RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 SHPRHQ149N8 1683 aa9.71□□□□□ -0.85
CCDC6-203ENST00000518638 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.71□□□□□ -0.86
CCDC6-203ENST00000518638 LILRA1O75019 489 aa9.71□□□□□ -0.86
CCDC6-203ENST00000518638 RNF144AP50876 292 aaPredicted RBP9.71□□□□□ -0.86
CCDC6-203ENST00000518638 RIPOR1Q6ZS17 1223 aa9.71□□□□□ -0.86
CCDC6-203ENST00000518638 ALYREFQ86V81 257 aaKnown RBP9.71□□□□□ -0.86
CCDC6-203ENST00000518638 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
CCDC6-203ENST00000518638 KDF1Q8NAX2 398 aaPredicted RBP9.71□□□□□ -0.86
CCDC6-203ENST00000518638 KRTAP9-2Q9BYQ4 174 aa9.71□□□□□ -0.86
CCDC6-203ENST00000518638 GDPD2Q9HCC8 539 aa9.71□□□□□ -0.86
CCDC6-203ENST00000518638 EFCAB6Q5THR3 1501 aa9.71□□□□□ -0.86
CCDC6-203ENST00000518638 MROH1Q8NDA8 1641 aa9.71□□□□□ -0.86
CCDC6-203ENST00000518638 KRBA1A5PL33 1030 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 H7C1W4 665 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 OIP5O43482 229 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 RXRBP28702 533 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
CCDC6-203ENST00000518638 RAB15P59190 212 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 PTK2Q05397 1052 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 DBN1Q16643 649 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 GTPBP3Q969Y2 492 aaKnown RBP9.7□□□□□ -0.86
CCDC6-203ENST00000518638 OCSTAMPQ9BR26 566 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 NCOA3Q9Y6Q9 1424 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 PIK3C2BO00750 1634 aa9.7□□□□□ -0.86
CCDC6-203ENST00000518638 CFAP65Q6ZU64 1925 aaKnown RBP9.7□□□□□ -0.86
CCDC6-203ENST00000518638 FURINP09958 794 aa9.69□□□□□ -0.86
CCDC6-203ENST00000518638 MX2P20592 715 aa9.69□□□□□ -0.86
CCDC6-203ENST00000518638 ADAM32Q8TC27 787 aa9.69□□□□□ -0.86
CCDC6-203ENST00000518638 TRIM52Q96A61 297 aa9.69□□□□□ -0.86
CCDC6-203ENST00000518638 POM121Q96HA1 1249 aa9.69□□□□□ -0.86
CCDC6-203ENST00000518638 DUOX2Q9NRD8 1548 aa9.69□□□□□ -0.86
CCDC6-203ENST00000518638 SLAIN2Q9P270 581 aa9.69□□□□□ -0.86
CCDC6-203ENST00000518638 AHDC1Q5TGY3 1603 aaPredicted RBP9.68□□□□□ -0.86
CCDC6-203ENST00000518638 ZBBXA8MT70 800 aa9.68□□□□□ -0.86
CCDC6-203ENST00000518638 ERVH48-1M5A8F1 160 aa9.68□□□□□ -0.86
CCDC6-203ENST00000518638 RAD21O60216 631 aa9.68□□□□□ -0.86
CCDC6-203ENST00000518638 ABL2P42684 1182 aa9.68□□□□□ -0.86
CCDC6-203ENST00000518638 IRF5Q13568 498 aa9.68□□□□□ -0.86
CCDC6-203ENST00000518638 MKL2Q9ULH7 1088 aa9.68□□□□□ -0.86
CCDC6-203ENST00000518638 TET3O43151 1660 aa9.67□□□□□ -0.86
CCDC6-203ENST00000518638 LRP6O75581 1613 aa9.67□□□□□ -0.86
CCDC6-203ENST00000518638 DYRK1BQ9Y463 629 aa9.67□□□□□ -0.86
CCDC6-203ENST00000518638 ERBINQ96RT1 1412 aa9.66□□□□□ -0.86
CCDC6-203ENST00000518638 FBXO45P0C2W1 286 aa9.66□□□□□ -0.86
CCDC6-203ENST00000518638 SNRPNP63162 240 aaKnown RBP9.66□□□□□ -0.86
CCDC6-203ENST00000518638 NR1H3Q13133 447 aa9.66□□□□□ -0.86
CCDC6-203ENST00000518638 KANK1Q14678 1352 aa9.65□□□□□ -0.86
CCDC6-203ENST00000518638 KRTAP9-6A0A140TA67 174 aa9.65□□□□□ -0.86
CCDC6-203ENST00000518638 OXCT2Q9BYC2 517 aaPredicted RBP9.65□□□□□ -0.86
CCDC6-203ENST00000518638 ADGRB3O60242 1522 aa9.65□□□□□ -0.86
CCDC6-203ENST00000518638 CHD2O14647 1828 aaKnown RBP9.64□□□□□ -0.87
CCDC6-203ENST00000518638 GPC1P35052 558 aa9.64□□□□□ -0.87
CCDC6-203ENST00000518638 MAP2K3P46734 347 aa9.64□□□□□ -0.87
CCDC6-203ENST00000518638 CLUAP1Q96AJ1 413 aa9.64□□□□□ -0.87
CCDC6-203ENST00000518638 GAS2L1Q99501 681 aaPredicted RBP9.64□□□□□ -0.87
CCDC6-203ENST00000518638 WASHC4Q2M389 1173 aa9.63□□□□□ -0.87
CCDC6-203ENST00000518638 SLC26A8Q96RN1 970 aa9.63□□□□□ -0.87
CCDC6-203ENST00000518638 LMTK2Q8IWU2 1503 aa9.62□□□□□ -0.87
CCDC6-203ENST00000518638 A6NJR5 290 aa9.62□□□□□ -0.87
CCDC6-203ENST00000518638 COL8A1P27658 744 aa9.62□□□□□ -0.87
CCDC6-203ENST00000518638 DZIP3Q86Y13 1208 aaKnown RBP9.62□□□□□ -0.87
CCDC6-203ENST00000518638 WWC1Q8IX03 1113 aa9.62□□□□□ -0.87
CCDC6-203ENST00000518638 CYLDQ9NQC7 956 aa9.62□□□□□ -0.87
CCDC6-203ENST00000518638 DIP2AQ14689 1571 aa9.62□□□□□ -0.87
CCDC6-203ENST00000518638 ATAD2Q6PL18 1390 aa9.62□□□□□ -0.87
CCDC6-203ENST00000518638 ESPNB1AK53 854 aa9.61□□□□□ -0.87
CCDC6-203ENST00000518638 C14orf37Q86TY3 774 aa9.61□□□□□ -0.87
CCDC6-203ENST00000518638 ZNF330Q9Y3S2 320 aaPredicted RBP9.61□□□□□ -0.87
CCDC6-203ENST00000518638 MYOM3Q5VTT5 1437 aa9.61□□□□□ -0.87
CCDC6-203ENST00000518638 PLEKHG1Q9ULL1 1385 aa9.61□□□□□ -0.87
CCDC6-203ENST00000518638 RGS12O14924 1447 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 DCCP43146 1447 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 SHISA8B8ZZ34 492 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 ATP5J2-PTCD1G3V325 749 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 MEN1O00255 615 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 ATF3P18847 181 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 RBM6P78332 1123 aaKnown RBP9.6□□□□□ -0.87
CCDC6-203ENST00000518638 SEPT12Q8IYM1 358 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 NGLY1Q96IV0 654 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 C19orf44Q9H6X5 657 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 RRAGCQ9HB90 399 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 SLC52A1Q9NWF4 448 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 PIK3R4Q99570 1358 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 KIF15Q9NS87 1388 aa9.6□□□□□ -0.87
CCDC6-203ENST00000518638 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.59□□□□□ -0.87
CCDC6-203ENST00000518638 AFF2P51816 1311 aa9.59□□□□□ -0.87
CCDC6-203ENST00000518638 CROCC2H7BZ55 1655 aa9.59□□□□□ -0.87
CCDC6-203ENST00000518638 VAC14Q08AM6 782 aa9.59□□□□□ -0.87
CCDC6-203ENST00000518638 IDI1Q13907 227 aa9.59□□□□□ -0.87
CCDC6-203ENST00000518638 FNBP4Q8N3X1 1017 aaPredicted RBP9.59□□□□□ -0.87
CCDC6-203ENST00000518638 NUCKS1Q9H1E3 243 aaKnown RBP9.59□□□□□ -0.87
CCDC6-203ENST00000518638 RPRD2Q5VT52 1461 aaKnown RBP9.59□□□□□ -0.87
CCDC6-203ENST00000518638 NOS1P29475 1434 aa9.58□□□□□ -0.88
CCDC6-203ENST00000518638 SETD5Q9C0A6 1442 aa9.58□□□□□ -0.88
CCDC6-203ENST00000518638 PPP1R15AO75807 674 aaPredicted RBP9.58□□□□□ -0.88
CCDC6-203ENST00000518638 MCCD1P59942 119 aaPredicted RBP9.58□□□□□ -0.88
CCDC6-203ENST00000518638 POU4F2Q12837 409 aa9.58□□□□□ -0.88
CCDC6-203ENST00000518638 GRIN2CQ14957 1233 aa9.58□□□□□ -0.88
CCDC6-203ENST00000518638 ZNF592Q92610 1267 aa9.58□□□□□ -0.88
CCDC6-203ENST00000518638 GDF2Q9UK05 429 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms