RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 RGL2O15211 777 aa9.71□□□□□ -0.86
SDCBP-206ENST00000519115 NEFLP07196 543 aa9.71□□□□□ -0.86
SDCBP-206ENST00000519115 TGFB2P61812 414 aa9.71□□□□□ -0.86
SDCBP-206ENST00000519115 CCDC30Q5VVM6 783 aa9.71□□□□□ -0.86
SDCBP-206ENST00000519115 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.71□□□□□ -0.86
SDCBP-206ENST00000519115 CDCA7LQ96GN5 454 aa9.71□□□□□ -0.86
SDCBP-206ENST00000519115 PHAXQ9H814 394 aaKnown RBP9.71□□□□□ -0.86
SDCBP-206ENST00000519115 HYPKQ9NX55 129 aa9.71□□□□□ -0.86
SDCBP-206ENST00000519115 ABCC12Q96J65 1359 aa9.71□□□□□ -0.86
SDCBP-206ENST00000519115 SLX4Q8IY92 1834 aa9.7□□□□□ -0.86
SDCBP-206ENST00000519115 KCNA3P22001 575 aa9.7□□□□□ -0.86
SDCBP-206ENST00000519115 ST5P78524 1137 aa9.7□□□□□ -0.86
SDCBP-206ENST00000519115 AAMPQ13685 434 aa9.7□□□□□ -0.86
SDCBP-206ENST00000519115 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
SDCBP-206ENST00000519115 C2CD5Q86YS7 1000 aa9.7□□□□□ -0.86
SDCBP-206ENST00000519115 STK31Q9BXU1 1019 aa9.7□□□□□ -0.86
SDCBP-206ENST00000519115 BCS1LQ9Y276 419 aa9.7□□□□□ -0.86
SDCBP-206ENST00000519115 CCDC88AQ3V6T2 1871 aa9.7□□□□□ -0.86
SDCBP-206ENST00000519115 MS4A1P11836 297 aa9.69□□□□□ -0.86
SDCBP-206ENST00000519115 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-206ENST00000519115 ALDH1L2Q3SY69 923 aa9.69□□□□□ -0.86
SDCBP-206ENST00000519115 SUSD4Q5VX71 490 aa9.69□□□□□ -0.86
SDCBP-206ENST00000519115 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
SDCBP-206ENST00000519115 DDX60Q8IY21 1712 aaKnown RBP9.69□□□□□ -0.86
SDCBP-206ENST00000519115 ZNF34Q8IZ26 560 aa9.69□□□□□ -0.86
SDCBP-206ENST00000519115 PLBD2Q8NHP8 589 aa9.69□□□□□ -0.86
SDCBP-206ENST00000519115 TAF1P21675 1872 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 IBTKQ9P2D0 1353 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-206ENST00000519115 ATP5J2-PTCD1G3V325 749 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 H0YIN7 160 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 VAMP4O75379 141 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 PDE6BP35913 854 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 TCIRG1Q13488 830 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 ERFEQ4G0M1 354 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 TPTE2Q6XPS3 522 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 G2E3Q7L622 706 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 RIC3Q7Z5B4 369 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 BRIP1Q9BX63 1249 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 PIM2Q9P1W9 311 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 SUPT16HQ9Y5B9 1047 aaKnown RBP9.68□□□□□ -0.86
SDCBP-206ENST00000519115 SBF1O95248 1867 aa9.68□□□□□ -0.86
SDCBP-206ENST00000519115 MYH3P11055 1940 aa9.67□□□□□ -0.86
SDCBP-206ENST00000519115 NTSR2O95665 410 aa9.67□□□□□ -0.86
SDCBP-206ENST00000519115 PARP10Q53GL7 1025 aa9.67□□□□□ -0.86
SDCBP-206ENST00000519115 HSP90AB3PQ58FF7 597 aa9.67□□□□□ -0.86
SDCBP-206ENST00000519115 DALRD3Q5D0E6 543 aaKnown RBP9.67□□□□□ -0.86
SDCBP-206ENST00000519115 NLRP10Q86W26 655 aa9.67□□□□□ -0.86
SDCBP-206ENST00000519115 ZNF622Q969S3 477 aaKnown RBP eCLIP9.67□□□□□ -0.86
SDCBP-206ENST00000519115 NYXQ9GZU5 481 aa9.67□□□□□ -0.86
SDCBP-206ENST00000519115 ADCY9O60503 1353 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 UTRNP46939 3433 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 GRIN3BO60391 1043 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 DDX58O95786 925 aaKnown RBP9.66□□□□□ -0.86
SDCBP-206ENST00000519115 PDE3AQ14432 1141 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 PPP1R42Q7Z4L9 355 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 SYNE4Q8N205 404 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 ARHGAP45Q92619 1136 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 MYD88Q99836 296 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 UTP14AQ9BVJ6 771 aaKnown RBP9.66□□□□□ -0.86
SDCBP-206ENST00000519115 MAP3K2Q9Y2U5 619 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 GTF3C3Q9Y5Q9 886 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 FER1L6Q2WGJ9 1857 aa9.66□□□□□ -0.86
SDCBP-206ENST00000519115 PI4KAP2A4QPH2 592 aa9.65□□□□□ -0.86
SDCBP-206ENST00000519115 SRGNP10124 158 aa9.65□□□□□ -0.86
SDCBP-206ENST00000519115 YY1P25490 414 aa9.65□□□□□ -0.86
SDCBP-206ENST00000519115 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.86
SDCBP-206ENST00000519115 FLIIQ13045 1269 aa9.65□□□□□ -0.86
SDCBP-206ENST00000519115 RTL5Q5HYW3 569 aaPredicted RBP9.65□□□□□ -0.86
SDCBP-206ENST00000519115 C3orf67Q6ZVT6 689 aa9.65□□□□□ -0.86
SDCBP-206ENST00000519115 TTLL6Q8N841 843 aa9.65□□□□□ -0.86
SDCBP-206ENST00000519115 PI4KAP1Q8N8J0 262 aa9.65□□□□□ -0.86
SDCBP-206ENST00000519115 ISCA1Q9BUE6 129 aa9.65□□□□□ -0.86
SDCBP-206ENST00000519115 TRMT112Q9UI30 125 aaKnown RBP9.65□□□□□ -0.86
SDCBP-206ENST00000519115 RIC1Q4ADV7 1423 aa9.65□□□□□ -0.87
SDCBP-206ENST00000519115 SPEF2Q9C093 1822 aa9.64□□□□□ -0.87
SDCBP-206ENST00000519115 IPO8O15397 1037 aaKnown RBP9.64□□□□□ -0.87
SDCBP-206ENST00000519115 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-206ENST00000519115 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
SDCBP-206ENST00000519115 FKBP5Q13451 457 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-206ENST00000519115 STYK1Q6J9G0 422 aa9.64□□□□□ -0.87
SDCBP-206ENST00000519115 PRPF40BQ6NWY9 871 aaKnown RBP9.64□□□□□ -0.87
SDCBP-206ENST00000519115 KSR2Q6VAB6 950 aa9.64□□□□□ -0.87
SDCBP-206ENST00000519115 ARHGAP27Q6ZUM4 889 aa9.64□□□□□ -0.87
SDCBP-206ENST00000519115 MASTLQ96GX5 879 aa9.64□□□□□ -0.87
SDCBP-206ENST00000519115 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-206ENST00000519115 BCL2L13Q9BXK5 485 aa9.64□□□□□ -0.87
SDCBP-206ENST00000519115 PDZRN3Q9UPQ7 1066 aa9.64□□□□□ -0.87
SDCBP-206ENST00000519115 TIAM2Q8IVF5 1701 aa9.64□□□□□ -0.87
SDCBP-206ENST00000519115 SH3TC1Q8TE82 1336 aa9.63□□□□□ -0.87
SDCBP-206ENST00000519115 DICER1Q9UPY3 1922 aaKnown RBP9.63□□□□□ -0.87
SDCBP-206ENST00000519115 KLRG2A4D1S0 409 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-206ENST00000519115 F6X3S4 739 aa9.63□□□□□ -0.87
SDCBP-206ENST00000519115 NPR1P16066 1061 aa9.63□□□□□ -0.87
SDCBP-206ENST00000519115 RASSF7Q02833 373 aa9.63□□□□□ -0.87
SDCBP-206ENST00000519115 JARID2Q92833 1246 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-206ENST00000519115 RPGRQ92834 1020 aaKnown RBP9.63□□□□□ -0.87
SDCBP-206ENST00000519115 FAM89AQ96GI7 184 aa9.63□□□□□ -0.87
SDCBP-206ENST00000519115 COL4A1P02462 1669 aa9.62□□□□□ -0.87
SDCBP-206ENST00000519115 C21orf2O43822 256 aa9.62□□□□□ -0.87
SDCBP-206ENST00000519115 IGKV5-2P06315 115 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms