 WDR63Q8IWG1 891 aa27.82■■■□□ 2.04
HOXA3-204ENST00000521401 RBM46Q8TBY0 533 aaKnown RBP27.82■■■□□ 2.04
HOXA3-204ENST00000521401 CCDC88AQ3V6T2 1871 aa27.81■■■□□ 2.04
HOXA3-204ENST00000521401 DPY19L2Q6NUT2 758 aa27.81■■■□□ 2.04
HOXA3-204ENST00000521401 PSMD1Q99460 953 aa27.81■■■□□ 2.04
HOXA3-204ENST00000521401 CHMP4AQ9BY43 222 aa27.81■■■□□ 2.04
HOXA3-204ENST00000521401 PPEF1O14829 653 aaPredicted RBP27.8■■■□□ 2.04
HOXA3-204ENST00000521401 TWISTNBQ3B726 338 aaPredicted RBP27.8■■■□□ 2.04
HOXA3-204ENST00000521401 FAM89AQ96GI7 184 aa27.8■■■□□ 2.04
HOXA3-204ENST00000521401 ABCC4O15439 1325 aa27.8■■■□□ 2.04
HOXA3-204ENST00000521401 FANCIQ9NVI1 1328 aa27.79■■■□□ 2.04
HOXA3-204ENST00000521401 VEGFAP15692 232 aaPredicted RBP27.79■■■□□ 2.04
HOXA3-204ENST00000521401 C16orf71Q8IYS4 520 aaPredicted RBP27.79■■■□□ 2.04
HOXA3-204ENST00000521401 TCERG1O14776 1098 aaKnown RBP27.78■■■□□ 2.04
HOXA3-204ENST00000521401 IARSP41252 1262 aaKnown RBP27.78■■■□□ 2.04
HOXA3-204ENST00000521401 DICER1Q9UPY3 1922 aaKnown RBP27.77■■■□□ 2.04
HOXA3-204ENST00000521401 DDNO94850 711 aaPredicted RBP27.77■■■□□ 2.04
HOXA3-204ENST00000521401 SPINK5Q9NQ38 1064 aaPredicted RBP27.77■■■□□ 2.04
HOXA3-204ENST00000521401 ATP6V0A2Q9Y487 856 aa27.77■■■□□ 2.04
HOXA3-204ENST00000521401 GRIPAP1Q4V328 841 aa27.76■■■□□ 2.03
HOXA3-204ENST00000521401 MYD88Q99836 296 aa27.76■■■□□ 2.03
HOXA3-204ENST00000521401 METTL22Q9BUU2 404 aaPredicted RBP27.75■■■□□ 2.03
HOXA3-204ENST00000521401 BBOX1O75936 387 aa27.74■■■□□ 2.03
HOXA3-204ENST00000521401 GRAPQ13588 217 aa27.74■■■□□ 2.03
HOXA3-204ENST00000521401 SF3B3Q15393 1217 aaKnown RBP27.74■■■□□ 2.03
HOXA3-204ENST00000521401 RTL5Q5HYW3 569 aaPredicted RBP27.74■■■□□ 2.03
HOXA3-204ENST00000521401 GRAPLQ8TC17 118 aaPredicted RBP27.74■■■□□ 2.03
HOXA3-204ENST00000521401 WDR90Q96KV7 1748 aa27.74■■■□□ 2.03
HOXA3-204ENST00000521401 ZNF541Q9H0D2 1346 aa27.73■■■□□ 2.03
HOXA3-204ENST00000521401 DDX58O95786 925 aaKnown RBP27.73■■■□□ 2.03
HOXA3-204ENST00000521401 FSTL1Q12841 308 aa27.73■■■□□ 2.03
HOXA3-204ENST00000521401 DDX46Q7L014 1031 aaKnown RBP27.73■■■□□ 2.03
HOXA3-204ENST00000521401 G2E3Q7L622 706 aa27.73■■■□□ 2.03
HOXA3-204ENST00000521401 ZBTB38Q8NAP3 1195 aaPredicted RBP27.73■■■□□ 2.03
HOXA3-204ENST00000521401 STK31Q9BXU1 1019 aa27.73■■■□□ 2.03
HOXA3-204ENST00000521401 FZD9O00144 591 aa27.72■■■□□ 2.03
HOXA3-204ENST00000521401 IRS4O14654 1257 aaPredicted RBP27.72■■■□□ 2.03
HOXA3-204ENST00000521401 VAMP4O75379 141 aa27.72■■■□□ 2.03
HOXA3-204ENST00000521401 KSR2Q6VAB6 950 aa27.72■■■□□ 2.03
HOXA3-204ENST00000521401 SP8Q8IXZ3 490 aa27.72■■■□□ 2.03
HOXA3-204ENST00000521401 CCDC191Q8NCU4 936 aa27.72■■■□□ 2.03
HOXA3-204ENST00000521401 MAP3K2Q9Y2U5 619 aa27.72■■■□□ 2.03
HOXA3-204ENST00000521401 PI4KAP2A4QPH2 592 aa27.71■■■□□ 2.03
HOXA3-204ENST00000521401 SLC4A2P04920 1241 aa27.71■■■□□ 2.03
HOXA3-204ENST00000521401 EXOSC9Q06265 439 aaKnown RBP27.71■■■□□ 2.03
HOXA3-204ENST00000521401 PI4KAP1Q8N8J0 262 aa27.71■■■□□ 2.03
HOXA3-204ENST00000521401 COL4A5P29400 1685 aa27.71■■■□□ 2.03
HOXA3-204ENST00000521401 LAMB2P55268 1798 aa27.7■■■□□ 2.02
HOXA3-204ENST00000521401 IGKV5-2P06315 115 aa27.69■■■□□ 2.02
HOXA3-204ENST00000521401 SMC1BQ8NDV3 1235 aa27.69■■■□□ 2.02
HOXA3-204ENST00000521401 L3MBTL3Q96JM7 780 aaPredicted RBP27.69■■■□□ 2.02
HOXA3-204ENST00000521401 RTFDC1Q9BY42 306 aaPredicted RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms