RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ELOA3CA0A087WX78 387 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 A6NJY4 79 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 ELOA3DA6NLF2 546 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 CDK2AP1O14519 115 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 STAU1O95793 577 aaKnown RBP6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 ALAS2P22557 587 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 GTF2E1P29083 439 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 MTFR1Q15390 333 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 TLR1Q15399 786 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 ELOA3BQ3SY89 546 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 ZNF468Q5VIY5 522 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 HOMEZQ8IX15 550 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 ELOA3Q8NG57 546 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 ZSCAN10Q96SZ4 725 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 HINFPQ9BQA5 517 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 PRDM6Q9NQX0 595 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 SERTAD1Q9UHV2 236 aa6.2□□□□□ -1.42
HMGB1P41-201ENST00000520234 TMEM88BA6NKF7 163 aa6.19□□□□□ -1.42
HMGB1P41-201ENST00000520234 FAM69CQ0P6D2 419 aa6.19□□□□□ -1.42
HMGB1P41-201ENST00000520234 TSEN2Q8NCE0 465 aaKnown RBP6.19□□□□□ -1.42
HMGB1P41-201ENST00000520234 GAS2L2Q8NHY3 880 aa6.19□□□□□ -1.42
HMGB1P41-201ENST00000520234 FHDC1Q9C0D6 1143 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P41-201ENST00000520234 SCHIP1Q9P0W5 487 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P41-201ENST00000520234 EPHA4P54764 986 aa6.18□□□□□ -1.42
HMGB1P41-201ENST00000520234 NRG1Q02297 640 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P41-201ENST00000520234 COL9A3Q14050 684 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P41-201ENST00000520234 B4GALNT3Q6L9W6 998 aa6.18□□□□□ -1.42
HMGB1P41-201ENST00000520234 PPARGC1BQ86YN6 1023 aaKnown RBP6.18□□□□□ -1.42
HMGB1P41-201ENST00000520234 TNS4Q8IZW8 715 aa6.18□□□□□ -1.42
HMGB1P41-201ENST00000520234 CLP1Q92989 425 aaKnown RBP6.18□□□□□ -1.42
HMGB1P41-201ENST00000520234 ATXN7O15265 892 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P41-201ENST00000520234 PCBP4P57723 403 aaKnown RBP6.17□□□□□ -1.42
HMGB1P41-201ENST00000520234 C4orf17Q53FE4 359 aa6.17□□□□□ -1.42
HMGB1P41-201ENST00000520234 TMEM214Q6NUQ4 689 aaKnown RBP6.17□□□□□ -1.42
HMGB1P41-201ENST00000520234 NLRP8Q86W28 1048 aa6.17□□□□□ -1.42
HMGB1P41-201ENST00000520234 ZCCHC2Q9C0B9 1178 aaKnown RBP6.17□□□□□ -1.42
HMGB1P41-201ENST00000520234 CD33P20138 364 aa6.16□□□□□ -1.42
HMGB1P41-201ENST00000520234 IGFBP4P22692 258 aa6.16□□□□□ -1.42
HMGB1P41-201ENST00000520234 WEE1P30291 646 aa6.16□□□□□ -1.42
HMGB1P41-201ENST00000520234 STAG2Q8N3U4 1231 aa6.16□□□□□ -1.42
HMGB1P41-201ENST00000520234 RHBDD1Q8TEB9 315 aa6.16□□□□□ -1.42
HMGB1P41-201ENST00000520234 TRAIPQ9BWF2 469 aa6.16□□□□□ -1.42
HMGB1P41-201ENST00000520234 SSBP4Q9BWG4 385 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P41-201ENST00000520234 NIFKQ9BYG3 293 aaKnown RBP6.16□□□□□ -1.42
HMGB1P41-201ENST00000520234 IQSEC3Q9UPP2 1182 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P41-201ENST00000520234 M0R082 166 aa6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 MAPTP10636 758 aaKnown RBP6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 PDIA4P13667 645 aaKnown RBP6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 PSMA6P60900 246 aaKnown RBP6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 TNP2Q05952 138 aa6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 TEAD4Q15561 434 aa6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 SLC9A9Q8IVB4 645 aa6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 ZNF417Q8TAU3 575 aa6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 LENG1Q96BZ8 264 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 ZNF587Q96SQ5 575 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 MDFIQ99750 246 aa6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 TSPAN10Q9H1Z9 355 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 PRR12Q9ULL5 1215 aa6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 CHMP3Q9Y3E7 222 aa6.15□□□□□ -1.42
HMGB1P41-201ENST00000520234 ATAD2Q6PL18 1390 aa6.15□□□□□ -1.43
HMGB1P41-201ENST00000520234 FOXO3O43524 673 aa6.14□□□□□ -1.43
HMGB1P41-201ENST00000520234 SELPP16109 830 aa6.14□□□□□ -1.43
HMGB1P41-201ENST00000520234 ATP2B4P23634 1241 aa6.14□□□□□ -1.43
HMGB1P41-201ENST00000520234 OCLNQ16625 522 aa6.14□□□□□ -1.43
HMGB1P41-201ENST00000520234 C1orf216Q8TAB5 229 aa6.14□□□□□ -1.43
HMGB1P41-201ENST00000520234 SCG3Q8WXD2 468 aaKnown RBP6.14□□□□□ -1.43
HMGB1P41-201ENST00000520234 SERTM1A2A2V5 107 aa6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 DCDC2BA2VCK2 349 aa6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 C21orf2O43822 256 aa6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 PPP1R12BO60237 982 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 PRMT3O60678 531 aa6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 SSFA2P28290 1259 aa6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 HIRAP54198 1017 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 ZNF295-AS1Q8N0V1 137 aa6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 CABP1Q9NZU7 370 aa6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 CXXC1Q9P0U4 656 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 HCN2Q9UL51 889 aa6.13□□□□□ -1.43
HMGB1P41-201ENST00000520234 BRD1O95696 1058 aa6.12□□□□□ -1.43
HMGB1P41-201ENST00000520234 NID1P14543 1247 aa6.12□□□□□ -1.43
HMGB1P41-201ENST00000520234 CD97P48960 835 aa6.12□□□□□ -1.43
HMGB1P41-201ENST00000520234 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
HMGB1P41-201ENST00000520234 POTEAQ6S8J7 498 aa6.12□□□□□ -1.43
HMGB1P41-201ENST00000520234 SLC51AQ86UW1 340 aa6.12□□□□□ -1.43
HMGB1P41-201ENST00000520234 COL26A1Q96A83 441 aa6.12□□□□□ -1.43
HMGB1P41-201ENST00000520234 PRIMPOLQ96LW4 560 aa6.12□□□□□ -1.43
HMGB1P41-201ENST00000520234 OAS3Q9Y6K5 1087 aaKnown RBP6.12□□□□□ -1.43
HMGB1P41-201ENST00000520234 NOS2P35228 1153 aa6.11□□□□□ -1.43
HMGB1P41-201ENST00000520234 NBPF1Q3BBV0 1214 aa6.11□□□□□ -1.43
HMGB1P41-201ENST00000520234 TBCELQ5QJ74 424 aa6.11□□□□□ -1.43
HMGB1P41-201ENST00000520234 L3MBTL2Q969R5 705 aa6.11□□□□□ -1.43
HMGB1P41-201ENST00000520234 VTI1AQ96AJ9 217 aa6.11□□□□□ -1.43
HMGB1P41-201ENST00000520234 C2orf49Q9BVC5 232 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P41-201ENST00000520234 SLAIN2Q9P270 581 aa6.11□□□□□ -1.43
HMGB1P41-201ENST00000520234 MTMR7Q9Y216 660 aa6.11□□□□□ -1.43
HMGB1P41-201ENST00000520234 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
HMGB1P41-201ENST00000520234 CARNS1A5YM72 827 aa6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 ADARB2-AS1A8MUL3 147 aa6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 PATL2C9JE40 543 aaKnown RBP6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 EML1O00423 815 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms