RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 CARMIL3Q8ND23 1372 aa13.31□□□□□ -0.28
TRIM35-204ENST00000521283 SCN7AQ01118 1682 aa13.31□□□□□ -0.28
TRIM35-204ENST00000521283 POTEB3A0JP26 581 aa13.3□□□□□ -0.28
TRIM35-204ENST00000521283 SERPINB2P05120 415 aa13.3□□□□□ -0.28
TRIM35-204ENST00000521283 DDR1Q08345 913 aa13.3□□□□□ -0.28
TRIM35-204ENST00000521283 POTEBQ6S5H4 581 aa13.3□□□□□ -0.28
TRIM35-204ENST00000521283 BCL2L12Q9HB09 334 aa13.3□□□□□ -0.28
TRIM35-204ENST00000521283 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
TRIM35-204ENST00000521283 AFDNP55196 1824 aaKnown RBP13.29□□□□□ -0.28
TRIM35-204ENST00000521283 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
TRIM35-204ENST00000521283 ERVV-1B6SEH8 477 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 CHL1O00533 1208 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 HOXB7P09629 217 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 DOK7Q18PE1 504 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 CCDC146Q8IYE0 955 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 CFAP44Q96MT7 982 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 TBC1D2BQ9UPU7 963 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 BCORQ6W2J9 1755 aa13.29□□□□□ -0.28
TRIM35-204ENST00000521283 N4BP2Q86UW6 1770 aaPredicted RBP13.28□□□□□ -0.28
TRIM35-204ENST00000521283 BRCA1P38398 1863 aaKnown RBP13.28□□□□□ -0.28
TRIM35-204ENST00000521283 YBX3P16989 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRIM35-204ENST00000521283 PDE6BP35913 854 aa13.28□□□□□ -0.28
TRIM35-204ENST00000521283 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
TRIM35-204ENST00000521283 THUMPD2Q9BTF0 503 aaKnown RBP13.28□□□□□ -0.28
TRIM35-204ENST00000521283 ARFGEF1Q9Y6D6 1849 aa13.27□□□□□ -0.28
TRIM35-204ENST00000521283 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
TRIM35-204ENST00000521283 NPHP1O15259 732 aa13.27□□□□□ -0.29
TRIM35-204ENST00000521283 PPP1R37O75864 691 aa13.27□□□□□ -0.29
TRIM35-204ENST00000521283 HOXB1P14653 301 aaPredicted RBP13.27□□□□□ -0.29
TRIM35-204ENST00000521283 ST5P78524 1137 aa13.27□□□□□ -0.29
TRIM35-204ENST00000521283 DALRD3Q5D0E6 543 aaKnown RBP13.27□□□□□ -0.29
TRIM35-204ENST00000521283 KIF6Q6ZMV9 814 aa13.27□□□□□ -0.29
TRIM35-204ENST00000521283 NGEFQ8N5V2 710 aa13.27□□□□□ -0.29
TRIM35-204ENST00000521283 BRIP1Q9BX63 1249 aa13.27□□□□□ -0.29
TRIM35-204ENST00000521283 KIAA1551Q9HCM1 1747 aa13.27□□□□□ -0.29
TRIM35-204ENST00000521283 PRAMEF22A3QJZ6 481 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 H0YIN7 160 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 DPEP1P16444 411 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 GNAI1P63096 354 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 TBC1D9BQ66K14 1250 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 NBPF10Q6P3W6 841 aaKnown RBP13.26□□□□□ -0.29
TRIM35-204ENST00000521283 TPTE2Q6XPS3 522 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 ZNF710Q8N1W2 664 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 NBPF15Q8N660 670 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 IFT57Q9NWB7 429 aa13.26□□□□□ -0.29
TRIM35-204ENST00000521283 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
TRIM35-204ENST00000521283 FAM205CA6NFA0 338 aa13.25□□□□□ -0.29
TRIM35-204ENST00000521283 APAF1O14727 1248 aa13.25□□□□□ -0.29
TRIM35-204ENST00000521283 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
TRIM35-204ENST00000521283 HS3ST6Q96QI5 342 aa13.25□□□□□ -0.29
TRIM35-204ENST00000521283 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
TRIM35-204ENST00000521283 MRS2Q9HD23 443 aa13.25□□□□□ -0.29
TRIM35-204ENST00000521283 BCS1LQ9Y276 419 aa13.25□□□□□ -0.29
TRIM35-204ENST00000521283 DLEC1Q9Y238 1755 aa13.25□□□□□ -0.29
TRIM35-204ENST00000521283 MAP3K15Q6ZN16 1313 aa13.24□□□□□ -0.29
TRIM35-204ENST00000521283 KCNA3P22001 575 aa13.24□□□□□ -0.29
TRIM35-204ENST00000521283 BICDL1Q6ZP65 573 aa13.24□□□□□ -0.29
TRIM35-204ENST00000521283 NUP98P52948 1817 aa13.23□□□□□ -0.29
TRIM35-204ENST00000521283 KIF3CO14782 793 aa13.23□□□□□ -0.29
TRIM35-204ENST00000521283 HSP90AB3PQ58FF7 597 aa13.23□□□□□ -0.29
TRIM35-204ENST00000521283 PRR5LQ6MZQ0 368 aa13.23□□□□□ -0.29
TRIM35-204ENST00000521283 NBPF5PQ86XG9 351 aaPredicted RBP13.23□□□□□ -0.29
TRIM35-204ENST00000521283 TTLL6Q8N841 843 aa13.23□□□□□ -0.29
TRIM35-204ENST00000521283 ZNF784Q8NCA9 323 aaPredicted RBP13.23□□□□□ -0.29
TRIM35-204ENST00000521283 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRIM35-204ENST00000521283 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
TRIM35-204ENST00000521283 ZNF853P0CG23 659 aa13.22□□□□□ -0.29
TRIM35-204ENST00000521283 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
TRIM35-204ENST00000521283 C2CD5Q86YS7 1000 aa13.22□□□□□ -0.29
TRIM35-204ENST00000521283 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM35-204ENST00000521283 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
TRIM35-204ENST00000521283 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
TRIM35-204ENST00000521283 RNF123Q5XPI4 1314 aa13.21□□□□□ -0.29
TRIM35-204ENST00000521283 MYL6BP14649 208 aa13.21□□□□□ -0.29
TRIM35-204ENST00000521283 GTF2E1P29083 439 aaPredicted RBP13.21□□□□□ -0.29
TRIM35-204ENST00000521283 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.29
TRIM35-204ENST00000521283 PARP10Q53GL7 1025 aa13.21□□□□□ -0.29
TRIM35-204ENST00000521283 SOGA3Q5TF21 947 aa13.21□□□□□ -0.29
TRIM35-204ENST00000521283 STYK1Q6J9G0 422 aa13.21□□□□□ -0.29
TRIM35-204ENST00000521283 GIGYF2Q6Y7W6 1299 aaKnown RBP13.21□□□□□ -0.29
TRIM35-204ENST00000521283 ARHGAP27Q6ZUM4 889 aa13.21□□□□□ -0.29
TRIM35-204ENST00000521283 CNKSR1Q969H4 720 aa13.21□□□□□ -0.29
TRIM35-204ENST00000521283 DBF4Q9UBU7 674 aaPredicted RBP13.21□□□□□ -0.29
TRIM35-204ENST00000521283 IL16Q14005 1332 aa13.2□□□□□ -0.3
TRIM35-204ENST00000521283 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
TRIM35-204ENST00000521283 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
TRIM35-204ENST00000521283 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
TRIM35-204ENST00000521283 KLRG2A4D1S0 409 aaPredicted RBP13.19□□□□□ -0.3
TRIM35-204ENST00000521283 C2orf72A6NCS6 295 aa13.19□□□□□ -0.3
TRIM35-204ENST00000521283 CHRNA5P30532 468 aa13.19□□□□□ -0.3
TRIM35-204ENST00000521283 PDIA6Q15084 440 aa13.19□□□□□ -0.3
TRIM35-204ENST00000521283 HDGFL1Q5TGJ6 251 aa13.19□□□□□ -0.3
TRIM35-204ENST00000521283 GPR153Q6NV75 609 aa13.19□□□□□ -0.3
TRIM35-204ENST00000521283 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
TRIM35-204ENST00000521283 ANKRD31Q8N7Z5 1873 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms