RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 NLRP10Q86W26 655 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 NUTM1Q86Y26 1132 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 PI4KAP1Q8N8J0 262 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
HPS4-218ENST00000519774 NYXQ9GZU5 481 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 ABCC12Q96J65 1359 aa15.13■□□□□ 0.01
HPS4-218ENST00000519774 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
HPS4-218ENST00000519774 TNRC6CQ9HCJ0 1690 aaKnown RBP15.13■□□□□ 0.01
HPS4-218ENST00000519774 CAPN15O75808 1086 aa15.13■□□□□ 0.01
HPS4-218ENST00000519774 NTSR2O95665 410 aa15.13■□□□□ 0.01
HPS4-218ENST00000519774 CT47B1P0C2W7 299 aaPredicted RBP15.13■□□□□ 0.01
HPS4-218ENST00000519774 COL11A2P13942 1736 aaPredicted RBP15.13■□□□□ 0.01
HPS4-218ENST00000519774 DPEP1P16444 411 aa15.13■□□□□ 0.01
HPS4-218ENST00000519774 TGFB2P61812 414 aa15.13■□□□□ 0.01
HPS4-218ENST00000519774 PPP1R42Q7Z4L9 355 aa15.13■□□□□ 0.01
HPS4-218ENST00000519774 SMC4Q9NTJ3 1288 aa15.13■□□□□ 0.01
HPS4-218ENST00000519774 DLEC1Q9Y238 1755 aa15.12■□□□□ 0.01
HPS4-218ENST00000519774 ERFEQ4G0M1 354 aa15.12■□□□□ 0.01
HPS4-218ENST00000519774 C2CD5Q86YS7 1000 aa15.12■□□□□ 0.01
HPS4-218ENST00000519774 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
HPS4-218ENST00000519774 ISCA1Q9BUE6 129 aa15.12■□□□□ 0.01
HPS4-218ENST00000519774 METTL22Q9BUU2 404 aaPredicted RBP15.12■□□□□ 0.01
HPS4-218ENST00000519774 UTP14AQ9BVJ6 771 aaKnown RBP15.12■□□□□ 0.01
HPS4-218ENST00000519774 PDE6BP35913 854 aa15.11■□□□□ 0.01
HPS4-218ENST00000519774 NEXNQ0ZGT2 675 aa15.11■□□□□ 0.01
HPS4-218ENST00000519774 ALDH1L2Q3SY69 923 aa15.11■□□□□ 0.01
HPS4-218ENST00000519774 BRIP1Q9BX63 1249 aa15.11■□□□□ 0.01
HPS4-218ENST00000519774 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
HPS4-218ENST00000519774 BRCA1P38398 1863 aaKnown RBP15.11■□□□□ 0.01
HPS4-218ENST00000519774 F6X3S4 739 aa15.1■□□□□ 0.01
HPS4-218ENST00000519774 GPR162Q16538 588 aa15.1■□□□□ 0.01
HPS4-218ENST00000519774 DNAAF4Q8WXU2 420 aa15.1■□□□□ 0.01
HPS4-218ENST00000519774 H0YIN7 160 aa15.09■□□□□ 0.01
HPS4-218ENST00000519774 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
HPS4-218ENST00000519774 CACNA1SQ13698 1873 aa15.09■□□□□ 0.01
HPS4-218ENST00000519774 YBX3P16989 372 aaKnown RBP eCLIP15.08■□□□□ 0
HPS4-218ENST00000519774 KCNA3P22001 575 aa15.08■□□□□ 0
HPS4-218ENST00000519774 RARSP54136 660 aaKnown RBP15.08■□□□□ 0
HPS4-218ENST00000519774 TRIM28Q13263 835 aaKnown RBP15.08■□□□□ 0
HPS4-218ENST00000519774 CWF19L2Q2TBE0 894 aaKnown RBP15.08■□□□□ 0
HPS4-218ENST00000519774 SYNE4Q8N205 404 aa15.08■□□□□ 0
HPS4-218ENST00000519774 ZNF622Q969S3 477 aaKnown RBP eCLIP15.08■□□□□ 0
HPS4-218ENST00000519774 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
HPS4-218ENST00000519774 BCS1LQ9Y276 419 aa15.08■□□□□ 0
HPS4-218ENST00000519774 RNF123Q5XPI4 1314 aa15.08■□□□□ 0
HPS4-218ENST00000519774 SH3TC1Q8TE82 1336 aa15.08■□□□□ 0
HPS4-218ENST00000519774 RIC1Q4ADV7 1423 aa15.08■□□□□ 0
HPS4-218ENST00000519774 DDX60Q8IY21 1712 aaKnown RBP15.07■□□□□ 0
HPS4-218ENST00000519774 LAMB2P55268 1798 aa15.07■□□□□ 0
HPS4-218ENST00000519774 IGKV5-2P06315 115 aa15.07■□□□□ 0
HPS4-218ENST00000519774 HCLS1P14317 486 aaPredicted RBP15.07■□□□□ 0
HPS4-218ENST00000519774 CCDC191Q8NCU4 936 aa15.07■□□□□ 0
HPS4-218ENST00000519774 FAM89AQ96GI7 184 aa15.07■□□□□ 0
HPS4-218ENST00000519774 PIM2Q9P1W9 311 aa15.07■□□□□ 0
HPS4-218ENST00000519774 NEURL1BA8MQ27 555 aa15.06■□□□□ 0
HPS4-218ENST00000519774 SLC4A10Q6U841 1118 aa15.06■□□□□ 0
HPS4-218ENST00000519774 JARID2Q92833 1246 aaPredicted RBP15.06■□□□□ 0
HPS4-218ENST00000519774 PDZRN3Q9UPQ7 1066 aa15.06■□□□□ 0
HPS4-218ENST00000519774 PTPRCP08575 1304 aa15.06■□□□□ 0
HPS4-218ENST00000519774 SRGNP10124 158 aa15.05■□□□□ -0
HPS4-218ENST00000519774 DALRD3Q5D0E6 543 aaKnown RBP15.05■□□□□ -0
HPS4-218ENST00000519774 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
HPS4-218ENST00000519774 LINS1Q8NG48 757 aa15.05■□□□□ -0
HPS4-218ENST00000519774 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ -0
HPS4-218ENST00000519774 ZNF219Q9P2Y4 722 aaPredicted RBP15.05■□□□□ -0
HPS4-218ENST00000519774 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
HPS4-218ENST00000519774 KIF16BQ96L93 1317 aa15.04■□□□□ -0
HPS4-218ENST00000519774 PCCAP05165 728 aaPredicted RBP15.04■□□□□ -0
HPS4-218ENST00000519774 NPR1P16066 1061 aa15.04■□□□□ -0
HPS4-218ENST00000519774 BEND3Q5T5X7 828 aa15.04■□□□□ -0
HPS4-218ENST00000519774 STYK1Q6J9G0 422 aa15.04■□□□□ -0
HPS4-218ENST00000519774 TTLL6Q8N841 843 aa15.04■□□□□ -0
HPS4-218ENST00000519774 ZBTB38Q8NAP3 1195 aaPredicted RBP15.04■□□□□ -0
HPS4-218ENST00000519774 MASTLQ96GX5 879 aa15.04■□□□□ -0
HPS4-218ENST00000519774 NLRP3Q96P20 1036 aa15.04■□□□□ -0
HPS4-218ENST00000519774 NOB1Q9ULX3 412 aaKnown RBP15.04■□□□□ -0
HPS4-218ENST00000519774 KLRG2A4D1S0 409 aaPredicted RBP15.03■□□□□ -0
HPS4-218ENST00000519774 IRS4O14654 1257 aaPredicted RBP15.03■□□□□ -0
HPS4-218ENST00000519774 BCAR3O75815 825 aa15.03■□□□□ -0
HPS4-218ENST00000519774 SLC10A5Q5PT55 438 aa15.03■□□□□ -0
HPS4-218ENST00000519774 UBE3BQ7Z3V4 1068 aa15.03■□□□□ -0
HPS4-218ENST00000519774 SLX4Q8IY92 1834 aa15.02■□□□□ -0
HPS4-218ENST00000519774 GCKRQ14397 625 aa15.02■□□□□ -0
HPS4-218ENST00000519774 CRY2Q49AN0 593 aa15.02■□□□□ -0
HPS4-218ENST00000519774 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
HPS4-218ENST00000519774 CNKSR1Q969H4 720 aa15.02■□□□□ -0
HPS4-218ENST00000519774 SRCIN1Q9C0H9 1055 aa15.02■□□□□ -0
HPS4-218ENST00000519774 CDHR2Q9BYE9 1310 aa15.01□□□□□ -0.01
HPS4-218ENST00000519774 GRIN3BO60391 1043 aa15.01□□□□□ -0.01
HPS4-218ENST00000519774 BRPF1P55201 1214 aaPredicted RBP15.01□□□□□ -0.01
HPS4-218ENST00000519774 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
HPS4-218ENST00000519774 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
HPS4-218ENST00000519774 MYH3P11055 1940 aa15□□□□□ -0.01
HPS4-218ENST00000519774 ALDH1L1O75891 902 aa15□□□□□ -0.01
HPS4-218ENST00000519774 HSP90B1P14625 803 aaKnown RBP15□□□□□ -0.01
HPS4-218ENST00000519774 RBM17Q96I25 401 aaKnown RBP15□□□□□ -0.01
HPS4-218ENST00000519774 H7C1W4 665 aa14.99□□□□□ -0.01
HPS4-218ENST00000519774 C21orf2O43822 256 aa14.99□□□□□ -0.01
HPS4-218ENST00000519774 PDE8AO60658 829 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms