RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 CIAPIN1Q6FI81 312 aa17.71■□□□□ 0.43
SRGAP3-212ENST00000520860 ADARB2Q9NS39 739 aaKnown RBP17.71■□□□□ 0.43
SRGAP3-212ENST00000520860 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
SRGAP3-212ENST00000520860 COL4A5P29400 1685 aa17.71■□□□□ 0.42
SRGAP3-212ENST00000520860 KCNQ3O43525 872 aa17.7■□□□□ 0.42
SRGAP3-212ENST00000520860 NIM1KQ8IY84 436 aa17.7■□□□□ 0.42
SRGAP3-212ENST00000520860 EIF4G2P78344 907 aaKnown RBP eCLIP17.69■□□□□ 0.42
SRGAP3-212ENST00000520860 CRY2Q49AN0 593 aa17.69■□□□□ 0.42
SRGAP3-212ENST00000520860 RPGRQ92834 1020 aaKnown RBP17.69■□□□□ 0.42
SRGAP3-212ENST00000520860 ZNF408Q9H9D4 720 aa17.69■□□□□ 0.42
SRGAP3-212ENST00000520860 GPRC5DQ9NZD1 345 aa17.69■□□□□ 0.42
SRGAP3-212ENST00000520860 NOGQ13253 232 aa17.68■□□□□ 0.42
SRGAP3-212ENST00000520860 AMER1Q5JTC6 1135 aaPredicted RBP17.68■□□□□ 0.42
SRGAP3-212ENST00000520860 NYXQ9GZU5 481 aa17.68■□□□□ 0.42
SRGAP3-212ENST00000520860 TIMELESSQ9UNS1 1208 aa17.68■□□□□ 0.42
SRGAP3-212ENST00000520860 CEMIPQ8WUJ3 1361 aa17.67■□□□□ 0.42
SRGAP3-212ENST00000520860 SNRPA1P09661 255 aaKnown RBP17.67■□□□□ 0.42
SRGAP3-212ENST00000520860 SOX10P56693 466 aa17.67■□□□□ 0.42
SRGAP3-212ENST00000520860 PRPF38BQ5VTL8 546 aaKnown RBP17.67■□□□□ 0.42
SRGAP3-212ENST00000520860 GLIS2Q9BZE0 524 aaPredicted RBP17.67■□□□□ 0.42
SRGAP3-212ENST00000520860 PRAMEF22A3QJZ6 481 aa17.66■□□□□ 0.42
SRGAP3-212ENST00000520860 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
SRGAP3-212ENST00000520860 PPIP5K2O43314 1243 aa17.66■□□□□ 0.42
SRGAP3-212ENST00000520860 HSPA5P11021 654 aaKnown RBP17.66■□□□□ 0.42
SRGAP3-212ENST00000520860 ABCC12Q96J65 1359 aa17.66■□□□□ 0.42
SRGAP3-212ENST00000520860 HLFQ16534 295 aa17.65■□□□□ 0.42
SRGAP3-212ENST00000520860 NUTM1Q86Y26 1132 aa17.65■□□□□ 0.42
SRGAP3-212ENST00000520860 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
SRGAP3-212ENST00000520860 NBPF26B4DH59 902 aa17.64■□□□□ 0.41
SRGAP3-212ENST00000520860 TCERG1O14776 1098 aaKnown RBP17.64■□□□□ 0.41
SRGAP3-212ENST00000520860 HOXA10P31260 410 aaPredicted RBP17.64■□□□□ 0.41
SRGAP3-212ENST00000520860 NBPF10Q6P3W6 841 aaKnown RBP17.64■□□□□ 0.41
SRGAP3-212ENST00000520860 NBPF15Q8N660 670 aa17.64■□□□□ 0.41
SRGAP3-212ENST00000520860 NPC1L1Q9UHC9 1359 aa17.64■□□□□ 0.41
SRGAP3-212ENST00000520860 PPEF1O14829 653 aaPredicted RBP17.63■□□□□ 0.41
SRGAP3-212ENST00000520860 AOC3Q16853 763 aa17.63■□□□□ 0.41
SRGAP3-212ENST00000520860 CDC37L1Q7L3B6 337 aa17.63■□□□□ 0.41
SRGAP3-212ENST00000520860 ZC3H15Q8WU90 426 aaKnown RBP17.63■□□□□ 0.41
SRGAP3-212ENST00000520860 RBM17Q96I25 401 aaKnown RBP17.63■□□□□ 0.41
SRGAP3-212ENST00000520860 GMPSP49915 693 aaPredicted RBP17.62■□□□□ 0.41
SRGAP3-212ENST00000520860 HUNKP57058 714 aa17.62■□□□□ 0.41
SRGAP3-212ENST00000520860 CRAMP1Q96RY5 1269 aa17.62■□□□□ 0.41
SRGAP3-212ENST00000520860 ZIC5Q96T25 663 aa17.62■□□□□ 0.41
SRGAP3-212ENST00000520860 VPS33BQ9H267 617 aa17.62■□□□□ 0.41
SRGAP3-212ENST00000520860 PGAP2Q9UHJ9 254 aa17.62■□□□□ 0.41
SRGAP3-212ENST00000520860 ZNRF3Q9ULT6 936 aa17.62■□□□□ 0.41
SRGAP3-212ENST00000520860 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
SRGAP3-212ENST00000520860 TNRC18O15417 2968 aaPredicted RBP17.61■□□□□ 0.41
SRGAP3-212ENST00000520860 CXCL9Q07325 125 aa17.61■□□□□ 0.41
SRGAP3-212ENST00000520860 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
SRGAP3-212ENST00000520860 SAGE1Q9NXZ1 904 aa17.61■□□□□ 0.41
SRGAP3-212ENST00000520860 CDHR2Q9BYE9 1310 aa17.61■□□□□ 0.41
SRGAP3-212ENST00000520860 RIC1Q4ADV7 1423 aa17.61■□□□□ 0.41
SRGAP3-212ENST00000520860 SUPT20HQ8NEM7 779 aa17.6■□□□□ 0.41
SRGAP3-212ENST00000520860 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
SRGAP3-212ENST00000520860 ERVV-1B6SEH8 477 aa17.58■□□□□ 0.4
SRGAP3-212ENST00000520860 RGMBQ6NW40 437 aa17.58■□□□□ 0.4
SRGAP3-212ENST00000520860 SLC51AQ86UW1 340 aa17.58■□□□□ 0.4
SRGAP3-212ENST00000520860 NGEFQ8N5V2 710 aa17.58■□□□□ 0.4
SRGAP3-212ENST00000520860 IBTKQ9P2D0 1353 aaPredicted RBP17.57■□□□□ 0.4
SRGAP3-212ENST00000520860 GPTP24298 496 aa17.57■□□□□ 0.4
SRGAP3-212ENST00000520860 HIRAP54198 1017 aaPredicted RBP17.57■□□□□ 0.4
SRGAP3-212ENST00000520860 TNIP1Q15025 636 aa17.57■□□□□ 0.4
SRGAP3-212ENST00000520860 CC2D1BQ5T0F9 858 aaKnown RBP17.57■□□□□ 0.4
SRGAP3-212ENST00000520860 USP48Q86UV5 1035 aa17.57■□□□□ 0.4
SRGAP3-212ENST00000520860 TRPM4Q8TD43 1214 aa17.57■□□□□ 0.4
SRGAP3-212ENST00000520860 COL3A1P02461 1466 aaPredicted RBP17.56■□□□□ 0.4
SRGAP3-212ENST00000520860 MAP3K15Q6ZN16 1313 aa17.56■□□□□ 0.4
SRGAP3-212ENST00000520860 TRPA1O75762 1119 aa17.56■□□□□ 0.4
SRGAP3-212ENST00000520860 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
SRGAP3-212ENST00000520860 KIF6Q6ZMV9 814 aa17.56■□□□□ 0.4
SRGAP3-212ENST00000520860 CCDC102AQ96A19 550 aa17.56■□□□□ 0.4
SRGAP3-212ENST00000520860 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
SRGAP3-212ENST00000520860 ATP6V0A2Q9Y487 856 aa17.56■□□□□ 0.4
SRGAP3-212ENST00000520860 H7C1D1 291 aa17.55■□□□□ 0.4
SRGAP3-212ENST00000520860 RAD17O75943 681 aa17.55■□□□□ 0.4
SRGAP3-212ENST00000520860 KIF23Q02241 960 aaPredicted RBP17.55■□□□□ 0.4
SRGAP3-212ENST00000520860 MCM10Q7L590 875 aa17.55■□□□□ 0.4
SRGAP3-212ENST00000520860 CTU1Q7Z7A3 348 aaKnown RBP17.55■□□□□ 0.4
SRGAP3-212ENST00000520860 CNOT7Q9UIV1 285 aaKnown RBP17.55■□□□□ 0.4
SRGAP3-212ENST00000520860 FAM155AB1AL88 458 aaPredicted RBP17.54■□□□□ 0.4
SRGAP3-212ENST00000520860 SUSD4Q5VX71 490 aa17.54■□□□□ 0.4
SRGAP3-212ENST00000520860 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
SRGAP3-212ENST00000520860 C2orf69Q8N8R5 385 aa17.54■□□□□ 0.4
SRGAP3-212ENST00000520860 RTFDC1Q9BY42 306 aaPredicted RBP17.54■□□□□ 0.4
SRGAP3-212ENST00000520860 GBA2Q9HCG7 927 aaPredicted RBP17.54■□□□□ 0.4
SRGAP3-212ENST00000520860 RNF186Q9NXI6 227 aa17.54■□□□□ 0.4
SRGAP3-212ENST00000520860 NUP98P52948 1817 aa17.54■□□□□ 0.4
SRGAP3-212ENST00000520860 UBN2Q6ZU65 1347 aa17.53■□□□□ 0.4
SRGAP3-212ENST00000520860 ZNF157P51786 506 aaPredicted RBP17.53■□□□□ 0.4
SRGAP3-212ENST00000520860 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
SRGAP3-212ENST00000520860 KRT26Q7Z3Y9 468 aa17.53■□□□□ 0.4
SRGAP3-212ENST00000520860 MICALL2Q8IY33 904 aa17.53■□□□□ 0.4
SRGAP3-212ENST00000520860 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
SRGAP3-212ENST00000520860 C3orf67Q6ZVT6 689 aa17.52■□□□□ 0.4
SRGAP3-212ENST00000520860 PPP1R42Q7Z4L9 355 aa17.52■□□□□ 0.4
SRGAP3-212ENST00000520860 GCC1Q96CN9 775 aa17.52■□□□□ 0.4
SRGAP3-212ENST00000520860 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
SRGAP3-212ENST00000520860 ZBTB3Q9H5J0 574 aa17.52■□□□□ 0.4
SRGAP3-212ENST00000520860 AKAP11Q9UKA4 1901 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms