RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
CTNNA1-215ENST00000519309 NIP7Q9Y221 180 aaKnown RBP eCLIP11.34□□□□□ -0.59
CTNNA1-215ENST00000519309 CDHR2Q9BYE9 1310 aa11.34□□□□□ -0.59
CTNNA1-215ENST00000519309 LAMB2P55268 1798 aa11.33□□□□□ -0.59
CTNNA1-215ENST00000519309 NPC1L1Q9UHC9 1359 aa11.33□□□□□ -0.6
CTNNA1-215ENST00000519309 LRRC37AA6NMS7 1700 aa11.33□□□□□ -0.6
CTNNA1-215ENST00000519309 KCNQ3O43525 872 aa11.33□□□□□ -0.6
CTNNA1-215ENST00000519309 EPS15P42566 896 aa11.33□□□□□ -0.6
CTNNA1-215ENST00000519309 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-215ENST00000519309 SAPCD2Q86UD0 394 aa11.33□□□□□ -0.6
CTNNA1-215ENST00000519309 USP16Q9Y5T5 823 aa11.33□□□□□ -0.6
CTNNA1-215ENST00000519309 ANKRD36CQ5JPF3 1778 aa11.32□□□□□ -0.6
CTNNA1-215ENST00000519309 BTBD11A6QL63 1104 aa11.32□□□□□ -0.6
CTNNA1-215ENST00000519309 TRAF5O00463 557 aa11.32□□□□□ -0.6
CTNNA1-215ENST00000519309 HOXA10P31260 410 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-215ENST00000519309 PIP4K2AP48426 406 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-215ENST00000519309 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
CTNNA1-215ENST00000519309 DDX60Q8IY21 1712 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-215ENST00000519309 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
CTNNA1-215ENST00000519309 NBPF26B4DH59 902 aa11.31□□□□□ -0.6
CTNNA1-215ENST00000519309 AOC2O75106 756 aa11.31□□□□□ -0.6
CTNNA1-215ENST00000519309 SNRPA1P09661 255 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-215ENST00000519309 NBPF10Q6P3W6 841 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-215ENST00000519309 NBPF15Q8N660 670 aa11.31□□□□□ -0.6
CTNNA1-215ENST00000519309 PCGF6Q9BYE7 350 aa11.31□□□□□ -0.6
CTNNA1-215ENST00000519309 GPRC5DQ9NZD1 345 aa11.31□□□□□ -0.6
CTNNA1-215ENST00000519309 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
CTNNA1-215ENST00000519309 DUOX1Q9NRD9 1551 aa11.3□□□□□ -0.6
CTNNA1-215ENST00000519309 GRM1Q13255 1194 aa11.3□□□□□ -0.6
CTNNA1-215ENST00000519309 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
CTNNA1-215ENST00000519309 NYXQ9GZU5 481 aa11.3□□□□□ -0.6
CTNNA1-215ENST00000519309 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-215ENST00000519309 PGAP2Q9UHJ9 254 aa11.3□□□□□ -0.6
CTNNA1-215ENST00000519309 DLG5Q8TDM6 1919 aa11.3□□□□□ -0.6
CTNNA1-215ENST00000519309 AKAP11Q9UKA4 1901 aa11.3□□□□□ -0.6
CTNNA1-215ENST00000519309 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-215ENST00000519309 CELF2O95319 508 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-215ENST00000519309 DGKZQ13574 1117 aa11.29□□□□□ -0.6
CTNNA1-215ENST00000519309 HLFQ16534 295 aa11.29□□□□□ -0.6
CTNNA1-215ENST00000519309 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
CTNNA1-215ENST00000519309 VPS33BQ9H267 617 aa11.29□□□□□ -0.6
CTNNA1-215ENST00000519309 ERVV-1B6SEH8 477 aa11.28□□□□□ -0.6
CTNNA1-215ENST00000519309 PPEF1O14829 653 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-215ENST00000519309 NOGQ13253 232 aa11.28□□□□□ -0.6
CTNNA1-215ENST00000519309 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-215ENST00000519309 CRAMP1Q96RY5 1269 aa11.28□□□□□ -0.6
CTNNA1-215ENST00000519309 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
CTNNA1-215ENST00000519309 UBN2Q6ZU65 1347 aa11.28□□□□□ -0.6
CTNNA1-215ENST00000519309 U2SURPO15042 1029 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-215ENST00000519309 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-215ENST00000519309 CIAPIN1Q6FI81 312 aa11.27□□□□□ -0.61
CTNNA1-215ENST00000519309 SLC51AQ86UW1 340 aa11.27□□□□□ -0.61
CTNNA1-215ENST00000519309 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-215ENST00000519309 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.61
CTNNA1-215ENST00000519309 SAGE1Q9NXZ1 904 aa11.27□□□□□ -0.61
CTNNA1-215ENST00000519309 FAM177BA6PVY3 158 aa11.26□□□□□ -0.61
CTNNA1-215ENST00000519309 PPIP5K2O43314 1243 aa11.26□□□□□ -0.61
CTNNA1-215ENST00000519309 PRKAR2BP31323 418 aa11.26□□□□□ -0.61
CTNNA1-215ENST00000519309 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
CTNNA1-215ENST00000519309 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
CTNNA1-215ENST00000519309 RTFDC1Q9BY42 306 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-215ENST00000519309 GLIS2Q9BZE0 524 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-215ENST00000519309 MAP3K15Q6ZN16 1313 aa11.26□□□□□ -0.61
CTNNA1-215ENST00000519309 NTSR2O95665 410 aa11.25□□□□□ -0.61
CTNNA1-215ENST00000519309 CXCL9Q07325 125 aa11.25□□□□□ -0.61
CTNNA1-215ENST00000519309 AOC3Q16853 763 aa11.25□□□□□ -0.61
CTNNA1-215ENST00000519309 PRPF38BQ5VTL8 546 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-215ENST00000519309 RBM17Q96I25 401 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-215ENST00000519309 ZNRF3Q9ULT6 936 aa11.25□□□□□ -0.61
CTNNA1-215ENST00000519309 PSME4Q14997 1843 aa11.24□□□□□ -0.61
CTNNA1-215ENST00000519309 GMPSP49915 693 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-215ENST00000519309 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-215ENST00000519309 SUPT20HQ8NEM7 779 aa11.24□□□□□ -0.61
CTNNA1-215ENST00000519309 ZIC5Q96T25 663 aa11.24□□□□□ -0.61
CTNNA1-215ENST00000519309 ATP6V0A2Q9Y487 856 aa11.24□□□□□ -0.61
CTNNA1-215ENST00000519309 POLR2AP24928 1970 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-215ENST00000519309 FAM155AB1AL88 458 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-215ENST00000519309 HTATSF1O43719 755 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-215ENST00000519309 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-215ENST00000519309 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
CTNNA1-215ENST00000519309 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
CTNNA1-215ENST00000519309 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
CTNNA1-215ENST00000519309 MCM10Q7L590 875 aa11.23□□□□□ -0.61
CTNNA1-215ENST00000519309 TRPM4Q8TD43 1214 aa11.23□□□□□ -0.61
CTNNA1-215ENST00000519309 ABCC4O15439 1325 aa11.22□□□□□ -0.61
CTNNA1-215ENST00000519309 TAF1P21675 1872 aa11.22□□□□□ -0.61
CTNNA1-215ENST00000519309 HUNKP57058 714 aa11.22□□□□□ -0.61
CTNNA1-215ENST00000519309 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
CTNNA1-215ENST00000519309 ZNF34Q8IZ26 560 aa11.22□□□□□ -0.61
CTNNA1-215ENST00000519309 RTF1Q92541 710 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-215ENST00000519309 PAPPA2Q9BXP8 1791 aa11.22□□□□□ -0.61
CTNNA1-215ENST00000519309 GPTP24298 496 aa11.21□□□□□ -0.61
CTNNA1-215ENST00000519309 SOX10P56693 466 aa11.21□□□□□ -0.61
CTNNA1-215ENST00000519309 PARP10Q53GL7 1025 aa11.21□□□□□ -0.61
CTNNA1-215ENST00000519309 SUSD4Q5VX71 490 aa11.21□□□□□ -0.61
CTNNA1-215ENST00000519309 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
CTNNA1-215ENST00000519309 KIF6Q6ZMV9 814 aa11.21□□□□□ -0.61
CTNNA1-215ENST00000519309 TTLL7Q6ZT98 887 aa11.21□□□□□ -0.61
CTNNA1-215ENST00000519309 ZNF408Q9H9D4 720 aa11.21□□□□□ -0.61
CTNNA1-215ENST00000519309 RBBP6Q7Z6E9 1792 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms