RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 CAMTA2O94983 1202 aa11.89□□□□□ -0.51
LAMA4-211ENST00000518842 SNRPA1P09661 255 aaKnown RBP11.89□□□□□ -0.51
LAMA4-211ENST00000518842 TAF7Q15545 349 aaPredicted RBP11.89□□□□□ -0.51
LAMA4-211ENST00000518842 USP16Q9Y5T5 823 aa11.89□□□□□ -0.51
LAMA4-211ENST00000518842 NRXN2Q9P2S2 1712 aa11.89□□□□□ -0.51
LAMA4-211ENST00000518842 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
LAMA4-211ENST00000518842 STK25O00506 426 aa11.88□□□□□ -0.51
LAMA4-211ENST00000518842 SERPINB2P05120 415 aa11.87□□□□□ -0.51
LAMA4-211ENST00000518842 BCS1LQ9Y276 419 aa11.87□□□□□ -0.51
LAMA4-211ENST00000518842 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
LAMA4-211ENST00000518842 SCN7AQ01118 1682 aa11.87□□□□□ -0.51
LAMA4-211ENST00000518842 NBPF26B4DH59 902 aa11.86□□□□□ -0.51
LAMA4-211ENST00000518842 RGL2O15211 777 aa11.86□□□□□ -0.51
LAMA4-211ENST00000518842 CHRNA5P30532 468 aa11.86□□□□□ -0.51
LAMA4-211ENST00000518842 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
LAMA4-211ENST00000518842 NBPF10Q6P3W6 841 aaKnown RBP11.86□□□□□ -0.51
LAMA4-211ENST00000518842 NBPF15Q8N660 670 aa11.86□□□□□ -0.51
LAMA4-211ENST00000518842 PNISRQ8TF01 805 aaKnown RBP11.86□□□□□ -0.51
LAMA4-211ENST00000518842 THUMPD2Q9BTF0 503 aaKnown RBP11.86□□□□□ -0.51
LAMA4-211ENST00000518842 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
LAMA4-211ENST00000518842 MIS18AQ9NYP9 233 aa11.86□□□□□ -0.51
LAMA4-211ENST00000518842 PIM2Q9P1W9 311 aa11.86□□□□□ -0.51
LAMA4-211ENST00000518842 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
LAMA4-211ENST00000518842 N4BP2Q86UW6 1770 aaPredicted RBP11.85□□□□□ -0.51
LAMA4-211ENST00000518842 NEFMP07197 916 aa11.85□□□□□ -0.51
LAMA4-211ENST00000518842 NUDT7P0C024 238 aa11.85□□□□□ -0.51
LAMA4-211ENST00000518842 EIF4A1P60842 406 aaKnown RBP11.85□□□□□ -0.51
LAMA4-211ENST00000518842 DALRD3Q5D0E6 543 aaKnown RBP11.85□□□□□ -0.51
LAMA4-211ENST00000518842 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
LAMA4-211ENST00000518842 MAPK8IP3Q9UPT6 1336 aa11.85□□□□□ -0.51
LAMA4-211ENST00000518842 GIGYF1O75420 1035 aaPredicted RBP11.84□□□□□ -0.51
LAMA4-211ENST00000518842 PIP4K2AP48426 406 aaPredicted RBP11.84□□□□□ -0.51
LAMA4-211ENST00000518842 C1QTNF8P60827 252 aa11.84□□□□□ -0.51
LAMA4-211ENST00000518842 DZIP3Q86Y13 1208 aaKnown RBP11.84□□□□□ -0.51
LAMA4-211ENST00000518842 TMC2Q8TDI7 906 aa11.84□□□□□ -0.51
LAMA4-211ENST00000518842 PRKRIP1Q9H875 184 aaPredicted RBP11.84□□□□□ -0.51
LAMA4-211ENST00000518842 PCDHGA4Q9Y5G9 962 aa11.84□□□□□ -0.51
LAMA4-211ENST00000518842 TMPOP42166 694 aaKnown RBP11.83□□□□□ -0.52
LAMA4-211ENST00000518842 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
LAMA4-211ENST00000518842 CLEC4GQ6UXB4 293 aa11.83□□□□□ -0.52
LAMA4-211ENST00000518842 BICDL1Q6ZP65 573 aa11.83□□□□□ -0.52
LAMA4-211ENST00000518842 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
LAMA4-211ENST00000518842 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
LAMA4-211ENST00000518842 BRIP1Q9BX63 1249 aa11.82□□□□□ -0.52
LAMA4-211ENST00000518842 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
LAMA4-211ENST00000518842 LHX6Q9UPM6 363 aa11.82□□□□□ -0.52
LAMA4-211ENST00000518842 AFDNP55196 1824 aaKnown RBP11.81□□□□□ -0.52
LAMA4-211ENST00000518842 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
LAMA4-211ENST00000518842 RIPK4P57078 832 aa11.81□□□□□ -0.52
LAMA4-211ENST00000518842 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
LAMA4-211ENST00000518842 PDZRN3Q9UPQ7 1066 aa11.81□□□□□ -0.52
LAMA4-211ENST00000518842 BCORQ6W2J9 1755 aa11.81□□□□□ -0.52
LAMA4-211ENST00000518842 LRP10Q7Z4F1 713 aa11.8□□□□□ -0.52
LAMA4-211ENST00000518842 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
LAMA4-211ENST00000518842 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
LAMA4-211ENST00000518842 GPBP1L1Q9HC44 474 aaPredicted RBP11.8□□□□□ -0.52
LAMA4-211ENST00000518842 ARFGEF1Q9Y6D6 1849 aa11.8□□□□□ -0.52
LAMA4-211ENST00000518842 ERBB4Q15303 1308 aa11.8□□□□□ -0.52
LAMA4-211ENST00000518842 KLRG2A4D1S0 409 aaPredicted RBP11.79□□□□□ -0.52
LAMA4-211ENST00000518842 H0YIN7 160 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 PRELPP51888 382 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 LMOD3Q0VAK6 560 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 NPM2Q86SE8 214 aaKnown RBP11.79□□□□□ -0.52
LAMA4-211ENST00000518842 TTLL6Q8N841 843 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 CNBD1Q8NA66 436 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 RUNDC1Q96C34 613 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 ADAMTS8Q9UP79 889 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 ZNF652Q9Y2D9 606 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 DLG5Q8TDM6 1919 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 LAMB4A4D0S4 1761 aa11.79□□□□□ -0.52
LAMA4-211ENST00000518842 DLEC1Q9Y238 1755 aa11.78□□□□□ -0.52
LAMA4-211ENST00000518842 ERVV-1B6SEH8 477 aa11.78□□□□□ -0.52
LAMA4-211ENST00000518842 PDE6BP35913 854 aa11.78□□□□□ -0.52
LAMA4-211ENST00000518842 PDIA6Q15084 440 aa11.78□□□□□ -0.52
LAMA4-211ENST00000518842 HLFQ16534 295 aa11.78□□□□□ -0.52
LAMA4-211ENST00000518842 CCDC146Q8IYE0 955 aa11.78□□□□□ -0.52
LAMA4-211ENST00000518842 CCDC24Q8N4L8 307 aa11.78□□□□□ -0.52
LAMA4-211ENST00000518842 RRP7AQ9Y3A4 280 aaKnown RBP11.78□□□□□ -0.52
LAMA4-211ENST00000518842 ANKRD31Q8N7Z5 1873 aa11.77□□□□□ -0.53
LAMA4-211ENST00000518842 NFKBIEO00221 500 aa11.77□□□□□ -0.53
LAMA4-211ENST00000518842 CHL1O00533 1208 aa11.77□□□□□ -0.53
LAMA4-211ENST00000518842 ZEB1P37275 1124 aaPredicted RBP11.77□□□□□ -0.53
LAMA4-211ENST00000518842 WDR43Q15061 677 aaKnown RBP eCLIP11.77□□□□□ -0.53
LAMA4-211ENST00000518842 TTLL7Q6ZT98 887 aa11.77□□□□□ -0.53
LAMA4-211ENST00000518842 ZNF526Q8TF50 670 aaPredicted RBP11.77□□□□□ -0.53
LAMA4-211ENST00000518842 MAP3K15Q6ZN16 1313 aa11.77□□□□□ -0.53
LAMA4-211ENST00000518842 SRGNP10124 158 aa11.76□□□□□ -0.53
LAMA4-211ENST00000518842 ST5P78524 1137 aa11.76□□□□□ -0.53
LAMA4-211ENST00000518842 RASSF7Q02833 373 aa11.76□□□□□ -0.53
LAMA4-211ENST00000518842 STYK1Q6J9G0 422 aa11.76□□□□□ -0.53
LAMA4-211ENST00000518842 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
LAMA4-211ENST00000518842 NBPF5PQ86XG9 351 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-211ENST00000518842 HCSTQ9UBK5 93 aa11.76□□□□□ -0.53
LAMA4-211ENST00000518842 NIP7Q9Y221 180 aaKnown RBP eCLIP11.76□□□□□ -0.53
LAMA4-211ENST00000518842 COL11A2P13942 1736 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-211ENST00000518842 ZC3H4Q9UPT8 1303 aaKnown RBP11.76□□□□□ -0.53
LAMA4-211ENST00000518842 IBTKQ9P2D0 1353 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-211ENST00000518842 C7orf43Q8WVR3 580 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms