RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 DCTN1Q14203 1278 aa11.33□□□□□ -0.6
ZNF260-201ENST00000520608 STYK1Q6J9G0 422 aa11.33□□□□□ -0.6
ZNF260-201ENST00000520608 PRPF40BQ6NWY9 871 aaKnown RBP11.33□□□□□ -0.6
ZNF260-201ENST00000520608 CACNA1SQ13698 1873 aa11.33□□□□□ -0.6
ZNF260-201ENST00000520608 SRGNP10124 158 aa11.32□□□□□ -0.6
ZNF260-201ENST00000520608 SOGA3Q5TF21 947 aa11.32□□□□□ -0.6
ZNF260-201ENST00000520608 JMYQ8N9B5 988 aa11.32□□□□□ -0.6
ZNF260-201ENST00000520608 MASTLQ96GX5 879 aa11.32□□□□□ -0.6
ZNF260-201ENST00000520608 FER1L6Q2WGJ9 1857 aa11.32□□□□□ -0.6
ZNF260-201ENST00000520608 FAM177BA6PVY3 158 aa11.31□□□□□ -0.6
ZNF260-201ENST00000520608 NEFMP07197 916 aa11.31□□□□□ -0.6
ZNF260-201ENST00000520608 CLEC4GQ6UXB4 293 aa11.31□□□□□ -0.6
ZNF260-201ENST00000520608 NIP7Q9Y221 180 aaKnown RBP eCLIP11.31□□□□□ -0.6
ZNF260-201ENST00000520608 LTBP3Q9NS15 1303 aa11.31□□□□□ -0.6
ZNF260-201ENST00000520608 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
ZNF260-201ENST00000520608 POTECB2RU33 542 aa11.3□□□□□ -0.6
ZNF260-201ENST00000520608 NUBP1P53384 320 aa11.3□□□□□ -0.6
ZNF260-201ENST00000520608 IER5LQ5T953 404 aa11.3□□□□□ -0.6
ZNF260-201ENST00000520608 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
ZNF260-201ENST00000520608 MIS18AQ9NYP9 233 aa11.3□□□□□ -0.6
ZNF260-201ENST00000520608 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
ZNF260-201ENST00000520608 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
ZNF260-201ENST00000520608 HTATSF1O43719 755 aaKnown RBP11.29□□□□□ -0.6
ZNF260-201ENST00000520608 ST18O60284 1047 aa11.29□□□□□ -0.6
ZNF260-201ENST00000520608 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
ZNF260-201ENST00000520608 NPR1P16066 1061 aa11.29□□□□□ -0.6
ZNF260-201ENST00000520608 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
ZNF260-201ENST00000520608 TAF7Q15545 349 aaPredicted RBP11.29□□□□□ -0.6
ZNF260-201ENST00000520608 CCDC93Q567U6 631 aa11.29□□□□□ -0.6
ZNF260-201ENST00000520608 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
ZNF260-201ENST00000520608 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
ZNF260-201ENST00000520608 NGEFQ8N5V2 710 aa11.29□□□□□ -0.6
ZNF260-201ENST00000520608 NBPF15Q8N660 670 aa11.29□□□□□ -0.6
ZNF260-201ENST00000520608 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
ZNF260-201ENST00000520608 COL13A1Q5TAT6 717 aaPredicted RBP11.28□□□□□ -0.6
ZNF260-201ENST00000520608 TRIM35Q9UPQ4 493 aa11.28□□□□□ -0.6
ZNF260-201ENST00000520608 LAMB4A4D0S4 1761 aa11.28□□□□□ -0.6
ZNF260-201ENST00000520608 HLFQ16534 295 aa11.27□□□□□ -0.61
ZNF260-201ENST00000520608 ZNF277Q9NRM2 450 aaPredicted RBP11.27□□□□□ -0.61
ZNF260-201ENST00000520608 PCNTO95613 3336 aa11.27□□□□□ -0.61
ZNF260-201ENST00000520608 IQCA1LA6NCM1 817 aa11.26□□□□□ -0.61
ZNF260-201ENST00000520608 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
ZNF260-201ENST00000520608 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
ZNF260-201ENST00000520608 FKBP4Q02790 459 aaKnown RBP eCLIP11.26□□□□□ -0.61
ZNF260-201ENST00000520608 OLFM4Q6UX06 510 aa11.26□□□□□ -0.61
ZNF260-201ENST00000520608 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
ZNF260-201ENST00000520608 RGL2O15211 777 aa11.25□□□□□ -0.61
ZNF260-201ENST00000520608 MYL6BP14649 208 aa11.25□□□□□ -0.61
ZNF260-201ENST00000520608 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
ZNF260-201ENST00000520608 KIF6Q6ZMV9 814 aa11.25□□□□□ -0.61
ZNF260-201ENST00000520608 NUTM1Q86Y26 1132 aa11.25□□□□□ -0.61
ZNF260-201ENST00000520608 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
ZNF260-201ENST00000520608 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
ZNF260-201ENST00000520608 C7orf43Q8WVR3 580 aa11.25□□□□□ -0.61
ZNF260-201ENST00000520608 THUMPD2Q9BTF0 503 aaKnown RBP11.25□□□□□ -0.61
ZNF260-201ENST00000520608 RRP7AQ9Y3A4 280 aaKnown RBP11.25□□□□□ -0.61
ZNF260-201ENST00000520608 ZNF541Q9H0D2 1346 aa11.25□□□□□ -0.61
ZNF260-201ENST00000520608 MAPK8IP3Q9UPT6 1336 aa11.25□□□□□ -0.61
ZNF260-201ENST00000520608 KDM3BQ7LBC6 1761 aa11.24□□□□□ -0.61
ZNF260-201ENST00000520608 KLRG2A4D1S0 409 aaPredicted RBP11.24□□□□□ -0.61
ZNF260-201ENST00000520608 ALDH1B1P30837 517 aa11.24□□□□□ -0.61
ZNF260-201ENST00000520608 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
ZNF260-201ENST00000520608 NYXQ9GZU5 481 aa11.24□□□□□ -0.61
ZNF260-201ENST00000520608 ZBTB3Q9H5J0 574 aa11.24□□□□□ -0.61
ZNF260-201ENST00000520608 MKRN1Q9UHC7 482 aaKnown RBP11.24□□□□□ -0.61
ZNF260-201ENST00000520608 DLG5Q8TDM6 1919 aa11.24□□□□□ -0.61
ZNF260-201ENST00000520608 ABCC12Q96J65 1359 aa11.24□□□□□ -0.61
ZNF260-201ENST00000520608 GPTP24298 496 aa11.23□□□□□ -0.61
ZNF260-201ENST00000520608 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
ZNF260-201ENST00000520608 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
ZNF260-201ENST00000520608 LDHDQ86WU2 507 aa11.23□□□□□ -0.61
ZNF260-201ENST00000520608 RPGRQ92834 1020 aaKnown RBP11.23□□□□□ -0.61
ZNF260-201ENST00000520608 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
ZNF260-201ENST00000520608 TAF1DQ9H5J8 278 aaPredicted RBP11.23□□□□□ -0.61
ZNF260-201ENST00000520608 MAP3K15Q6ZN16 1313 aa11.23□□□□□ -0.61
ZNF260-201ENST00000520608 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
ZNF260-201ENST00000520608 SCN4AP35499 1836 aa11.22□□□□□ -0.61
ZNF260-201ENST00000520608 IARSP41252 1262 aaKnown RBP11.22□□□□□ -0.61
ZNF260-201ENST00000520608 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
ZNF260-201ENST00000520608 TTLL7Q6ZT98 887 aa11.22□□□□□ -0.61
ZNF260-201ENST00000520608 SYNE4Q8N205 404 aa11.22□□□□□ -0.61
ZNF260-201ENST00000520608 FAM212AQ96EL1 285 aa11.22□□□□□ -0.61
ZNF260-201ENST00000520608 PLEKHF1Q96S99 279 aa11.22□□□□□ -0.61
ZNF260-201ENST00000520608 PNNQ9H307 717 aaKnown RBP11.22□□□□□ -0.61
ZNF260-201ENST00000520608 HACL1Q9UJ83 578 aa11.22□□□□□ -0.61
ZNF260-201ENST00000520608 UBN2Q6ZU65 1347 aa11.21□□□□□ -0.61
ZNF260-201ENST00000520608 EPHX2P34913 555 aa11.21□□□□□ -0.61
ZNF260-201ENST00000520608 CRY2Q49AN0 593 aa11.21□□□□□ -0.61
ZNF260-201ENST00000520608 JDP2Q8WYK2 163 aa11.21□□□□□ -0.61
ZNF260-201ENST00000520608 NUP98P52948 1817 aa11.21□□□□□ -0.62
ZNF260-201ENST00000520608 PASKQ96RG2 1323 aa11.2□□□□□ -0.62
ZNF260-201ENST00000520608 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
ZNF260-201ENST00000520608 SUSD4Q5VX71 490 aa11.2□□□□□ -0.62
ZNF260-201ENST00000520608 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
ZNF260-201ENST00000520608 PSMD1Q99460 953 aa11.2□□□□□ -0.62
ZNF260-201ENST00000520608 TSPYL4Q9UJ04 414 aa11.2□□□□□ -0.62
ZNF260-201ENST00000520608 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
ZNF260-201ENST00000520608 CNTNAP1P78357 1384 aa11.19□□□□□ -0.62
ZNF260-201ENST00000520608 IBTKQ9P2D0 1353 aaPredicted RBP11.19□□□□□ -0.62
ZNF260-201ENST00000520608 TMEM88BA6NKF7 163 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms