RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 YTHDC1Q96MU7 727 aaKnown RBP21.95■■□□□ 1.1
CLK4-204ENST00000520126 ZBED9Q6R2W3 1325 aa21.95■■□□□ 1.1
CLK4-204ENST00000520126 NTSR2O95665 410 aa21.94■■□□□ 1.1
CLK4-204ENST00000520126 METTL22Q9BUU2 404 aaPredicted RBP21.94■■□□□ 1.1
CLK4-204ENST00000520126 NRXN2Q9P2S2 1712 aa21.93■■□□□ 1.1
CLK4-204ENST00000520126 YBX3P16989 372 aaKnown RBP eCLIP21.93■■□□□ 1.1
CLK4-204ENST00000520126 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
CLK4-204ENST00000520126 ISCA1Q9BUE6 129 aa21.93■■□□□ 1.1
CLK4-204ENST00000520126 SMC4Q9NTJ3 1288 aa21.93■■□□□ 1.1
CLK4-204ENST00000520126 ZNF219Q9P2Y4 722 aaPredicted RBP21.93■■□□□ 1.1
CLK4-204ENST00000520126 KCNA3P22001 575 aa21.92■■□□□ 1.1
CLK4-204ENST00000520126 DALRD3Q5D0E6 543 aaKnown RBP21.92■■□□□ 1.1
CLK4-204ENST00000520126 KIF13BQ9NQT8 1826 aa21.92■■□□□ 1.1
CLK4-204ENST00000520126 ADCY9O60503 1353 aa21.91■■□□□ 1.1
CLK4-204ENST00000520126 F6X3S4 739 aa21.91■■□□□ 1.1
CLK4-204ENST00000520126 HCLS1P14317 486 aaPredicted RBP21.91■■□□□ 1.1
CLK4-204ENST00000520126 SLC4A10Q6U841 1118 aa21.91■■□□□ 1.1
CLK4-204ENST00000520126 SYNE4Q8N205 404 aa21.91■■□□□ 1.1
CLK4-204ENST00000520126 MRPL50Q8N5N7 158 aaKnown RBP21.91■■□□□ 1.1
CLK4-204ENST00000520126 DNAAF4Q8WXU2 420 aa21.91■■□□□ 1.1
CLK4-204ENST00000520126 JARID2Q92833 1246 aaPredicted RBP21.91■■□□□ 1.1
CLK4-204ENST00000520126 FAM89AQ96GI7 184 aa21.91■■□□□ 1.1
CLK4-204ENST00000520126 SH3TC1Q8TE82 1336 aa21.91■■□□□ 1.1
CLK4-204ENST00000520126 ABCC12Q96J65 1359 aa21.91■■□□□ 1.1
CLK4-204ENST00000520126 ARFGEF2Q9Y6D5 1785 aa21.9■■□□□ 1.1
CLK4-204ENST00000520126 CWC25Q9NXE8 425 aaPredicted RBP21.9■■□□□ 1.1
CLK4-204ENST00000520126 PDZRN3Q9UPQ7 1066 aa21.9■■□□□ 1.1
CLK4-204ENST00000520126 GRIN3BO60391 1043 aa21.89■■□□□ 1.1
CLK4-204ENST00000520126 CWF19L2Q2TBE0 894 aaKnown RBP21.89■■□□□ 1.1
CLK4-204ENST00000520126 TTLL6Q8N841 843 aa21.89■■□□□ 1.1
CLK4-204ENST00000520126 RPGRQ92834 1020 aaKnown RBP21.89■■□□□ 1.1
CLK4-204ENST00000520126 NLRP3Q96P20 1036 aa21.89■■□□□ 1.1
CLK4-204ENST00000520126 CT47B1P0C2W7 299 aaPredicted RBP21.88■■□□□ 1.09
CLK4-204ENST00000520126 MASTLQ96GX5 879 aa21.88■■□□□ 1.09
CLK4-204ENST00000520126 IBTKQ9P2D0 1353 aaPredicted RBP21.88■■□□□ 1.09
CLK4-204ENST00000520126 ANKRD36CQ5JPF3 1778 aa21.88■■□□□ 1.09
CLK4-204ENST00000520126 SRGNP10124 158 aa21.87■■□□□ 1.09
CLK4-204ENST00000520126 ALDH1L2Q3SY69 923 aa21.87■■□□□ 1.09
CLK4-204ENST00000520126 ARHGAP27Q6ZUM4 889 aa21.87■■□□□ 1.09
CLK4-204ENST00000520126 CCDC191Q8NCU4 936 aa21.87■■□□□ 1.09
CLK4-204ENST00000520126 IGKV5-2P06315 115 aa21.86■■□□□ 1.09
CLK4-204ENST00000520126 NPR1P16066 1061 aa21.86■■□□□ 1.09
CLK4-204ENST00000520126 TRIM28Q13263 835 aaKnown RBP21.86■■□□□ 1.09
CLK4-204ENST00000520126 ANKRD31Q8N7Z5 1873 aa21.86■■□□□ 1.09
CLK4-204ENST00000520126 STYK1Q6J9G0 422 aa21.85■■□□□ 1.09
CLK4-204ENST00000520126 CNKSR1Q969H4 720 aa21.85■■□□□ 1.09
CLK4-204ENST00000520126 KIAA1551Q9HCM1 1747 aa21.85■■□□□ 1.09
CLK4-204ENST00000520126 NEURL1BA8MQ27 555 aa21.84■■□□□ 1.09
CLK4-204ENST00000520126 IRS4O14654 1257 aaPredicted RBP21.84■■□□□ 1.09
CLK4-204ENST00000520126 C3orf67Q6ZVT6 689 aa21.84■■□□□ 1.09
CLK4-204ENST00000520126 ZBTB38Q8NAP3 1195 aaPredicted RBP21.84■■□□□ 1.09
CLK4-204ENST00000520126 RNF123Q5XPI4 1314 aa21.84■■□□□ 1.09
CLK4-204ENST00000520126 RARSP54136 660 aaKnown RBP21.83■■□□□ 1.09
CLK4-204ENST00000520126 SLC10A5Q5PT55 438 aa21.83■■□□□ 1.09
CLK4-204ENST00000520126 RBM17Q96I25 401 aaKnown RBP21.83■■□□□ 1.09
CLK4-204ENST00000520126 NOB1Q9ULX3 412 aaKnown RBP21.83■■□□□ 1.09
CLK4-204ENST00000520126 CACNA1FO60840 1977 aa21.83■■□□□ 1.09
CLK4-204ENST00000520126 C21orf2O43822 256 aa21.82■■□□□ 1.08
CLK4-204ENST00000520126 LINS1Q8NG48 757 aa21.82■■□□□ 1.08
CLK4-204ENST00000520126 PTPRCP08575 1304 aa21.82■■□□□ 1.08
CLK4-204ENST00000520126 PCCAP05165 728 aaPredicted RBP21.81■■□□□ 1.08
CLK4-204ENST00000520126 ALDH1B1P30837 517 aa21.81■■□□□ 1.08
CLK4-204ENST00000520126 PRPF40BQ6NWY9 871 aaKnown RBP21.81■■□□□ 1.08
CLK4-204ENST00000520126 FRAT1Q92837 279 aaPredicted RBP21.81■■□□□ 1.08
CLK4-204ENST00000520126 TNRC6CQ9HCJ0 1690 aaKnown RBP21.81■■□□□ 1.08
CLK4-204ENST00000520126 KLRG2A4D1S0 409 aaPredicted RBP21.8■■□□□ 1.08
CLK4-204ENST00000520126 GCKRQ14397 625 aa21.8■■□□□ 1.08
CLK4-204ENST00000520126 UBE3BQ7Z3V4 1068 aa21.8■■□□□ 1.08
CLK4-204ENST00000520126 CCDC85AQ96PX6 553 aaPredicted RBP21.8■■□□□ 1.08
CLK4-204ENST00000520126 SRCIN1Q9C0H9 1055 aa21.8■■□□□ 1.08
CLK4-204ENST00000520126 COL11A2P13942 1736 aaPredicted RBP21.8■■□□□ 1.08
CLK4-204ENST00000520126 BCAR3O75815 825 aa21.8■■□□□ 1.08
CLK4-204ENST00000520126 HSP90B1P14625 803 aaKnown RBP21.8■■□□□ 1.08
CLK4-204ENST00000520126 BEND3Q5T5X7 828 aa21.8■■□□□ 1.08
CLK4-204ENST00000520126 DDX46Q7L014 1031 aaKnown RBP21.8■■□□□ 1.08
CLK4-204ENST00000520126 CRY2Q49AN0 593 aa21.79■■□□□ 1.08
CLK4-204ENST00000520126 C9orf78Q9NZ63 289 aaPredicted RBP21.79■■□□□ 1.08
CLK4-204ENST00000520126 PDE8AO60658 829 aa21.77■■□□□ 1.07
CLK4-204ENST00000520126 KIF16BQ96L93 1317 aa21.76■■□□□ 1.07
CLK4-204ENST00000520126 YY1P25490 414 aa21.76■■□□□ 1.07
CLK4-204ENST00000520126 BRCA1P38398 1863 aaKnown RBP21.76■■□□□ 1.07
CLK4-204ENST00000520126 CACNA1SQ13698 1873 aa21.76■■□□□ 1.07
CLK4-204ENST00000520126 RIC1Q4ADV7 1423 aa21.76■■□□□ 1.07
CLK4-204ENST00000520126 API5Q9BZZ5 524 aaKnown RBP21.76■■□□□ 1.07
CLK4-204ENST00000520126 TMX4Q9H1E5 349 aaPredicted RBP21.76■■□□□ 1.07
CLK4-204ENST00000520126 DLEC1Q9Y238 1755 aa21.75■■□□□ 1.07
CLK4-204ENST00000520126 H7C1W4 665 aa21.75■■□□□ 1.07
CLK4-204ENST00000520126 PPEF1O14829 653 aaPredicted RBP21.75■■□□□ 1.07
CLK4-204ENST00000520126 IPO8O15397 1037 aaKnown RBP21.75■■□□□ 1.07
CLK4-204ENST00000520126 HOXA10P31260 410 aaPredicted RBP21.75■■□□□ 1.07
CLK4-204ENST00000520126 RASSF7Q02833 373 aa21.75■■□□□ 1.07
CLK4-204ENST00000520126 OLFM4Q6UX06 510 aa21.75■■□□□ 1.07
CLK4-204ENST00000520126 CRAMP1Q96RY5 1269 aa21.75■■□□□ 1.07
CLK4-204ENST00000520126 ABCC4O15439 1325 aa21.74■■□□□ 1.07
CLK4-204ENST00000520126 ALDH1L1O75891 902 aa21.74■■□□□ 1.07
CLK4-204ENST00000520126 CCDC152Q4G0S7 254 aa21.74■■□□□ 1.07
CLK4-204ENST00000520126 CDHR2Q9BYE9 1310 aa21.73■■□□□ 1.07
CLK4-204ENST00000520126 SF3B3Q15393 1217 aaKnown RBP21.73■■□□□ 1.07
CLK4-204ENST00000520126 CHMP3Q9Y3E7 222 aa21.73■■□□□ 1.07
CLK4-204ENST00000520126 SLX4Q8IY92 1834 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms