RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 EAF2Q96CJ1 260 aaPredicted RBP10.21□□□□□ -0.77
HMGB4-203ENST00000519684 CHMP3Q9Y3E7 222 aa10.21□□□□□ -0.77
HMGB4-203ENST00000519684 RAD50Q92878 1312 aa10.21□□□□□ -0.77
HMGB4-203ENST00000519684 H7C1W4 665 aa10.21□□□□□ -0.78
HMGB4-203ENST00000519684 EXOC5O00471 708 aa10.21□□□□□ -0.78
HMGB4-203ENST00000519684 HSPA4P34932 840 aa10.21□□□□□ -0.78
HMGB4-203ENST00000519684 CASP7P55210 303 aa10.21□□□□□ -0.78
HMGB4-203ENST00000519684 NUCB2P80303 420 aa10.21□□□□□ -0.78
HMGB4-203ENST00000519684 PIGBQ92521 554 aa10.21□□□□□ -0.78
HMGB4-203ENST00000519684 ZNF330Q9Y3S2 320 aaPredicted RBP10.21□□□□□ -0.78
HMGB4-203ENST00000519684 RFX5P48382 616 aaPredicted RBP10.2□□□□□ -0.78
HMGB4-203ENST00000519684 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
HMGB4-203ENST00000519684 LMBR1LQ6UX01 489 aa10.2□□□□□ -0.78
HMGB4-203ENST00000519684 IL17RAQ96F46 866 aa10.2□□□□□ -0.78
HMGB4-203ENST00000519684 PALD1Q9ULE6 856 aa10.2□□□□□ -0.78
HMGB4-203ENST00000519684 ASAP1Q9ULH1 1129 aa10.2□□□□□ -0.78
HMGB4-203ENST00000519684 GOLGA6L22H0YM25 854 aa10.19□□□□□ -0.78
HMGB4-203ENST00000519684 TFCP2Q12800 502 aa10.19□□□□□ -0.78
HMGB4-203ENST00000519684 TNNI3KQ59H18 835 aa10.19□□□□□ -0.78
HMGB4-203ENST00000519684 DNAJC10Q8IXB1 793 aa10.19□□□□□ -0.78
HMGB4-203ENST00000519684 CDCA7Q9BWT1 371 aaPredicted RBP10.19□□□□□ -0.78
HMGB4-203ENST00000519684 LSG1Q9H089 658 aaKnown RBP10.19□□□□□ -0.78
HMGB4-203ENST00000519684 IL25Q9H293 177 aa10.19□□□□□ -0.78
HMGB4-203ENST00000519684 ATG3Q9NT62 314 aa10.19□□□□□ -0.78
HMGB4-203ENST00000519684 TLR7Q9NYK1 1049 aaKnown RBP10.19□□□□□ -0.78
HMGB4-203ENST00000519684 FPGT-TNNI3KV9GXZ4 949 aa10.19□□□□□ -0.78
HMGB4-203ENST00000519684 LTBP4Q8N2S1 1624 aa10.18□□□□□ -0.78
HMGB4-203ENST00000519684 FOXO4P98177 505 aa10.18□□□□□ -0.78
HMGB4-203ENST00000519684 FSD1Q9BTV5 496 aa10.18□□□□□ -0.78
HMGB4-203ENST00000519684 BOLA2Q9H3K6 86 aa10.18□□□□□ -0.78
HMGB4-203ENST00000519684 BCL9O00512 1426 aa10.18□□□□□ -0.78
HMGB4-203ENST00000519684 SSFA2P28290 1259 aa10.18□□□□□ -0.78
HMGB4-203ENST00000519684 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.18□□□□□ -0.78
HMGB4-203ENST00000519684 DOT1LQ8TEK3 1739 aa10.18□□□□□ -0.78
HMGB4-203ENST00000519684 NRAPQ86VF7 1730 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 TRAK2O60296 914 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 TCIRG1Q13488 830 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 SYTL4Q96C24 671 aaPredicted RBP10.17□□□□□ -0.78
HMGB4-203ENST00000519684 TMX3Q96JJ7 454 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 ARXQ96QS3 562 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 ATP5JP18859 108 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 KLHL34Q8N239 644 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 ISCA1Q9BUE6 129 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 SNX14Q9Y5W7 946 aa10.17□□□□□ -0.78
HMGB4-203ENST00000519684 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.17□□□□□ -0.78
HMGB4-203ENST00000519684 IL15P40933 162 aaPredicted RBP10.16□□□□□ -0.78
HMGB4-203ENST00000519684 KCNJ4P48050 445 aa10.16□□□□□ -0.78
HMGB4-203ENST00000519684 NMIQ13287 307 aaPredicted RBP10.16□□□□□ -0.78
HMGB4-203ENST00000519684 SKOR2Q2VWA4 1001 aaPredicted RBP10.16□□□□□ -0.78
HMGB4-203ENST00000519684 NOL8Q76FK4 1167 aaKnown RBP10.16□□□□□ -0.78
HMGB4-203ENST00000519684 UPF3BQ9BZI7 483 aaKnown RBP10.16□□□□□ -0.78
HMGB4-203ENST00000519684 DBNLQ9UJU6 430 aaKnown RBP10.16□□□□□ -0.78
HMGB4-203ENST00000519684 THRAP3Q9Y2W1 955 aaKnown RBP10.16□□□□□ -0.78
HMGB4-203ENST00000519684 MAP3K15Q6ZN16 1313 aa10.16□□□□□ -0.78
HMGB4-203ENST00000519684 TRIM28Q13263 835 aaKnown RBP10.16□□□□□ -0.78
HMGB4-203ENST00000519684 HSP90AB3PQ58FF7 597 aa10.16□□□□□ -0.78
HMGB4-203ENST00000519684 ZGPATQ8N5A5 531 aaKnown RBP10.16□□□□□ -0.78
HMGB4-203ENST00000519684 ANKRD36CQ5JPF3 1778 aa10.16□□□□□ -0.78
HMGB4-203ENST00000519684 CCDC171Q6TFL3 1326 aa10.15□□□□□ -0.78
HMGB4-203ENST00000519684 ZKSCAN1P17029 563 aaPredicted RBP10.15□□□□□ -0.78
HMGB4-203ENST00000519684 CUL4AQ13619 759 aa10.15□□□□□ -0.78
HMGB4-203ENST00000519684 GPR108Q9NPR9 543 aa10.15□□□□□ -0.78
HMGB4-203ENST00000519684 RFX7Q2KHR2 1363 aa10.15□□□□□ -0.78
HMGB4-203ENST00000519684 SPATA31A1Q5TZJ5 1347 aa10.15□□□□□ -0.78
HMGB4-203ENST00000519684 NWD2Q9ULI1 1742 aa10.15□□□□□ -0.79
HMGB4-203ENST00000519684 CIAO1O76071 339 aa10.15□□□□□ -0.79
HMGB4-203ENST00000519684 PCCAP05165 728 aaPredicted RBP10.15□□□□□ -0.79
HMGB4-203ENST00000519684 DDB1Q16531 1140 aa10.15□□□□□ -0.79
HMGB4-203ENST00000519684 CCDC57Q2TAC2 916 aa10.15□□□□□ -0.79
HMGB4-203ENST00000519684 CLEC17AQ6ZS10 378 aa10.15□□□□□ -0.79
HMGB4-203ENST00000519684 INTS4Q96HW7 963 aaKnown RBP10.15□□□□□ -0.79
HMGB4-203ENST00000519684 FAM227BQ96M60 508 aa10.15□□□□□ -0.79
HMGB4-203ENST00000519684 DBNDD2Q9BQY9 259 aa10.15□□□□□ -0.79
HMGB4-203ENST00000519684 A0A0G2JS52 829 aa10.14□□□□□ -0.79
HMGB4-203ENST00000519684 NUTM2BA6NNL0 878 aaPredicted RBP10.14□□□□□ -0.79
HMGB4-203ENST00000519684 NUTM2EB1AL46 878 aaPredicted RBP10.14□□□□□ -0.79
HMGB4-203ENST00000519684 EYA2O00167 538 aa10.14□□□□□ -0.79
HMGB4-203ENST00000519684 BAG4O95429 457 aaKnown RBP10.14□□□□□ -0.79
HMGB4-203ENST00000519684 CYP19A1P11511 503 aaPredicted RBP10.14□□□□□ -0.79
HMGB4-203ENST00000519684 PTH1RQ03431 593 aa10.14□□□□□ -0.79
HMGB4-203ENST00000519684 TAF7LQ5H9L4 462 aa10.14□□□□□ -0.79
HMGB4-203ENST00000519684 L1TD1Q5T7N2 865 aaKnown RBP10.14□□□□□ -0.79
HMGB4-203ENST00000519684 PRPF40BQ6NWY9 871 aaKnown RBP10.14□□□□□ -0.79
HMGB4-203ENST00000519684 GIGYF2Q6Y7W6 1299 aaKnown RBP10.14□□□□□ -0.79
HMGB4-203ENST00000519684 NUTM2AQ8IVF1 878 aaPredicted RBP10.14□□□□□ -0.79
HMGB4-203ENST00000519684 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
HMGB4-203ENST00000519684 DNAJC2Q99543 621 aaKnown RBP10.14□□□□□ -0.79
HMGB4-203ENST00000519684 CYP2E1P05181 493 aaPredicted RBP10.13□□□□□ -0.79
HMGB4-203ENST00000519684 CASTP20810 708 aaKnown RBP10.13□□□□□ -0.79
HMGB4-203ENST00000519684 PRIM1P49642 420 aaKnown RBP10.13□□□□□ -0.79
HMGB4-203ENST00000519684 RNF20Q5VTR2 975 aa10.13□□□□□ -0.79
HMGB4-203ENST00000519684 ATG9AQ7Z3C6 839 aa10.13□□□□□ -0.79
HMGB4-203ENST00000519684 ZBTB38Q8NAP3 1195 aaPredicted RBP10.13□□□□□ -0.79
HMGB4-203ENST00000519684 HAUS7Q99871 368 aa10.13□□□□□ -0.79
HMGB4-203ENST00000519684 GZF1Q9H116 711 aaPredicted RBP10.13□□□□□ -0.79
HMGB4-203ENST00000519684 SNRKQ9NRH2 765 aa10.13□□□□□ -0.79
HMGB4-203ENST00000519684 CCDC9Q9Y3X0 531 aaKnown RBP10.13□□□□□ -0.79
HMGB4-203ENST00000519684 RBM8AQ9Y5S9 174 aaKnown RBP10.13□□□□□ -0.79
HMGB4-203ENST00000519684 ZNF609O15014 1411 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms