RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 KIF3CO14782 793 aa16.49■□□□□ 0.23
MCPH1-202ENST00000519221 TCIRG1Q13488 830 aa16.49■□□□□ 0.23
MCPH1-202ENST00000519221 ERFEQ4G0M1 354 aa16.49■□□□□ 0.23
MCPH1-202ENST00000519221 PLBD2Q8NHP8 589 aa16.49■□□□□ 0.23
MCPH1-202ENST00000519221 TAOK3Q9H2K8 898 aa16.49■□□□□ 0.23
MCPH1-202ENST00000519221 IL16Q14005 1332 aa16.48■□□□□ 0.23
MCPH1-202ENST00000519221 HOXA10P31260 410 aaPredicted RBP16.48■□□□□ 0.23
MCPH1-202ENST00000519221 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
MCPH1-202ENST00000519221 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
MCPH1-202ENST00000519221 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
MCPH1-202ENST00000519221 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
MCPH1-202ENST00000519221 PRELPP51888 382 aa16.47■□□□□ 0.23
MCPH1-202ENST00000519221 SLC10A5Q5PT55 438 aa16.47■□□□□ 0.23
MCPH1-202ENST00000519221 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
MCPH1-202ENST00000519221 RPGRQ92834 1020 aaKnown RBP16.47■□□□□ 0.23
MCPH1-202ENST00000519221 LAMB2P55268 1798 aa16.46■□□□□ 0.23
MCPH1-202ENST00000519221 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
MCPH1-202ENST00000519221 NLRP10Q86W26 655 aa16.46■□□□□ 0.23
MCPH1-202ENST00000519221 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
MCPH1-202ENST00000519221 NLRP3Q96P20 1036 aa16.46■□□□□ 0.23
MCPH1-202ENST00000519221 CRAMP1Q96RY5 1269 aa16.46■□□□□ 0.23
MCPH1-202ENST00000519221 GRIPAP1Q4V328 841 aa16.45■□□□□ 0.22
MCPH1-202ENST00000519221 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
MCPH1-202ENST00000519221 C8orf58Q8NAV2 365 aa16.45■□□□□ 0.22
MCPH1-202ENST00000519221 NMRK2Q9NPI5 230 aa16.45■□□□□ 0.22
MCPH1-202ENST00000519221 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
MCPH1-202ENST00000519221 GLTPD2A6NH11 291 aa16.44■□□□□ 0.22
MCPH1-202ENST00000519221 ELL2O00472 640 aaPredicted RBP16.44■□□□□ 0.22
MCPH1-202ENST00000519221 TOMM70O94826 608 aa16.44■□□□□ 0.22
MCPH1-202ENST00000519221 RBM17Q96I25 401 aaKnown RBP16.44■□□□□ 0.22
MCPH1-202ENST00000519221 SH3TC1Q8TE82 1336 aa16.44■□□□□ 0.22
MCPH1-202ENST00000519221 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
MCPH1-202ENST00000519221 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
MCPH1-202ENST00000519221 TRIM28Q13263 835 aaKnown RBP16.43■□□□□ 0.22
MCPH1-202ENST00000519221 DPY19L2Q6NUT2 758 aa16.43■□□□□ 0.22
MCPH1-202ENST00000519221 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
MCPH1-202ENST00000519221 ISCA1Q9BUE6 129 aa16.43■□□□□ 0.22
MCPH1-202ENST00000519221 TRMT112Q9UI30 125 aaKnown RBP16.43■□□□□ 0.22
MCPH1-202ENST00000519221 DDX60Q8IY21 1712 aaKnown RBP16.42■□□□□ 0.22
MCPH1-202ENST00000519221 WDR90Q96KV7 1748 aa16.42■□□□□ 0.22
MCPH1-202ENST00000519221 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
MCPH1-202ENST00000519221 RBM46Q8TBY0 533 aaKnown RBP16.41■□□□□ 0.22
MCPH1-202ENST00000519221 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
MCPH1-202ENST00000519221 PSMD1Q99460 953 aa16.41■□□□□ 0.22
MCPH1-202ENST00000519221 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
MCPH1-202ENST00000519221 DDX58O95786 925 aaKnown RBP16.4■□□□□ 0.22
MCPH1-202ENST00000519221 C3orf67Q6ZVT6 689 aa16.4■□□□□ 0.22
MCPH1-202ENST00000519221 RIC3Q7Z5B4 369 aa16.4■□□□□ 0.22
MCPH1-202ENST00000519221 TSPYL6Q8N831 410 aa16.4■□□□□ 0.22
MCPH1-202ENST00000519221 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
MCPH1-202ENST00000519221 RRAGCQ9HB90 399 aa16.4■□□□□ 0.22
MCPH1-202ENST00000519221 PPEF1O14829 653 aaPredicted RBP16.39■□□□□ 0.21
MCPH1-202ENST00000519221 VEGFAP15692 232 aaPredicted RBP16.39■□□□□ 0.21
MCPH1-202ENST00000519221 HSPA6P17066 643 aa16.39■□□□□ 0.21
MCPH1-202ENST00000519221 TWISTNBQ3B726 338 aaPredicted RBP16.39■□□□□ 0.21
MCPH1-202ENST00000519221 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
MCPH1-202ENST00000519221 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
MCPH1-202ENST00000519221 TMX4Q9H1E5 349 aaPredicted RBP16.39■□□□□ 0.21
MCPH1-202ENST00000519221 SCN4AP35499 1836 aa16.38■□□□□ 0.21
MCPH1-202ENST00000519221 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
MCPH1-202ENST00000519221 HCLS1P14317 486 aaPredicted RBP16.38■□□□□ 0.21
MCPH1-202ENST00000519221 OLFM4Q6UX06 510 aa16.38■□□□□ 0.21
MCPH1-202ENST00000519221 TAF1P21675 1872 aa16.37■□□□□ 0.21
MCPH1-202ENST00000519221 BBOX1O75936 387 aa16.37■□□□□ 0.21
MCPH1-202ENST00000519221 HSP90B1P14625 803 aaKnown RBP16.37■□□□□ 0.21
MCPH1-202ENST00000519221 IARSP41252 1262 aaKnown RBP16.37■□□□□ 0.21
MCPH1-202ENST00000519221 FSTL1Q12841 308 aa16.37■□□□□ 0.21
MCPH1-202ENST00000519221 DDX46Q7L014 1031 aaKnown RBP16.37■□□□□ 0.21
MCPH1-202ENST00000519221 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
MCPH1-202ENST00000519221 CCDC191Q8NCU4 936 aa16.37■□□□□ 0.21
MCPH1-202ENST00000519221 ZNF277Q9NRM2 450 aaPredicted RBP16.37■□□□□ 0.21
MCPH1-202ENST00000519221 ABCC4O15439 1325 aa16.37■□□□□ 0.21
MCPH1-202ENST00000519221 FANCIQ9NVI1 1328 aa16.37■□□□□ 0.21
MCPH1-202ENST00000519221 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
MCPH1-202ENST00000519221 METTL22Q9BUU2 404 aaPredicted RBP16.36■□□□□ 0.21
MCPH1-202ENST00000519221 ATP6V0A2Q9Y487 856 aa16.36■□□□□ 0.21
MCPH1-202ENST00000519221 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
MCPH1-202ENST00000519221 KSR2Q6VAB6 950 aa16.35■□□□□ 0.21
MCPH1-202ENST00000519221 ZBTB38Q8NAP3 1195 aaPredicted RBP16.35■□□□□ 0.21
MCPH1-202ENST00000519221 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
MCPH1-202ENST00000519221 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
MCPH1-202ENST00000519221 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
MCPH1-202ENST00000519221 SALL2Q9Y467 1007 aaPredicted RBP16.35■□□□□ 0.21
MCPH1-202ENST00000519221 MYH3P11055 1940 aa16.35■□□□□ 0.21
MCPH1-202ENST00000519221 LRRC37AA6NMS7 1700 aa16.34■□□□□ 0.21
MCPH1-202ENST00000519221 GRAPQ13588 217 aa16.34■□□□□ 0.21
MCPH1-202ENST00000519221 SP8Q8IXZ3 490 aa16.34■□□□□ 0.21
MCPH1-202ENST00000519221 SMC1BQ8NDV3 1235 aa16.34■□□□□ 0.21
MCPH1-202ENST00000519221 GRAPLQ8TC17 118 aaPredicted RBP16.34■□□□□ 0.21
MCPH1-202ENST00000519221 JDP2Q8WYK2 163 aa16.34■□□□□ 0.21
MCPH1-202ENST00000519221 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
MCPH1-202ENST00000519221 MYD88Q99836 296 aa16.34■□□□□ 0.21
MCPH1-202ENST00000519221 CEP350Q5VT06 3117 aa16.34■□□□□ 0.21
MCPH1-202ENST00000519221 POTECB2RU33 542 aa16.33■□□□□ 0.2
MCPH1-202ENST00000519221 FZD9O00144 591 aa16.33■□□□□ 0.2
MCPH1-202ENST00000519221 IRS4O14654 1257 aaPredicted RBP16.33■□□□□ 0.2
MCPH1-202ENST00000519221 DDNO94850 711 aaPredicted RBP16.33■□□□□ 0.2
MCPH1-202ENST00000519221 PCCAP05165 728 aaPredicted RBP16.33■□□□□ 0.2
MCPH1-202ENST00000519221 SUPT20HQ8NEM7 779 aa16.33■□□□□ 0.2
MCPH1-202ENST00000519221 CWC25Q9NXE8 425 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms