RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 NDUFB5O43674 189 aa9.54□□□□□ -0.88
NPM1-206ENST00000519955 MZF1P28698 734 aaPredicted RBP9.54□□□□□ -0.88
NPM1-206ENST00000519955 KCNQ4P56696 695 aa9.54□□□□□ -0.88
NPM1-206ENST00000519955 TNP2Q05952 138 aa9.54□□□□□ -0.88
NPM1-206ENST00000519955 CCDC27Q2M243 656 aa9.54□□□□□ -0.88
NPM1-206ENST00000519955 ATCAYQ86WG3 371 aa9.54□□□□□ -0.88
NPM1-206ENST00000519955 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
NPM1-206ENST00000519955 BRPF3Q9ULD4 1205 aa9.54□□□□□ -0.88
NPM1-206ENST00000519955 DCDC2BA2VCK2 349 aa9.53□□□□□ -0.88
NPM1-206ENST00000519955 BNIP3LO60238 219 aa9.53□□□□□ -0.88
NPM1-206ENST00000519955 FZD6O60353 706 aa9.53□□□□□ -0.88
NPM1-206ENST00000519955 RPLP1P05386 114 aaKnown RBP9.53□□□□□ -0.88
NPM1-206ENST00000519955 MAPTP10636 758 aaKnown RBP9.53□□□□□ -0.88
NPM1-206ENST00000519955 PCSK2P16519 638 aa9.53□□□□□ -0.88
NPM1-206ENST00000519955 USP5P45974 858 aa9.53□□□□□ -0.88
NPM1-206ENST00000519955 EDEM1Q92611 657 aa9.53□□□□□ -0.88
NPM1-206ENST00000519955 C11orf16Q9NQ32 467 aa9.53□□□□□ -0.88
NPM1-206ENST00000519955 DCTN4Q9UJW0 460 aa9.53□□□□□ -0.88
NPM1-206ENST00000519955 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
NPM1-206ENST00000519955 VEGFBP49765 207 aa9.52□□□□□ -0.89
NPM1-206ENST00000519955 MARSP56192 900 aaKnown RBP9.52□□□□□ -0.89
NPM1-206ENST00000519955 RGL4Q8IZJ4 473 aa9.52□□□□□ -0.89
NPM1-206ENST00000519955 GPR152Q8TDT2 470 aa9.52□□□□□ -0.89
NPM1-206ENST00000519955 SLC16A10Q8TF71 515 aa9.52□□□□□ -0.89
NPM1-206ENST00000519955 ABHD17AQ96GS6 310 aa9.52□□□□□ -0.89
NPM1-206ENST00000519955 CITED4Q96RK1 184 aa9.52□□□□□ -0.89
NPM1-206ENST00000519955 PODXL2Q9NZ53 605 aa9.52□□□□□ -0.89
NPM1-206ENST00000519955 KCNH4Q9UQ05 1017 aa9.52□□□□□ -0.89
NPM1-206ENST00000519955 RTCBQ9Y3I0 505 aaKnown RBP9.52□□□□□ -0.89
NPM1-206ENST00000519955 PDGFAP04085 211 aa9.51□□□□□ -0.89
NPM1-206ENST00000519955 VSIG8P0DPA2 414 aa9.51□□□□□ -0.89
NPM1-206ENST00000519955 DNM1Q05193 864 aaKnown RBP9.51□□□□□ -0.89
NPM1-206ENST00000519955 MARK1Q9P0L2 795 aa9.51□□□□□ -0.89
NPM1-206ENST00000519955 POLIQ9UNA4 740 aa9.51□□□□□ -0.89
NPM1-206ENST00000519955 MAPK1P28482 360 aa9.5□□□□□ -0.89
NPM1-206ENST00000519955 INSM1Q01101 510 aaPredicted RBP9.5□□□□□ -0.89
NPM1-206ENST00000519955 TTC16Q8NEE8 873 aa9.5□□□□□ -0.89
NPM1-206ENST00000519955 NUDT16Q96DE0 195 aaKnown RBP9.5□□□□□ -0.89
NPM1-206ENST00000519955 CCDC87Q9NVE4 849 aa9.5□□□□□ -0.89
NPM1-206ENST00000519955 FNDC3AQ9Y2H6 1198 aaKnown RBP9.5□□□□□ -0.89
NPM1-206ENST00000519955 GPR25O00155 361 aa9.49□□□□□ -0.89
NPM1-206ENST00000519955 FGFR3P22607 806 aa9.49□□□□□ -0.89
NPM1-206ENST00000519955 SFSWAPQ12872 951 aaKnown RBP9.49□□□□□ -0.89
NPM1-206ENST00000519955 FAM182BQ5T319 152 aa9.49□□□□□ -0.89
NPM1-206ENST00000519955 CMTR1Q8N1G2 835 aaKnown RBP9.49□□□□□ -0.89
NPM1-206ENST00000519955 RBCK1Q9BYM8 510 aa9.49□□□□□ -0.89
NPM1-206ENST00000519955 CCDC9Q9Y3X0 531 aaKnown RBP9.49□□□□□ -0.89
NPM1-206ENST00000519955 GRNP28799 593 aaKnown RBP9.48□□□□□ -0.89
NPM1-206ENST00000519955 MFAP1P55081 439 aaKnown RBP9.48□□□□□ -0.89
NPM1-206ENST00000519955 EHHADHQ08426 723 aa9.48□□□□□ -0.89
NPM1-206ENST00000519955 PDE3BQ13370 1112 aa9.48□□□□□ -0.89
NPM1-206ENST00000519955 ZSCAN29Q8IWY8 852 aaPredicted RBP9.48□□□□□ -0.89
NPM1-206ENST00000519955 GJD3Q8N144 294 aa9.48□□□□□ -0.89
NPM1-206ENST00000519955 USP20Q9Y2K6 914 aa9.48□□□□□ -0.89
NPM1-206ENST00000519955 KCNMB2Q9Y691 235 aa9.48□□□□□ -0.89
NPM1-206ENST00000519955 LOC100996750A0A140TA64 210 aa9.47□□□□□ -0.89
NPM1-206ENST00000519955 EGFRP00533 1210 aa9.47□□□□□ -0.89
NPM1-206ENST00000519955 IRF7Q92985 503 aa9.47□□□□□ -0.89
NPM1-206ENST00000519955 KRTAP4-6Q9BYQ5 205 aa9.47□□□□□ -0.89
NPM1-206ENST00000519955 EFCC1Q9HA90 598 aa9.47□□□□□ -0.89
NPM1-206ENST00000519955 STRN4Q9NRL3 753 aa9.47□□□□□ -0.89
NPM1-206ENST00000519955 UBAP1LF5GYI3 381 aa9.46□□□□□ -0.9
NPM1-206ENST00000519955 CD33P20138 364 aa9.46□□□□□ -0.9
NPM1-206ENST00000519955 ASB16Q96NS5 453 aa9.46□□□□□ -0.9
NPM1-206ENST00000519955 XYLBO75191 536 aa9.45□□□□□ -0.9
NPM1-206ENST00000519955 ERCC3P19447 782 aa9.45□□□□□ -0.9
NPM1-206ENST00000519955 SPEM2Q0P670 501 aa9.45□□□□□ -0.9
NPM1-206ENST00000519955 CCINQ13939 588 aa9.45□□□□□ -0.9
NPM1-206ENST00000519955 TRIP4Q15650 581 aaPredicted RBP9.45□□□□□ -0.9
NPM1-206ENST00000519955 C8orf34Q49A92 452 aa9.45□□□□□ -0.9
NPM1-206ENST00000519955 GPR161Q8N6U8 529 aaKnown RBP9.45□□□□□ -0.9
NPM1-206ENST00000519955 TMC1Q8TDI8 760 aa9.45□□□□□ -0.9
NPM1-206ENST00000519955 DMRTB1Q96MA1 342 aa9.45□□□□□ -0.9
NPM1-206ENST00000519955 FAM129BQ96TA1 746 aa9.45□□□□□ -0.9
NPM1-206ENST00000519955 HCN2Q9UL51 889 aa9.45□□□□□ -0.9
NPM1-206ENST00000519955 MX2P20592 715 aa9.44□□□□□ -0.9
NPM1-206ENST00000519955 GAS6Q14393 721 aa9.44□□□□□ -0.9
NPM1-206ENST00000519955 PDE12Q6L8Q7 609 aaKnown RBP9.44□□□□□ -0.9
NPM1-206ENST00000519955 XKR5Q6UX68 686 aa9.44□□□□□ -0.9
NPM1-206ENST00000519955 GSX2Q9BZM3 304 aa9.44□□□□□ -0.9
NPM1-206ENST00000519955 GGNBP2Q9H3C7 697 aa9.44□□□□□ -0.9
NPM1-206ENST00000519955 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
NPM1-206ENST00000519955 ERBB4Q15303 1308 aa9.43□□□□□ -0.9
NPM1-206ENST00000519955 BMP4P12644 408 aa9.43□□□□□ -0.9
NPM1-206ENST00000519955 CTBSQ01459 385 aa9.43□□□□□ -0.9
NPM1-206ENST00000519955 NEUROD1Q13562 356 aa9.43□□□□□ -0.9
NPM1-206ENST00000519955 DNAJC14Q6Y2X3 702 aaPredicted RBP9.43□□□□□ -0.9
NPM1-206ENST00000519955 TMC7Q7Z402 723 aa9.43□□□□□ -0.9
NPM1-206ENST00000519955 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
NPM1-206ENST00000519955 ZNF438Q7Z4V0 828 aa9.42□□□□□ -0.9
NPM1-206ENST00000519955 NLRP13Q86W25 1043 aa9.42□□□□□ -0.9
NPM1-206ENST00000519955 PNMA5Q96PV4 448 aa9.42□□□□□ -0.9
NPM1-206ENST00000519955 COL25A1Q9BXS0 654 aaPredicted RBP9.42□□□□□ -0.9
NPM1-206ENST00000519955 GRIN2CQ14957 1233 aa9.41□□□□□ -0.9
NPM1-206ENST00000519955 SLC30A3Q99726 388 aa9.41□□□□□ -0.9
NPM1-206ENST00000519955 PRR12Q9ULL5 1215 aa9.41□□□□□ -0.9
NPM1-206ENST00000519955 SASH3O75995 380 aa9.4□□□□□ -0.9
NPM1-206ENST00000519955 NEFLP07196 543 aa9.4□□□□□ -0.9
NPM1-206ENST00000519955 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
NPM1-206ENST00000519955 MAP2K3P46734 347 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms