RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 COL4A1P02462 1669 aa15.89■□□□□ 0.13
MRPS28-202ENST00000518271 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
MRPS28-202ENST00000518271 OLFM4Q6UX06 510 aa15.89■□□□□ 0.13
MRPS28-202ENST00000518271 SLC51AQ86UW1 340 aa15.89■□□□□ 0.13
MRPS28-202ENST00000518271 TSR2Q969E8 191 aaKnown RBP15.89■□□□□ 0.13
MRPS28-202ENST00000518271 NMRK2Q9NPI5 230 aa15.89■□□□□ 0.13
MRPS28-202ENST00000518271 DBF4Q9UBU7 674 aaPredicted RBP15.89■□□□□ 0.13
MRPS28-202ENST00000518271 ZC3H4Q9UPT8 1303 aaKnown RBP15.89■□□□□ 0.13
MRPS28-202ENST00000518271 LRRC37AA6NMS7 1700 aa15.88■□□□□ 0.13
MRPS28-202ENST00000518271 WDR90Q96KV7 1748 aa15.88■□□□□ 0.13
MRPS28-202ENST00000518271 PARP10Q53GL7 1025 aa15.88■□□□□ 0.13
MRPS28-202ENST00000518271 NLRP10Q86W26 655 aa15.88■□□□□ 0.13
MRPS28-202ENST00000518271 TSPYL6Q8N831 410 aa15.88■□□□□ 0.13
MRPS28-202ENST00000518271 COL4A5P29400 1685 aa15.87■□□□□ 0.13
MRPS28-202ENST00000518271 ELL2O00472 640 aaPredicted RBP15.87■□□□□ 0.13
MRPS28-202ENST00000518271 TCIRG1Q13488 830 aa15.87■□□□□ 0.13
MRPS28-202ENST00000518271 GTF2E1P29083 439 aaPredicted RBP15.86■□□□□ 0.13
MRPS28-202ENST00000518271 HOXA10P31260 410 aaPredicted RBP15.86■□□□□ 0.13
MRPS28-202ENST00000518271 SYNE4Q8N205 404 aa15.86■□□□□ 0.13
MRPS28-202ENST00000518271 PLBD2Q8NHP8 589 aa15.86■□□□□ 0.13
MRPS28-202ENST00000518271 ISCA1Q9BUE6 129 aa15.86■□□□□ 0.13
MRPS28-202ENST00000518271 IL16Q14005 1332 aa15.86■□□□□ 0.13
MRPS28-202ENST00000518271 RNF123Q5XPI4 1314 aa15.86■□□□□ 0.13
MRPS28-202ENST00000518271 HSP90AB3PQ58FF7 597 aa15.85■□□□□ 0.13
MRPS28-202ENST00000518271 SLC10A5Q5PT55 438 aa15.85■□□□□ 0.13
MRPS28-202ENST00000518271 PPP1R42Q7Z4L9 355 aa15.85■□□□□ 0.13
MRPS28-202ENST00000518271 UTP14AQ9BVJ6 771 aaKnown RBP15.85■□□□□ 0.13
MRPS28-202ENST00000518271 TAOK3Q9H2K8 898 aa15.85■□□□□ 0.13
MRPS28-202ENST00000518271 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
MRPS28-202ENST00000518271 HYPKQ9NX55 129 aa15.85■□□□□ 0.13
MRPS28-202ENST00000518271 CCDC93Q567U6 631 aa15.84■□□□□ 0.13
MRPS28-202ENST00000518271 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
MRPS28-202ENST00000518271 ZNF428Q96B54 188 aa15.84■□□□□ 0.13
MRPS28-202ENST00000518271 MYH3P11055 1940 aa15.84■□□□□ 0.13
MRPS28-202ENST00000518271 LTBP1Q14766 1721 aa15.83■□□□□ 0.13
MRPS28-202ENST00000518271 SOGA3Q5TF21 947 aa15.83■□□□□ 0.12
MRPS28-202ENST00000518271 FANCIQ9NVI1 1328 aa15.83■□□□□ 0.12
MRPS28-202ENST00000518271 ALDH1B1P30837 517 aa15.82■□□□□ 0.12
MRPS28-202ENST00000518271 CRAMP1Q96RY5 1269 aa15.82■□□□□ 0.12
MRPS28-202ENST00000518271 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
MRPS28-202ENST00000518271 DUOX1Q9NRD9 1551 aa15.82■□□□□ 0.12
MRPS28-202ENST00000518271 GLTPD2A6NH11 291 aa15.81■□□□□ 0.12
MRPS28-202ENST00000518271 ATP5J2-PTCD1G3V325 749 aa15.81■□□□□ 0.12
MRPS28-202ENST00000518271 ABCC4O15439 1325 aa15.81■□□□□ 0.12
MRPS28-202ENST00000518271 HCLS1P14317 486 aaPredicted RBP15.81■□□□□ 0.12
MRPS28-202ENST00000518271 FKBP4Q02790 459 aaKnown RBP eCLIP15.81■□□□□ 0.12
MRPS28-202ENST00000518271 KDM2BQ8NHM5 1336 aa15.81■□□□□ 0.12
MRPS28-202ENST00000518271 SH3TC1Q8TE82 1336 aa15.81■□□□□ 0.12
MRPS28-202ENST00000518271 RPGRQ92834 1020 aaKnown RBP15.81■□□□□ 0.12
MRPS28-202ENST00000518271 SCN4AP35499 1836 aa15.8■□□□□ 0.12
MRPS28-202ENST00000518271 ZNF521Q96K83 1311 aa15.8■□□□□ 0.12
MRPS28-202ENST00000518271 POTECB2RU33 542 aa15.8■□□□□ 0.12
MRPS28-202ENST00000518271 TRIM28Q13263 835 aaKnown RBP15.8■□□□□ 0.12
MRPS28-202ENST00000518271 WDR63Q8IWG1 891 aa15.8■□□□□ 0.12
MRPS28-202ENST00000518271 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
MRPS28-202ENST00000518271 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
MRPS28-202ENST00000518271 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
MRPS28-202ENST00000518271 TWISTNBQ3B726 338 aaPredicted RBP15.79■□□□□ 0.12
MRPS28-202ENST00000518271 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
MRPS28-202ENST00000518271 NLRP3Q96P20 1036 aa15.79■□□□□ 0.12
MRPS28-202ENST00000518271 RRAGCQ9HB90 399 aa15.79■□□□□ 0.12
MRPS28-202ENST00000518271 ZNF277Q9NRM2 450 aaPredicted RBP15.79■□□□□ 0.12
MRPS28-202ENST00000518271 SPEF2Q9C093 1822 aa15.78■□□□□ 0.12
MRPS28-202ENST00000518271 TCERG1O14776 1098 aaKnown RBP15.78■□□□□ 0.12
MRPS28-202ENST00000518271 PPEF1O14829 653 aaPredicted RBP15.78■□□□□ 0.12
MRPS28-202ENST00000518271 TOMM70O94826 608 aa15.78■□□□□ 0.12
MRPS28-202ENST00000518271 GOLGA2Q08379 1002 aa15.78■□□□□ 0.12
MRPS28-202ENST00000518271 G2E3Q7L622 706 aa15.78■□□□□ 0.12
MRPS28-202ENST00000518271 RTKN2Q8IZC4 609 aa15.78■□□□□ 0.12
MRPS28-202ENST00000518271 RBM17Q96I25 401 aaKnown RBP15.78■□□□□ 0.12
MRPS28-202ENST00000518271 PSMD1Q99460 953 aa15.78■□□□□ 0.12
MRPS28-202ENST00000518271 ADAMTSL1Q8N6G6 1762 aa15.77■□□□□ 0.12
MRPS28-202ENST00000518271 ZNF541Q9H0D2 1346 aa15.77■□□□□ 0.12
MRPS28-202ENST00000518271 RIC3Q7Z5B4 369 aa15.77■□□□□ 0.12
MRPS28-202ENST00000518271 FAM89AQ96GI7 184 aa15.77■□□□□ 0.12
MRPS28-202ENST00000518271 CC2D2BQ6DHV5 1058 aa15.76■□□□□ 0.11
MRPS28-202ENST00000518271 RBM46Q8TBY0 533 aaKnown RBP15.76■□□□□ 0.11
MRPS28-202ENST00000518271 MYD88Q99836 296 aa15.76■□□□□ 0.11
MRPS28-202ENST00000518271 IGKV5-2P06315 115 aa15.75■□□□□ 0.11
MRPS28-202ENST00000518271 HSPA6P17066 643 aa15.75■□□□□ 0.11
MRPS28-202ENST00000518271 IARSP41252 1262 aaKnown RBP15.75■□□□□ 0.11
MRPS28-202ENST00000518271 EXOSC9Q06265 439 aaKnown RBP15.75■□□□□ 0.11
MRPS28-202ENST00000518271 METTL22Q9BUU2 404 aaPredicted RBP15.75■□□□□ 0.11
MRPS28-202ENST00000518271 ATP6V0A2Q9Y487 856 aa15.75■□□□□ 0.11
MRPS28-202ENST00000518271 VAMP4O75379 141 aa15.74■□□□□ 0.11
MRPS28-202ENST00000518271 DDNO94850 711 aaPredicted RBP15.74■□□□□ 0.11
MRPS28-202ENST00000518271 SF3B3Q15393 1217 aaKnown RBP15.74■□□□□ 0.11
MRPS28-202ENST00000518271 RTL5Q5HYW3 569 aaPredicted RBP15.74■□□□□ 0.11
MRPS28-202ENST00000518271 MAP3K2Q9Y2U5 619 aa15.74■□□□□ 0.11
MRPS28-202ENST00000518271 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
MRPS28-202ENST00000518271 FZD9O00144 591 aa15.73■□□□□ 0.11
MRPS28-202ENST00000518271 IRS4O14654 1257 aaPredicted RBP15.73■□□□□ 0.11
MRPS28-202ENST00000518271 GRAPQ13588 217 aa15.73■□□□□ 0.11
MRPS28-202ENST00000518271 KSR2Q6VAB6 950 aa15.73■□□□□ 0.11
MRPS28-202ENST00000518271 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
MRPS28-202ENST00000518271 ZBTB38Q8NAP3 1195 aaPredicted RBP15.73■□□□□ 0.11
MRPS28-202ENST00000518271 CCDC191Q8NCU4 936 aa15.73■□□□□ 0.11
MRPS28-202ENST00000518271 GRAPLQ8TC17 118 aaPredicted RBP15.73■□□□□ 0.11
MRPS28-202ENST00000518271 PCNTO95613 3336 aa15.73■□□□□ 0.11
MRPS28-202ENST00000518271 PCCAP05165 728 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms