RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 CHMP3Q9Y3E7 222 aa8.31□□□□□ -1.08
SMN1-210ENST00000518504 PSAPL1Q6NUJ1 521 aa8.3□□□□□ -1.08
SMN1-210ENST00000518504 AFF1P51825 1210 aaKnown RBP8.29□□□□□ -1.08
SMN1-210ENST00000518504 CLDN10P78369 228 aa8.29□□□□□ -1.08
SMN1-210ENST00000518504 NFATC2IPQ8NCF5 419 aa8.29□□□□□ -1.08
SMN1-210ENST00000518504 DNAJB12Q9NXW2 375 aaKnown RBP8.29□□□□□ -1.08
SMN1-210ENST00000518504 NAGPAQ9UK23 515 aa8.29□□□□□ -1.08
SMN1-210ENST00000518504 PPP1R12BO60237 982 aaPredicted RBP8.28□□□□□ -1.08
SMN1-210ENST00000518504 BTLAQ7Z6A9 289 aa8.28□□□□□ -1.08
SMN1-210ENST00000518504 FMR1NBQ8N0W7 255 aaPredicted RBP8.28□□□□□ -1.08
SMN1-210ENST00000518504 TSEN2Q8NCE0 465 aaKnown RBP8.28□□□□□ -1.08
SMN1-210ENST00000518504 NGLY1Q96IV0 654 aa8.28□□□□□ -1.08
SMN1-210ENST00000518504 HIRAP54198 1017 aaPredicted RBP8.27□□□□□ -1.09
SMN1-210ENST00000518504 TRIM50Q86XT4 487 aa8.27□□□□□ -1.09
SMN1-210ENST00000518504 ALDH16A1Q8IZ83 802 aa8.27□□□□□ -1.09
SMN1-210ENST00000518504 RGS9O75916 674 aaPredicted RBP8.26□□□□□ -1.09
SMN1-210ENST00000518504 POM121Q96HA1 1249 aa8.26□□□□□ -1.09
SMN1-210ENST00000518504 SSBP4Q9BWG4 385 aaPredicted RBP8.26□□□□□ -1.09
SMN1-210ENST00000518504 USP17L3A6NCW0 530 aa8.25□□□□□ -1.09
SMN1-210ENST00000518504 USP17L4A6NCW7 530 aa8.25□□□□□ -1.09
SMN1-210ENST00000518504 C21orf2O43822 256 aa8.25□□□□□ -1.09
SMN1-210ENST00000518504 NFKB1P19838 968 aa8.25□□□□□ -1.09
SMN1-210ENST00000518504 USP17L2Q6R6M4 530 aa8.25□□□□□ -1.09
SMN1-210ENST00000518504 USP17L1Q7RTZ2 530 aa8.25□□□□□ -1.09
SMN1-210ENST00000518504 CHMP7Q8WUX9 453 aaPredicted RBP8.25□□□□□ -1.09
SMN1-210ENST00000518504 ZNF594Q96JF6 807 aaPredicted RBP8.25□□□□□ -1.09
SMN1-210ENST00000518504 PNMA5Q96PV4 448 aa8.25□□□□□ -1.09
SMN1-210ENST00000518504 GSX2Q9BZM3 304 aa8.25□□□□□ -1.09
SMN1-210ENST00000518504 POM121CA8CG34 1229 aa8.24□□□□□ -1.09
SMN1-210ENST00000518504 CPB1P15086 417 aa8.24□□□□□ -1.09
SMN1-210ENST00000518504 IREB2P48200 963 aaKnown RBP8.24□□□□□ -1.09
SMN1-210ENST00000518504 ATP1A2P50993 1020 aa8.24□□□□□ -1.09
SMN1-210ENST00000518504 POTEAQ6S8J7 498 aa8.24□□□□□ -1.09
SMN1-210ENST00000518504 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
SMN1-210ENST00000518504 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
SMN1-210ENST00000518504 PLAURQ03405 335 aa8.23□□□□□ -1.09
SMN1-210ENST00000518504 GAS2L2Q8NHY3 880 aa8.23□□□□□ -1.09
SMN1-210ENST00000518504 ADAMTS19Q8TE59 1207 aa8.23□□□□□ -1.09
SMN1-210ENST00000518504 WFDC12Q8WWY7 111 aa8.23□□□□□ -1.09
SMN1-210ENST00000518504 LGR5O75473 907 aa8.22□□□□□ -1.09
SMN1-210ENST00000518504 MSL1Q68DK7 614 aa8.22□□□□□ -1.09
SMN1-210ENST00000518504 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
SMN1-210ENST00000518504 FAM35AQ86V20 835 aa8.22□□□□□ -1.09
SMN1-210ENST00000518504 KRTAP19-1Q8IUB9 90 aa8.22□□□□□ -1.09
SMN1-210ENST00000518504 SCG3Q8WXD2 468 aaKnown RBP8.22□□□□□ -1.09
SMN1-210ENST00000518504 MKRN1Q9UHC7 482 aaKnown RBP8.22□□□□□ -1.09
SMN1-210ENST00000518504 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
SMN1-210ENST00000518504 NOS3P29474 1203 aa8.21□□□□□ -1.1
SMN1-210ENST00000518504 MLLT1Q03111 559 aaPredicted RBP8.21□□□□□ -1.1
SMN1-210ENST00000518504 CCINQ13939 588 aa8.21□□□□□ -1.1
SMN1-210ENST00000518504 ILDR2Q71H61 639 aa8.21□□□□□ -1.1
SMN1-210ENST00000518504 UCN2Q96RP3 112 aa8.21□□□□□ -1.1
SMN1-210ENST00000518504 PALM3A6NDB9 673 aaPredicted RBP8.2□□□□□ -1.1
SMN1-210ENST00000518504 PLEKHM2Q8IWE5 1019 aa8.2□□□□□ -1.1
SMN1-210ENST00000518504 MEGF10Q96KG7 1140 aa8.2□□□□□ -1.1
SMN1-210ENST00000518504 C2orf49Q9BVC5 232 aaPredicted RBP8.2□□□□□ -1.1
SMN1-210ENST00000518504 KRTAP9-9Q9BYP9 154 aa8.2□□□□□ -1.1
SMN1-210ENST00000518504 KRTAP9-4Q9BYQ2 154 aa8.2□□□□□ -1.1
SMN1-210ENST00000518504 M0R2N6 131 aa8.19□□□□□ -1.1
SMN1-210ENST00000518504 GRNP28799 593 aaKnown RBP8.19□□□□□ -1.1
SMN1-210ENST00000518504 GRIK5Q16478 980 aa8.19□□□□□ -1.1
SMN1-210ENST00000518504 PERM1Q5SV97 790 aa8.19□□□□□ -1.1
SMN1-210ENST00000518504 FBXO11Q86XK2 927 aa8.19□□□□□ -1.1
SMN1-210ENST00000518504 WWC1Q8IX03 1113 aa8.19□□□□□ -1.1
SMN1-210ENST00000518504 LARGE2Q8N3Y3 721 aa8.19□□□□□ -1.1
SMN1-210ENST00000518504 LPIN3Q9BQK8 851 aa8.19□□□□□ -1.1
SMN1-210ENST00000518504 BCS1LQ9Y276 419 aa8.19□□□□□ -1.1
SMN1-210ENST00000518504 ATP9BO43861 1147 aa8.18□□□□□ -1.1
SMN1-210ENST00000518504 TPRNQ4KMQ1 711 aa8.18□□□□□ -1.1
SMN1-210ENST00000518504 HDGFL1Q5TGJ6 251 aa8.18□□□□□ -1.1
SMN1-210ENST00000518504 RNF112Q9ULX5 631 aa8.18□□□□□ -1.1
SMN1-210ENST00000518504 RBM19Q9Y4C8 960 aaKnown RBP8.18□□□□□ -1.1
SMN1-210ENST00000518504 ZBTB42B2RXF5 422 aa8.17□□□□□ -1.1
SMN1-210ENST00000518504 DKK1O94907 266 aa8.17□□□□□ -1.1
SMN1-210ENST00000518504 ELMSAN1Q6PJG2 1045 aa8.17□□□□□ -1.1
SMN1-210ENST00000518504 WFDC8Q8IUA0 241 aa8.17□□□□□ -1.1
SMN1-210ENST00000518504 SIX5Q8N196 739 aa8.17□□□□□ -1.1
SMN1-210ENST00000518504 ZFATQ9P243 1243 aa8.17□□□□□ -1.1
SMN1-210ENST00000518504 HIF1AQ16665 826 aa8.16□□□□□ -1.1
SMN1-210ENST00000518504 HFE2Q6ZVN8 426 aa8.16□□□□□ -1.1
SMN1-210ENST00000518504 EFCC1Q9HA90 598 aa8.16□□□□□ -1.1
SMN1-210ENST00000518504 GOLGA2P5Q9HBQ8 144 aa8.16□□□□□ -1.1
SMN1-210ENST00000518504 DMGDHQ9UI17 866 aaKnown RBP8.16□□□□□ -1.1
SMN1-210ENST00000518504 BTBD11A6QL63 1104 aa8.15□□□□□ -1.1
SMN1-210ENST00000518504 TGFBR3LH3BV60 316 aa8.15□□□□□ -1.1
SMN1-210ENST00000518504 ALX3O95076 343 aa8.15□□□□□ -1.1
SMN1-210ENST00000518504 RASA1P20936 1047 aa8.15□□□□□ -1.1
SMN1-210ENST00000518504 TARSP26639 723 aaKnown RBP8.15□□□□□ -1.1
SMN1-210ENST00000518504 SSTR4P31391 388 aa8.15□□□□□ -1.1
SMN1-210ENST00000518504 MCTP1Q6DN14 999 aa8.15□□□□□ -1.1
SMN1-210ENST00000518504 PRR23CQ6ZRP0 262 aa8.15□□□□□ -1.1
SMN1-210ENST00000518504 DHX32Q7L7V1 743 aaKnown RBP8.15□□□□□ -1.1
SMN1-210ENST00000518504 PCMTD2Q9NV79 361 aa8.15□□□□□ -1.1
SMN1-210ENST00000518504 KLK14Q9P0G3 267 aa8.15□□□□□ -1.1
SMN1-210ENST00000518504 DEAF1O75398 565 aaPredicted RBP8.14□□□□□ -1.11
SMN1-210ENST00000518504 RTN1Q16799 776 aa8.14□□□□□ -1.11
SMN1-210ENST00000518504 IGF2-ASQ6U949 168 aa8.14□□□□□ -1.11
SMN1-210ENST00000518504 STAG2Q8N3U4 1231 aa8.14□□□□□ -1.11
SMN1-210ENST00000518504 DTWD1Q8N5C7 304 aa8.14□□□□□ -1.11
SMN1-210ENST00000518504 HINFPQ9BQA5 517 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms