RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 TNRC6CQ9HCJ0 1690 aaKnown RBP18.24■□□□□ 0.51
VEGFA-221ENST00000520265 IBTKQ9P2D0 1353 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-221ENST00000520265 ATP5J2-PTCD1G3V325 749 aa18.23■□□□□ 0.51
VEGFA-221ENST00000520265 TCIRG1Q13488 830 aa18.23■□□□□ 0.51
VEGFA-221ENST00000520265 TRMT112Q9UI30 125 aaKnown RBP18.23■□□□□ 0.51
VEGFA-221ENST00000520265 DDX58O95786 925 aaKnown RBP18.22■□□□□ 0.51
VEGFA-221ENST00000520265 NLRP10Q86W26 655 aa18.22■□□□□ 0.51
VEGFA-221ENST00000520265 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
VEGFA-221ENST00000520265 ADCY9O60503 1353 aa18.21■□□□□ 0.51
VEGFA-221ENST00000520265 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
VEGFA-221ENST00000520265 NLRP3Q96P20 1036 aa18.21■□□□□ 0.51
VEGFA-221ENST00000520265 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
VEGFA-221ENST00000520265 ARFGEF2Q9Y6D5 1785 aa18.2■□□□□ 0.5
VEGFA-221ENST00000520265 ALDH1B1P30837 517 aa18.2■□□□□ 0.5
VEGFA-221ENST00000520265 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
VEGFA-221ENST00000520265 NCBP3Q53F19 620 aaKnown RBP18.2■□□□□ 0.5
VEGFA-221ENST00000520265 SOGA3Q5TF21 947 aa18.2■□□□□ 0.5
VEGFA-221ENST00000520265 DIEXFQ68CQ4 756 aaKnown RBP18.2■□□□□ 0.5
VEGFA-221ENST00000520265 MYD88Q99836 296 aa18.2■□□□□ 0.5
VEGFA-221ENST00000520265 HCLS1P14317 486 aaPredicted RBP18.19■□□□□ 0.5
VEGFA-221ENST00000520265 LMNB1P20700 586 aa18.19■□□□□ 0.5
VEGFA-221ENST00000520265 CCDC93Q567U6 631 aa18.19■□□□□ 0.5
VEGFA-221ENST00000520265 RBM17Q96I25 401 aaKnown RBP18.19■□□□□ 0.5
VEGFA-221ENST00000520265 TAOK3Q9H2K8 898 aa18.19■□□□□ 0.5
VEGFA-221ENST00000520265 SH3TC1Q8TE82 1336 aa18.19■□□□□ 0.5
VEGFA-221ENST00000520265 CCER2I3L3R5 266 aa18.18■□□□□ 0.5
VEGFA-221ENST00000520265 NFKBIEO00221 500 aa18.17■□□□□ 0.5
VEGFA-221ENST00000520265 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
VEGFA-221ENST00000520265 C3orf67Q6ZVT6 689 aa18.17■□□□□ 0.5
VEGFA-221ENST00000520265 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
VEGFA-221ENST00000520265 TMX4Q9H1E5 349 aaPredicted RBP18.17■□□□□ 0.5
VEGFA-221ENST00000520265 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
VEGFA-221ENST00000520265 RNF123Q5XPI4 1314 aa18.17■□□□□ 0.5
VEGFA-221ENST00000520265 KLRG2A4D1S0 409 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-221ENST00000520265 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
VEGFA-221ENST00000520265 FAM89AQ96GI7 184 aa18.16■□□□□ 0.5
VEGFA-221ENST00000520265 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-221ENST00000520265 PPEF1O14829 653 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-221ENST00000520265 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
VEGFA-221ENST00000520265 CRY2Q49AN0 593 aa18.15■□□□□ 0.5
VEGFA-221ENST00000520265 ISCA1Q9BUE6 129 aa18.15■□□□□ 0.5
VEGFA-221ENST00000520265 RIC1Q4ADV7 1423 aa18.15■□□□□ 0.5
VEGFA-221ENST00000520265 SBF1O95248 1867 aa18.14■□□□□ 0.49
VEGFA-221ENST00000520265 PI4KAP2A4QPH2 592 aa18.14■□□□□ 0.49
VEGFA-221ENST00000520265 FKBP5Q13451 457 aaPredicted RBP18.14■□□□□ 0.49
VEGFA-221ENST00000520265 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.49
VEGFA-221ENST00000520265 PI4KAP1Q8N8J0 262 aa18.14■□□□□ 0.49
VEGFA-221ENST00000520265 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
VEGFA-221ENST00000520265 TIAM2Q8IVF5 1701 aa18.14■□□□□ 0.49
VEGFA-221ENST00000520265 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
VEGFA-221ENST00000520265 G2E3Q7L622 706 aa18.13■□□□□ 0.49
VEGFA-221ENST00000520265 RTKN2Q8IZC4 609 aa18.13■□□□□ 0.49
VEGFA-221ENST00000520265 CWC25Q9NXE8 425 aaPredicted RBP18.13■□□□□ 0.49
VEGFA-221ENST00000520265 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
VEGFA-221ENST00000520265 IRS4O14654 1257 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-221ENST00000520265 FLIIQ13045 1269 aa18.12■□□□□ 0.49
VEGFA-221ENST00000520265 KSR2Q6VAB6 950 aa18.12■□□□□ 0.49
VEGFA-221ENST00000520265 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-221ENST00000520265 JARID2Q92833 1246 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-221ENST00000520265 CRAMP1Q96RY5 1269 aa18.12■□□□□ 0.49
VEGFA-221ENST00000520265 METTL22Q9BUU2 404 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-221ENST00000520265 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
VEGFA-221ENST00000520265 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-221ENST00000520265 VAMP4O75379 141 aa18.11■□□□□ 0.49
VEGFA-221ENST00000520265 PRELPP51888 382 aa18.11■□□□□ 0.49
VEGFA-221ENST00000520265 FKBP4Q02790 459 aaKnown RBP eCLIP18.11■□□□□ 0.49
VEGFA-221ENST00000520265 SLC10A5Q5PT55 438 aa18.11■□□□□ 0.49
VEGFA-221ENST00000520265 MIER1Q8N108 512 aa18.11■□□□□ 0.49
VEGFA-221ENST00000520265 ABCC4O15439 1325 aa18.11■□□□□ 0.49
VEGFA-221ENST00000520265 LAMB2P55268 1798 aa18.1■□□□□ 0.49
VEGFA-221ENST00000520265 HOXA10P31260 410 aaPredicted RBP18.1■□□□□ 0.49
VEGFA-221ENST00000520265 C1QTNF8P60827 252 aa18.1■□□□□ 0.49
VEGFA-221ENST00000520265 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
VEGFA-221ENST00000520265 E9PSI1 815 aa18.09■□□□□ 0.49
VEGFA-221ENST00000520265 HSP90B1P14625 803 aaKnown RBP18.09■□□□□ 0.49
VEGFA-221ENST00000520265 ZBTB38Q8NAP3 1195 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-221ENST00000520265 CCDC191Q8NCU4 936 aa18.09■□□□□ 0.49
VEGFA-221ENST00000520265 C7orf43Q8WVR3 580 aa18.09■□□□□ 0.49
VEGFA-221ENST00000520265 CCDC85AQ96PX6 553 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-221ENST00000520265 ZNF521Q96K83 1311 aa18.08■□□□□ 0.49
VEGFA-221ENST00000520265 ZC3H4Q9UPT8 1303 aaKnown RBP18.08■□□□□ 0.49
VEGFA-221ENST00000520265 TRIM28Q13263 835 aaKnown RBP18.08■□□□□ 0.48
VEGFA-221ENST00000520265 CWF19L2Q2TBE0 894 aaKnown RBP18.08■□□□□ 0.48
VEGFA-221ENST00000520265 DPY19L2Q6NUT2 758 aa18.08■□□□□ 0.48
VEGFA-221ENST00000520265 SLC51AQ86UW1 340 aa18.08■□□□□ 0.48
VEGFA-221ENST00000520265 RRAGCQ9HB90 399 aa18.08■□□□□ 0.48
VEGFA-221ENST00000520265 DDX60Q8IY21 1712 aaKnown RBP18.08■□□□□ 0.48
VEGFA-221ENST00000520265 CC2D2BQ6DHV5 1058 aa18.07■□□□□ 0.48
VEGFA-221ENST00000520265 PCCAP05165 728 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-221ENST00000520265 IARSP41252 1262 aaKnown RBP18.06■□□□□ 0.48
VEGFA-221ENST00000520265 GRAPQ13588 217 aa18.06■□□□□ 0.48
VEGFA-221ENST00000520265 GRAPLQ8TC17 118 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-221ENST00000520265 DNAAF4Q8WXU2 420 aa18.06■□□□□ 0.48
VEGFA-221ENST00000520265 KIF3CO14782 793 aa18.05■□□□□ 0.48
VEGFA-221ENST00000520265 DPP8Q6V1X1 898 aaPredicted RBP18.05■□□□□ 0.48
VEGFA-221ENST00000520265 JDP2Q8WYK2 163 aa18.05■□□□□ 0.48
VEGFA-221ENST00000520265 CDCA7LQ96GN5 454 aa18.05■□□□□ 0.48
VEGFA-221ENST00000520265 ATP6V0A2Q9Y487 856 aa18.05■□□□□ 0.48
VEGFA-221ENST00000520265 GLTPD2A6NH11 291 aa18.04■□□□□ 0.48
VEGFA-221ENST00000520265 NEURL1BA8MQ27 555 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms