RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 RBM17Q96I25 401 aaKnown RBP11.94□□□□□ -0.5
PVT1-207ENST00000518528 VPS33BQ9H267 617 aa11.94□□□□□ -0.5
PVT1-207ENST00000518528 VIRMAQ69YN4 1812 aaKnown RBP11.94□□□□□ -0.5
PVT1-207ENST00000518528 PDE4DIPQ5VU43 2346 aa11.93□□□□□ -0.5
PVT1-207ENST00000518528 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
PVT1-207ENST00000518528 CRY2Q49AN0 593 aa11.93□□□□□ -0.5
PVT1-207ENST00000518528 RTF1Q92541 710 aaKnown RBP11.93□□□□□ -0.5
PVT1-207ENST00000518528 GPRC5DQ9NZD1 345 aa11.93□□□□□ -0.5
PVT1-207ENST00000518528 ADAMTSL1Q8N6G6 1762 aa11.92□□□□□ -0.5
PVT1-207ENST00000518528 KCNQ3O43525 872 aa11.92□□□□□ -0.5
PVT1-207ENST00000518528 HOXA10P31260 410 aaPredicted RBP11.92□□□□□ -0.5
PVT1-207ENST00000518528 CIAPIN1Q6FI81 312 aa11.92□□□□□ -0.5
PVT1-207ENST00000518528 SUPT20HQ8NEM7 779 aa11.92□□□□□ -0.5
PVT1-207ENST00000518528 ZC3H15Q8WU90 426 aaKnown RBP11.92□□□□□ -0.5
PVT1-207ENST00000518528 ZNF408Q9H9D4 720 aa11.92□□□□□ -0.5
PVT1-207ENST00000518528 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
PVT1-207ENST00000518528 PPEF1O14829 653 aaPredicted RBP11.91□□□□□ -0.5
PVT1-207ENST00000518528 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
PVT1-207ENST00000518528 CRAMP1Q96RY5 1269 aa11.91□□□□□ -0.5
PVT1-207ENST00000518528 BCL2L13Q9BXK5 485 aa11.91□□□□□ -0.5
PVT1-207ENST00000518528 ZNRF3Q9ULT6 936 aa11.91□□□□□ -0.5
PVT1-207ENST00000518528 KIF7Q2M1P5 1343 aa11.9□□□□□ -0.5
PVT1-207ENST00000518528 CDHR2Q9BYE9 1310 aa11.9□□□□□ -0.5
PVT1-207ENST00000518528 ERVV-1B6SEH8 477 aa11.9□□□□□ -0.5
PVT1-207ENST00000518528 TNIP1Q15025 636 aa11.9□□□□□ -0.5
PVT1-207ENST00000518528 PRPF38BQ5VTL8 546 aaKnown RBP11.9□□□□□ -0.5
PVT1-207ENST00000518528 KIF6Q6ZMV9 814 aa11.9□□□□□ -0.5
PVT1-207ENST00000518528 NUTM1Q86Y26 1132 aa11.9□□□□□ -0.5
PVT1-207ENST00000518528 GLIS2Q9BZE0 524 aaPredicted RBP11.9□□□□□ -0.5
PVT1-207ENST00000518528 UBR2Q8IWV8 1755 aa11.9□□□□□ -0.51
PVT1-207ENST00000518528 THSD7BQ9C0I4 1608 aa11.89□□□□□ -0.51
PVT1-207ENST00000518528 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
PVT1-207ENST00000518528 TCERG1O14776 1098 aaKnown RBP11.89□□□□□ -0.51
PVT1-207ENST00000518528 GMPSP49915 693 aaPredicted RBP11.89□□□□□ -0.51
PVT1-207ENST00000518528 HUNKP57058 714 aa11.89□□□□□ -0.51
PVT1-207ENST00000518528 HLFQ16534 295 aa11.89□□□□□ -0.51
PVT1-207ENST00000518528 CC2D1BQ5T0F9 858 aaKnown RBP11.89□□□□□ -0.51
PVT1-207ENST00000518528 NBPF10Q6P3W6 841 aaKnown RBP11.89□□□□□ -0.51
PVT1-207ENST00000518528 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
PVT1-207ENST00000518528 SAGE1Q9NXZ1 904 aa11.89□□□□□ -0.51
PVT1-207ENST00000518528 PGAP2Q9UHJ9 254 aa11.89□□□□□ -0.51
PVT1-207ENST00000518528 NPC1L1Q9UHC9 1359 aa11.89□□□□□ -0.51
PVT1-207ENST00000518528 ARFGEF2Q9Y6D5 1785 aa11.88□□□□□ -0.51
PVT1-207ENST00000518528 PRAMEF22A3QJZ6 481 aa11.88□□□□□ -0.51
PVT1-207ENST00000518528 H7C1D1 291 aa11.88□□□□□ -0.51
PVT1-207ENST00000518528 SOX10P56693 466 aa11.88□□□□□ -0.51
PVT1-207ENST00000518528 CXCL9Q07325 125 aa11.88□□□□□ -0.51
PVT1-207ENST00000518528 AOC3Q16853 763 aa11.88□□□□□ -0.51
PVT1-207ENST00000518528 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
PVT1-207ENST00000518528 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
PVT1-207ENST00000518528 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
PVT1-207ENST00000518528 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
PVT1-207ENST00000518528 SNED1Q8TER0 1413 aa11.87□□□□□ -0.51
PVT1-207ENST00000518528 PRKAR2BP31323 418 aa11.87□□□□□ -0.51
PVT1-207ENST00000518528 PPP1R42Q7Z4L9 355 aa11.87□□□□□ -0.51
PVT1-207ENST00000518528 NGEFQ8N5V2 710 aa11.87□□□□□ -0.51
PVT1-207ENST00000518528 C2orf69Q8N8R5 385 aa11.87□□□□□ -0.51
PVT1-207ENST00000518528 NLRP3Q96P20 1036 aa11.87□□□□□ -0.51
PVT1-207ENST00000518528 ATP6V0A2Q9Y487 856 aa11.87□□□□□ -0.51
PVT1-207ENST00000518528 ABCC12Q96J65 1359 aa11.87□□□□□ -0.51
PVT1-207ENST00000518528 IBTKQ9P2D0 1353 aaPredicted RBP11.87□□□□□ -0.51
PVT1-207ENST00000518528 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
PVT1-207ENST00000518528 RGMBQ6NW40 437 aa11.86□□□□□ -0.51
PVT1-207ENST00000518528 DPP8Q6V1X1 898 aaPredicted RBP11.86□□□□□ -0.51
PVT1-207ENST00000518528 HTATSF1O43719 755 aaKnown RBP11.85□□□□□ -0.51
PVT1-207ENST00000518528 BBOX1O75936 387 aa11.85□□□□□ -0.51
PVT1-207ENST00000518528 GPTP24298 496 aa11.85□□□□□ -0.51
PVT1-207ENST00000518528 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
PVT1-207ENST00000518528 PARP10Q53GL7 1025 aa11.85□□□□□ -0.51
PVT1-207ENST00000518528 MCM10Q7L590 875 aa11.85□□□□□ -0.51
PVT1-207ENST00000518528 USP48Q86UV5 1035 aa11.85□□□□□ -0.51
PVT1-207ENST00000518528 MPNDQ8N594 471 aa11.85□□□□□ -0.51
PVT1-207ENST00000518528 PHACTR3Q96KR7 559 aa11.85□□□□□ -0.51
PVT1-207ENST00000518528 RTFDC1Q9BY42 306 aaPredicted RBP11.85□□□□□ -0.51
PVT1-207ENST00000518528 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
PVT1-207ENST00000518528 RIC1Q4ADV7 1423 aa11.85□□□□□ -0.51
PVT1-207ENST00000518528 TRPA1O75762 1119 aa11.84□□□□□ -0.51
PVT1-207ENST00000518528 RAD17O75943 681 aa11.84□□□□□ -0.51
PVT1-207ENST00000518528 ZNF157P51786 506 aaPredicted RBP11.84□□□□□ -0.51
PVT1-207ENST00000518528 SUSD4Q5VX71 490 aa11.84□□□□□ -0.51
PVT1-207ENST00000518528 KRT26Q7Z3Y9 468 aa11.84□□□□□ -0.51
PVT1-207ENST00000518528 CTU1Q7Z7A3 348 aaKnown RBP11.84□□□□□ -0.51
PVT1-207ENST00000518528 REM2Q8IYK8 340 aaPredicted RBP11.84□□□□□ -0.51
PVT1-207ENST00000518528 PNISRQ8TF01 805 aaKnown RBP11.84□□□□□ -0.51
PVT1-207ENST00000518528 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
PVT1-207ENST00000518528 GBA2Q9HCG7 927 aaPredicted RBP11.84□□□□□ -0.51
PVT1-207ENST00000518528 RRP7AQ9Y3A4 280 aaKnown RBP11.84□□□□□ -0.51
PVT1-207ENST00000518528 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
PVT1-207ENST00000518528 BCORQ6W2J9 1755 aa11.83□□□□□ -0.52
PVT1-207ENST00000518528 HIRAP54198 1017 aaPredicted RBP11.83□□□□□ -0.52
PVT1-207ENST00000518528 KIF23Q02241 960 aaPredicted RBP11.83□□□□□ -0.52
PVT1-207ENST00000518528 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
PVT1-207ENST00000518528 PKN2Q16513 984 aaKnown RBP11.83□□□□□ -0.52
PVT1-207ENST00000518528 SP8Q8IXZ3 490 aa11.83□□□□□ -0.52
PVT1-207ENST00000518528 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
PVT1-207ENST00000518528 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
PVT1-207ENST00000518528 DCPSQ96C86 337 aaKnown RBP11.83□□□□□ -0.52
PVT1-207ENST00000518528 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
PVT1-207ENST00000518528 COL4A5P29400 1685 aa11.83□□□□□ -0.52
PVT1-207ENST00000518528 CACNA1SQ13698 1873 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms