RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 SCTRP47872 440 aa6.54□□□□□ -1.36
VPS13B-208ENST00000521037 CC2D2BQ6DHV5 1058 aa6.54□□□□□ -1.36
VPS13B-208ENST00000521037 PODNQ7Z5L7 613 aa6.54□□□□□ -1.36
VPS13B-208ENST00000521037 CCDC125Q86Z20 511 aa6.54□□□□□ -1.36
VPS13B-208ENST00000521037 PNMA1Q8ND90 353 aa6.54□□□□□ -1.36
VPS13B-208ENST00000521037 GJD4Q96KN9 370 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-208ENST00000521037 GAS2L1Q99501 681 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-208ENST00000521037 CFHR5Q9BXR6 569 aa6.54□□□□□ -1.36
VPS13B-208ENST00000521037 QTRT2Q9H974 415 aaKnown RBP6.54□□□□□ -1.36
VPS13B-208ENST00000521037 GPBP1L1Q9HC44 474 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-208ENST00000521037 CLIP1P30622 1438 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 FMN1Q68DA7 1419 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 ZBBXA8MT70 800 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 F11P03951 625 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 FBXO45P0C2W1 286 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 ERICH6Q7L0X2 663 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 TXNDC2Q86VQ3 553 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 DDRGK1Q96HY6 314 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 OSBPL3Q9H4L5 887 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 HRH3Q9Y5N1 445 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 TMEM2Q9UHN6 1383 aa6.53□□□□□ -1.36
VPS13B-208ENST00000521037 ATRNO75882 1429 aa6.52□□□□□ -1.37
VPS13B-208ENST00000521037 KIF3BO15066 747 aa6.52□□□□□ -1.37
VPS13B-208ENST00000521037 BAG6P46379 1132 aa6.52□□□□□ -1.37
VPS13B-208ENST00000521037 LINC00114Q6XXX2 140 aa6.52□□□□□ -1.37
VPS13B-208ENST00000521037 KLRG1Q96E93 195 aa6.52□□□□□ -1.37
VPS13B-208ENST00000521037 TRERF1Q96PN7 1200 aa6.52□□□□□ -1.37
VPS13B-208ENST00000521037 OXCT2Q9BYC2 517 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-208ENST00000521037 NUCKS1Q9H1E3 243 aaKnown RBP6.52□□□□□ -1.37
VPS13B-208ENST00000521037 TIMELESSQ9UNS1 1208 aa6.52□□□□□ -1.37
VPS13B-208ENST00000521037 CDK11AQ9UQ88 783 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-208ENST00000521037 K7ELQ4 463 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-208ENST00000521037 BRINP3Q76B58 766 aa6.51□□□□□ -1.37
VPS13B-208ENST00000521037 DEFB132Q7Z7B7 95 aa6.51□□□□□ -1.37
VPS13B-208ENST00000521037 PROSER2Q86WR7 435 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-208ENST00000521037 SLC26A8Q96RN1 970 aa6.51□□□□□ -1.37
VPS13B-208ENST00000521037 PNPLA6Q8IY17 1366 aa6.51□□□□□ -1.37
VPS13B-208ENST00000521037 WASHC2CQ9Y4E1 1318 aa6.5□□□□□ -1.37
VPS13B-208ENST00000521037 WASLO00401 505 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-208ENST00000521037 C2CD2LO14523 706 aa6.5□□□□□ -1.37
VPS13B-208ENST00000521037 GPR37L1O60883 481 aa6.5□□□□□ -1.37
VPS13B-208ENST00000521037 MAP2K3P46734 347 aa6.5□□□□□ -1.37
VPS13B-208ENST00000521037 SLC27A3Q5K4L6 730 aa6.5□□□□□ -1.37
VPS13B-208ENST00000521037 TIMMDC1Q9NPL8 285 aa6.5□□□□□ -1.37
VPS13B-208ENST00000521037 ZNF777Q9ULD5 760 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-208ENST00000521037 NSFL1CQ9UNZ2 370 aaKnown RBP6.5□□□□□ -1.37
VPS13B-208ENST00000521037 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-208ENST00000521037 PIK3C2BO00750 1634 aa6.5□□□□□ -1.37
VPS13B-208ENST00000521037 PLEKHH2Q8IVE3 1493 aa6.49□□□□□ -1.37
VPS13B-208ENST00000521037 MSH6P52701 1360 aa6.49□□□□□ -1.37
VPS13B-208ENST00000521037 MEX3CQ5U5Q3 659 aaKnown RBP6.49□□□□□ -1.37
VPS13B-208ENST00000521037 TAS1R3Q7RTX0 852 aa6.49□□□□□ -1.37
VPS13B-208ENST00000521037 Q8N3U1 123 aa6.49□□□□□ -1.37
VPS13B-208ENST00000521037 FNBP4Q8N3X1 1017 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-208ENST00000521037 GALNT6Q8NCL4 622 aa6.49□□□□□ -1.37
VPS13B-208ENST00000521037 NLRP3Q96P20 1036 aa6.49□□□□□ -1.37
VPS13B-208ENST00000521037 PCDHB9Q9Y5E1 797 aa6.49□□□□□ -1.37
VPS13B-208ENST00000521037 CASKIN1Q8WXD9 1431 aa6.49□□□□□ -1.37
VPS13B-208ENST00000521037 NCOA3Q9Y6Q9 1424 aa6.49□□□□□ -1.37
VPS13B-208ENST00000521037 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-208ENST00000521037 IL2RAP01589 272 aa6.48□□□□□ -1.37
VPS13B-208ENST00000521037 CENPCQ03188 943 aa6.48□□□□□ -1.37
VPS13B-208ENST00000521037 CYP2U1Q7Z449 544 aa6.48□□□□□ -1.37
VPS13B-208ENST00000521037 ALYREFQ86V81 257 aaKnown RBP6.48□□□□□ -1.37
VPS13B-208ENST00000521037 ARXQ96QS3 562 aa6.48□□□□□ -1.37
VPS13B-208ENST00000521037 KRTAP9-2Q9BYQ4 174 aa6.48□□□□□ -1.37
VPS13B-208ENST00000521037 ARHGEF10LQ9HCE6 1279 aa6.48□□□□□ -1.37
VPS13B-208ENST00000521037 NDFIP2Q9NV92 336 aa6.48□□□□□ -1.37
VPS13B-208ENST00000521037 ASXL1Q8IXJ9 1541 aa6.48□□□□□ -1.37
VPS13B-208ENST00000521037 BLMP54132 1417 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-208ENST00000521037 ARHGAP31Q2M1Z3 1444 aa6.48□□□□□ -1.37
VPS13B-208ENST00000521037 CHD2O14647 1828 aaKnown RBP6.48□□□□□ -1.37
VPS13B-208ENST00000521037 FURINP09958 794 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 YY1P25490 414 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 ITGB7P26010 798 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 TMEM259Q4ZIN3 620 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 RNF20Q5VTR2 975 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 EDARADDQ8WWZ3 215 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 ESYT1Q9BSJ8 1104 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 FHDC1Q9C0D6 1143 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-208ENST00000521037 SUV39H2Q9H5I1 410 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 GOPCQ9HD26 462 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 MKL2Q9ULH7 1088 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 ZFYVE9O95405 1425 aa6.47□□□□□ -1.37
VPS13B-208ENST00000521037 GNRH1P01148 92 aa6.46□□□□□ -1.38
VPS13B-208ENST00000521037 GLI3P10071 1580 aa6.46□□□□□ -1.38
VPS13B-208ENST00000521037 MCCD1P59942 119 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-208ENST00000521037 MST1RQ04912 1400 aa6.46□□□□□ -1.38
VPS13B-208ENST00000521037 ADAMTS13Q76LX8 1427 aa6.46□□□□□ -1.38
VPS13B-208ENST00000521037 DDX17Q92841 729 aaKnown RBP6.46□□□□□ -1.38
VPS13B-208ENST00000521037 XAGE2Q96GT9 111 aa6.46□□□□□ -1.38
VPS13B-208ENST00000521037 GDF2Q9UK05 429 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-208ENST00000521037 GTF3C3Q9Y5Q9 886 aa6.46□□□□□ -1.38
VPS13B-208ENST00000521037 LAMC1P11047 1609 aa6.46□□□□□ -1.38
VPS13B-208ENST00000521037 PTPRUQ92729 1446 aa6.45□□□□□ -1.38
VPS13B-208ENST00000521037 NR1H3Q13133 447 aa6.45□□□□□ -1.38
VPS13B-208ENST00000521037 CNKSR1Q969H4 720 aa6.45□□□□□ -1.38
VPS13B-208ENST00000521037 ATP1B4Q9UN42 357 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-208ENST00000521037 PCDHB11Q9Y5F2 797 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms