RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 FSD1Q9BTV5 496 aa13.53□□□□□ -0.24
NUDCD1-203ENST00000519607 MTMR6Q9Y217 621 aa13.53□□□□□ -0.24
NUDCD1-203ENST00000519607 LARGE1O95461 756 aa13.52□□□□□ -0.24
NUDCD1-203ENST00000519607 AIMP1Q12904 312 aaKnown RBP13.52□□□□□ -0.24
NUDCD1-203ENST00000519607 NMIQ13287 307 aaPredicted RBP13.52□□□□□ -0.24
NUDCD1-203ENST00000519607 LARP1BQ659C4 914 aaKnown RBP13.52□□□□□ -0.24
NUDCD1-203ENST00000519607 BLOC1S2Q6QNY1 142 aa13.52□□□□□ -0.24
NUDCD1-203ENST00000519607 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.24
NUDCD1-203ENST00000519607 SASH1O94885 1247 aa13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 KRT85P78386 507 aa13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 DNM1Q05193 864 aaKnown RBP13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 ME3Q16798 604 aa13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 EAF2Q96CJ1 260 aaPredicted RBP13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 MAP7D2Q96T17 732 aa13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 SNRKQ9NRH2 765 aa13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 HMG20BQ9P0W2 317 aa13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 PXDNQ92626 1479 aa13.52□□□□□ -0.25
NUDCD1-203ENST00000519607 HCLS1P14317 486 aaPredicted RBP13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 SASS6Q6UVJ0 657 aa13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 USP25Q9UHP3 1055 aa13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 SLIT3O75094 1523 aa13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 SLC27A2O14975 620 aa13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 ADCY5O95622 1261 aa13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 ALDH8A1Q9H2A2 487 aaPredicted RBP13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
NUDCD1-203ENST00000519607 UQCRHLA0A096LP55 91 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 KDM4AO75164 1064 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 UQCRHP07919 91 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 DNTTIP2Q5QJE6 756 aaKnown RBP13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 FAM227BQ96M60 508 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 BOLA2Q9H3K6 86 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 TPM3P06753 285 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 CCDC192P0DO97 292 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 KRT32Q14532 448 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 SIL1Q9H173 461 aa13.5□□□□□ -0.25
NUDCD1-203ENST00000519607 PRAMEF22A3QJZ6 481 aa13.49□□□□□ -0.25
NUDCD1-203ENST00000519607 GOLGA6L4A6NEF3 574 aa13.49□□□□□ -0.25
NUDCD1-203ENST00000519607 DYNC1I1O14576 645 aa13.49□□□□□ -0.25
NUDCD1-203ENST00000519607 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
NUDCD1-203ENST00000519607 MTERF4Q7Z6M4 381 aaKnown RBP13.49□□□□□ -0.25
NUDCD1-203ENST00000519607 NECAB1Q8N987 351 aa13.49□□□□□ -0.25
NUDCD1-203ENST00000519607 KAZALD1Q96I82 304 aa13.49□□□□□ -0.25
NUDCD1-203ENST00000519607 TPCN1Q9ULQ1 816 aa13.49□□□□□ -0.25
NUDCD1-203ENST00000519607 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
NUDCD1-203ENST00000519607 GIMAP6Q6P9H5 292 aa13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 SCAND2PQ9GZW5 306 aaPredicted RBP13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 ELP1O95163 1332 aa13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 GOLGA6L6A8MZA4 724 aa13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 RPS6KB1P23443 525 aa13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 GCKRQ14397 625 aa13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 TSGA10IPQ3SY00 556 aa13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 PIBF1Q8WXW3 757 aa13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 ADAMTS7Q9UKP4 1686 aa13.48□□□□□ -0.25
NUDCD1-203ENST00000519607 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
NUDCD1-203ENST00000519607 IGKV5-2P06315 115 aa13.47□□□□□ -0.25
NUDCD1-203ENST00000519607 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
NUDCD1-203ENST00000519607 PDIA6Q15084 440 aa13.47□□□□□ -0.25
NUDCD1-203ENST00000519607 ORAI2Q96SN7 254 aa13.47□□□□□ -0.25
NUDCD1-203ENST00000519607 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
NUDCD1-203ENST00000519607 MYL6BP14649 208 aa13.47□□□□□ -0.25
NUDCD1-203ENST00000519607 DDX54Q8TDD1 881 aaKnown RBP13.47□□□□□ -0.25
NUDCD1-203ENST00000519607 FUCA2Q9BTY2 467 aa13.47□□□□□ -0.25
NUDCD1-203ENST00000519607 MED23Q9ULK4 1368 aa13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 ADAMTSL3P82987 1691 aa13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 SCN11AQ9UI33 1791 aa13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 HMGN5P82970 282 aaKnown RBP13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 MYD88Q99836 296 aa13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 NUP62CLQ9H1M0 184 aa13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 COPRSQ9NQ92 184 aa13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.25
NUDCD1-203ENST00000519607 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 ATP5JP18859 108 aa13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 ST3GAL1Q11201 340 aa13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 NOLC1Q14978 699 aaKnown RBP eCLIP13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 MAP3K11Q16584 847 aa13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 COPS6Q7L5N1 327 aa13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 TTC5Q8N0Z6 440 aa13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 FAM13BQ9NYF5 915 aa13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 TLR7Q9NYK1 1049 aaKnown RBP13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.26
NUDCD1-203ENST00000519607 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
NUDCD1-203ENST00000519607 PRIMPOLQ96LW4 560 aa13.45□□□□□ -0.26
NUDCD1-203ENST00000519607 ERBB3P21860 1342 aa13.45□□□□□ -0.26
NUDCD1-203ENST00000519607 CDC37L1Q7L3B6 337 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 SPATA32Q96LK8 384 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■■■□ 21
NUDCD1-203ENST00000519607 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 RFX7Q2KHR2 1363 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 NPHP4O75161 1426 aaPredicted RBP13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 MRC1P22897 1456 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms