RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 PI4KAP1Q8N8J0 262 aa19.73■□□□□ 0.75
HDAC2-209ENST00000520895 ZNF428Q96B54 188 aa19.73■□□□□ 0.75
HDAC2-209ENST00000520895 MYD88Q99836 296 aa19.73■□□□□ 0.75
HDAC2-209ENST00000520895 ISCA1Q9BUE6 129 aa19.73■□□□□ 0.75
HDAC2-209ENST00000520895 KCNA3P22001 575 aa19.72■□□□□ 0.75
HDAC2-209ENST00000520895 NEXNQ0ZGT2 675 aa19.72■□□□□ 0.75
HDAC2-209ENST00000520895 METTL22Q9BUU2 404 aaPredicted RBP19.72■□□□□ 0.75
HDAC2-209ENST00000520895 TRMT112Q9UI30 125 aaKnown RBP19.72■□□□□ 0.75
HDAC2-209ENST00000520895 BCS1LQ9Y276 419 aa19.72■□□□□ 0.75
HDAC2-209ENST00000520895 RNF123Q5XPI4 1314 aa19.72■□□□□ 0.75
HDAC2-209ENST00000520895 GRIN3BO60391 1043 aa19.71■□□□□ 0.75
HDAC2-209ENST00000520895 CT47B1P0C2W7 299 aaPredicted RBP19.71■□□□□ 0.75
HDAC2-209ENST00000520895 YBX3P16989 372 aaKnown RBP eCLIP19.71■□□□□ 0.75
HDAC2-209ENST00000520895 DALRD3Q5D0E6 543 aaKnown RBP19.71■□□□□ 0.75
HDAC2-209ENST00000520895 ZNF622Q969S3 477 aaKnown RBP eCLIP19.71■□□□□ 0.75
HDAC2-209ENST00000520895 COL11A2P13942 1736 aaPredicted RBP19.71■□□□□ 0.75
HDAC2-209ENST00000520895 ADCY9O60503 1353 aa19.7■□□□□ 0.74
HDAC2-209ENST00000520895 TRIM28Q13263 835 aaKnown RBP19.7■□□□□ 0.74
HDAC2-209ENST00000520895 ABCC12Q96J65 1359 aa19.7■□□□□ 0.74
HDAC2-209ENST00000520895 SSH1Q8WYL5 1049 aa19.69■□□□□ 0.74
HDAC2-209ENST00000520895 SH3TC1Q8TE82 1336 aa19.69■□□□□ 0.74
HDAC2-209ENST00000520895 TNRC6CQ9HCJ0 1690 aaKnown RBP19.68■□□□□ 0.74
HDAC2-209ENST00000520895 SRGNP10124 158 aa19.68■□□□□ 0.74
HDAC2-209ENST00000520895 ALDH1L2Q3SY69 923 aa19.68■□□□□ 0.74
HDAC2-209ENST00000520895 MRPL50Q8N5N7 158 aaKnown RBP19.68■□□□□ 0.74
HDAC2-209ENST00000520895 TTLL6Q8N841 843 aa19.68■□□□□ 0.74
HDAC2-209ENST00000520895 CCDC191Q8NCU4 936 aa19.68■□□□□ 0.74
HDAC2-209ENST00000520895 DNAAF4Q8WXU2 420 aa19.68■□□□□ 0.74
HDAC2-209ENST00000520895 MASTLQ96GX5 879 aa19.68■□□□□ 0.74
HDAC2-209ENST00000520895 BCL2L13Q9BXK5 485 aa19.68■□□□□ 0.74
HDAC2-209ENST00000520895 SMC4Q9NTJ3 1288 aa19.68■□□□□ 0.74
HDAC2-209ENST00000520895 CWC25Q9NXE8 425 aaPredicted RBP19.68■□□□□ 0.74
HDAC2-209ENST00000520895 ARFGEF1Q9Y6D6 1849 aa19.67■□□□□ 0.74
HDAC2-209ENST00000520895 CACNA1SQ13698 1873 aa19.67■□□□□ 0.74
HDAC2-209ENST00000520895 STYK1Q6J9G0 422 aa19.67■□□□□ 0.74
HDAC2-209ENST00000520895 NLRP3Q96P20 1036 aa19.67■□□□□ 0.74
HDAC2-209ENST00000520895 RIC1Q4ADV7 1423 aa19.67■□□□□ 0.74
HDAC2-209ENST00000520895 KLRG2A4D1S0 409 aaPredicted RBP19.66■□□□□ 0.74
HDAC2-209ENST00000520895 SLC10A5Q5PT55 438 aa19.66■□□□□ 0.74
HDAC2-209ENST00000520895 CNKSR1Q969H4 720 aa19.66■□□□□ 0.74
HDAC2-209ENST00000520895 FAM89AQ96GI7 184 aa19.66■□□□□ 0.74
HDAC2-209ENST00000520895 NPR1P16066 1061 aa19.65■□□□□ 0.74
HDAC2-209ENST00000520895 RTL5Q5HYW3 569 aaPredicted RBP19.65■□□□□ 0.74
HDAC2-209ENST00000520895 ZBTB38Q8NAP3 1195 aaPredicted RBP19.65■□□□□ 0.74
HDAC2-209ENST00000520895 RPGRQ92834 1020 aaKnown RBP19.65■□□□□ 0.74
HDAC2-209ENST00000520895 F6X3S4 739 aa19.64■□□□□ 0.73
HDAC2-209ENST00000520895 IGKV5-2P06315 115 aa19.64■□□□□ 0.73
HDAC2-209ENST00000520895 HCLS1P14317 486 aaPredicted RBP19.64■□□□□ 0.73
HDAC2-209ENST00000520895 SYNE4Q8N205 404 aa19.64■□□□□ 0.73
HDAC2-209ENST00000520895 PTPRCP08575 1304 aa19.63■□□□□ 0.73
HDAC2-209ENST00000520895 NEURL1BA8MQ27 555 aa19.63■□□□□ 0.73
HDAC2-209ENST00000520895 HSP90B1P14625 803 aaKnown RBP19.63■□□□□ 0.73
HDAC2-209ENST00000520895 CWF19L2Q2TBE0 894 aaKnown RBP19.63■□□□□ 0.73
HDAC2-209ENST00000520895 CRY2Q49AN0 593 aa19.63■□□□□ 0.73
HDAC2-209ENST00000520895 LINS1Q8NG48 757 aa19.63■□□□□ 0.73
HDAC2-209ENST00000520895 LAMB2P55268 1798 aa19.62■□□□□ 0.73
HDAC2-209ENST00000520895 DDX60Q8IY21 1712 aaKnown RBP19.62■□□□□ 0.73
HDAC2-209ENST00000520895 IRS4O14654 1257 aaPredicted RBP19.62■□□□□ 0.73
HDAC2-209ENST00000520895 PCCAP05165 728 aaPredicted RBP19.62■□□□□ 0.73
HDAC2-209ENST00000520895 ALDH1B1P30837 517 aa19.62■□□□□ 0.73
HDAC2-209ENST00000520895 SLC4A10Q6U841 1118 aa19.62■□□□□ 0.73
HDAC2-209ENST00000520895 ARHGAP27Q6ZUM4 889 aa19.62■□□□□ 0.73
HDAC2-209ENST00000520895 SLX4Q8IY92 1834 aa19.61■□□□□ 0.73
HDAC2-209ENST00000520895 RARSP54136 660 aaKnown RBP19.61■□□□□ 0.73
HDAC2-209ENST00000520895 PRPF40BQ6NWY9 871 aaKnown RBP19.61■□□□□ 0.73
HDAC2-209ENST00000520895 C3orf67Q6ZVT6 689 aa19.61■□□□□ 0.73
HDAC2-209ENST00000520895 RBM17Q96I25 401 aaKnown RBP19.61■□□□□ 0.73
HDAC2-209ENST00000520895 JARID2Q92833 1246 aaPredicted RBP19.6■□□□□ 0.73
HDAC2-209ENST00000520895 ZNF219Q9P2Y4 722 aaPredicted RBP19.6■□□□□ 0.73
HDAC2-209ENST00000520895 C21orf2O43822 256 aa19.59■□□□□ 0.73
HDAC2-209ENST00000520895 HOXA10P31260 410 aaPredicted RBP19.59■□□□□ 0.73
HDAC2-209ENST00000520895 GCKRQ14397 625 aa19.59■□□□□ 0.73
HDAC2-209ENST00000520895 BEND3Q5T5X7 828 aa19.59■□□□□ 0.73
HDAC2-209ENST00000520895 CRAMP1Q96RY5 1269 aa19.58■□□□□ 0.72
HDAC2-209ENST00000520895 SRCIN1Q9C0H9 1055 aa19.58■□□□□ 0.72
HDAC2-209ENST00000520895 NOB1Q9ULX3 412 aaKnown RBP19.58■□□□□ 0.72
HDAC2-209ENST00000520895 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
HDAC2-209ENST00000520895 SOGA3Q5TF21 947 aa19.57■□□□□ 0.72
HDAC2-209ENST00000520895 DDX46Q7L014 1031 aaKnown RBP19.57■□□□□ 0.72
HDAC2-209ENST00000520895 UBE3BQ7Z3V4 1068 aa19.57■□□□□ 0.72
HDAC2-209ENST00000520895 YTHDC1Q96MU7 727 aaKnown RBP19.57■□□□□ 0.72
HDAC2-209ENST00000520895 KIF16BQ96L93 1317 aa19.56■□□□□ 0.72
HDAC2-209ENST00000520895 CDHR2Q9BYE9 1310 aa19.56■□□□□ 0.72
HDAC2-209ENST00000520895 H7C1W4 665 aa19.56■□□□□ 0.72
HDAC2-209ENST00000520895 YY1P25490 414 aa19.56■□□□□ 0.72
HDAC2-209ENST00000520895 API5Q9BZZ5 524 aaKnown RBP19.56■□□□□ 0.72
HDAC2-209ENST00000520895 MYH3P11055 1940 aa19.55■□□□□ 0.72
HDAC2-209ENST00000520895 PDE8AO60658 829 aa19.55■□□□□ 0.72
HDAC2-209ENST00000520895 ALDH1L1O75891 902 aa19.55■□□□□ 0.72
HDAC2-209ENST00000520895 SF3B3Q15393 1217 aaKnown RBP19.55■□□□□ 0.72
HDAC2-209ENST00000520895 C9orf78Q9NZ63 289 aaPredicted RBP19.55■□□□□ 0.72
HDAC2-209ENST00000520895 ABCC4O15439 1325 aa19.54■□□□□ 0.72
HDAC2-209ENST00000520895 IPO8O15397 1037 aaKnown RBP19.54■□□□□ 0.72
HDAC2-209ENST00000520895 BCAR3O75815 825 aa19.54■□□□□ 0.72
HDAC2-209ENST00000520895 TMX4Q9H1E5 349 aaPredicted RBP19.54■□□□□ 0.72
HDAC2-209ENST00000520895 GRM8O00222 908 aa19.53■□□□□ 0.72
HDAC2-209ENST00000520895 PPEF1O14829 653 aaPredicted RBP19.53■□□□□ 0.72
HDAC2-209ENST00000520895 CCDC152Q4G0S7 254 aa19.53■□□□□ 0.72
HDAC2-209ENST00000520895 CCDC93Q567U6 631 aa19.53■□□□□ 0.72
HDAC2-209ENST00000520895 FRAT1Q92837 279 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms