RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 MAP3K13O43283 966 aa16.52■□□□□ 0.24
PABPC1-205ENST00000518196 GYS1P13807 737 aa16.52■□□□□ 0.24
PABPC1-205ENST00000518196 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
PABPC1-205ENST00000518196 KSR2Q6VAB6 950 aa16.52■□□□□ 0.24
PABPC1-205ENST00000518196 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.24
PABPC1-205ENST00000518196 NLGN1Q8N2Q7 840 aa16.52■□□□□ 0.24
PABPC1-205ENST00000518196 NOB1Q9ULX3 412 aaKnown RBP16.52■□□□□ 0.24
PABPC1-205ENST00000518196 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
PABPC1-205ENST00000518196 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
PABPC1-205ENST00000518196 HLFQ16534 295 aa16.51■□□□□ 0.23
PABPC1-205ENST00000518196 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
PABPC1-205ENST00000518196 FRAT1Q92837 279 aaPredicted RBP16.51■□□□□ 0.23
PABPC1-205ENST00000518196 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
PABPC1-205ENST00000518196 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
PABPC1-205ENST00000518196 KIF12Q96FN5 646 aa16.5■□□□□ 0.23
PABPC1-205ENST00000518196 API5Q9BZZ5 524 aaKnown RBP16.5■□□□□ 0.23
PABPC1-205ENST00000518196 PDGFDQ9GZP0 370 aaPredicted RBP16.5■□□□□ 0.23
PABPC1-205ENST00000518196 BCL2L12Q9HB09 334 aa16.5■□□□□ 0.23
PABPC1-205ENST00000518196 MAP3K2Q9Y2U5 619 aa16.5■□□□□ 0.23
PABPC1-205ENST00000518196 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
PABPC1-205ENST00000518196 NEXNQ0ZGT2 675 aa16.49■□□□□ 0.23
PABPC1-205ENST00000518196 TCIRG1Q13488 830 aa16.49■□□□□ 0.23
PABPC1-205ENST00000518196 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
PABPC1-205ENST00000518196 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.49■□□□□ 0.23
PABPC1-205ENST00000518196 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
PABPC1-205ENST00000518196 SGIP1Q9BQI5 828 aa16.49■□□□□ 0.23
PABPC1-205ENST00000518196 ARFGEF2Q9Y6D5 1785 aa16.49■□□□□ 0.23
PABPC1-205ENST00000518196 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
PABPC1-205ENST00000518196 IFNL1Q8IU54 200 aa16.48■□□□□ 0.23
PABPC1-205ENST00000518196 METTL22Q9BUU2 404 aaPredicted RBP16.48■□□□□ 0.23
PABPC1-205ENST00000518196 MTFR1LQ9H019 292 aa16.48■□□□□ 0.23
PABPC1-205ENST00000518196 ADCY9O60503 1353 aa16.48■□□□□ 0.23
PABPC1-205ENST00000518196 F6X3S4 739 aa16.47■□□□□ 0.23
PABPC1-205ENST00000518196 ZBTB7AO95365 584 aa16.47■□□□□ 0.23
PABPC1-205ENST00000518196 CENPBP07199 599 aaPredicted RBP16.47■□□□□ 0.23
PABPC1-205ENST00000518196 TBC1D9BQ66K14 1250 aa16.47■□□□□ 0.23
PABPC1-205ENST00000518196 BICDL1Q6ZP65 573 aa16.47■□□□□ 0.23
PABPC1-205ENST00000518196 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
PABPC1-205ENST00000518196 SETDB2Q96T68 719 aa16.47■□□□□ 0.23
PABPC1-205ENST00000518196 MYD88Q99836 296 aa16.47■□□□□ 0.23
PABPC1-205ENST00000518196 NIP7Q9Y221 180 aaKnown RBP eCLIP16.47■□□□□ 0.23
PABPC1-205ENST00000518196 MS4A1P11836 297 aa16.46■□□□□ 0.23
PABPC1-205ENST00000518196 PDAP1Q13442 181 aaKnown RBP16.46■□□□□ 0.23
PABPC1-205ENST00000518196 PARP10Q53GL7 1025 aa16.46■□□□□ 0.23
PABPC1-205ENST00000518196 SLC4A10Q6U841 1118 aa16.46■□□□□ 0.23
PABPC1-205ENST00000518196 ATF7IPQ6VMQ6 1270 aa16.46■□□□□ 0.23
PABPC1-205ENST00000518196 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.22
PABPC1-205ENST00000518196 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
PABPC1-205ENST00000518196 C19orf67A6NJJ6 358 aa16.45■□□□□ 0.22
PABPC1-205ENST00000518196 GPTP24298 496 aa16.45■□□□□ 0.22
PABPC1-205ENST00000518196 POLD1P28340 1107 aa16.45■□□□□ 0.22
PABPC1-205ENST00000518196 TM4SF1P30408 202 aa16.45■□□□□ 0.22
PABPC1-205ENST00000518196 NFIXQ14938 502 aa16.45■□□□□ 0.22
PABPC1-205ENST00000518196 ZNF34Q8IZ26 560 aa16.45■□□□□ 0.22
PABPC1-205ENST00000518196 PARP3Q9Y6F1 533 aa16.45■□□□□ 0.22
PABPC1-205ENST00000518196 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
PABPC1-205ENST00000518196 MMP10P09238 476 aa16.44■□□□□ 0.22
PABPC1-205ENST00000518196 TRIM27P14373 513 aa16.44■□□□□ 0.22
PABPC1-205ENST00000518196 TRIM28Q13263 835 aaKnown RBP16.44■□□□□ 0.22
PABPC1-205ENST00000518196 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
PABPC1-205ENST00000518196 LINS1Q8NG48 757 aa16.44■□□□□ 0.22
PABPC1-205ENST00000518196 ISCA1Q9BUE6 129 aa16.44■□□□□ 0.22
PABPC1-205ENST00000518196 SPON1Q9HCB6 807 aa16.44■□□□□ 0.22
PABPC1-205ENST00000518196 PSEN1P49768 467 aa16.43■□□□□ 0.22
PABPC1-205ENST00000518196 FTSJ3Q8IY81 847 aaKnown RBP16.43■□□□□ 0.22
PABPC1-205ENST00000518196 CCDC191Q8NCU4 936 aa16.43■□□□□ 0.22
PABPC1-205ENST00000518196 SRCIN1Q9C0H9 1055 aa16.43■□□□□ 0.22
PABPC1-205ENST00000518196 AFDNP55196 1824 aaKnown RBP16.42■□□□□ 0.22
PABPC1-205ENST00000518196 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
PABPC1-205ENST00000518196 NPHP1O15259 732 aa16.42■□□□□ 0.22
PABPC1-205ENST00000518196 ALDH1L1O75891 902 aa16.42■□□□□ 0.22
PABPC1-205ENST00000518196 SERPINB2P05120 415 aa16.42■□□□□ 0.22
PABPC1-205ENST00000518196 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
PABPC1-205ENST00000518196 BEND3Q5T5X7 828 aa16.42■□□□□ 0.22
PABPC1-205ENST00000518196 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
PABPC1-205ENST00000518196 NBPF5PQ86XG9 351 aaPredicted RBP16.42■□□□□ 0.22
PABPC1-205ENST00000518196 DZIP1LQ8IYY4 767 aaKnown RBP16.42■□□□□ 0.22
PABPC1-205ENST00000518196 CLUAP1Q96AJ1 413 aa16.42■□□□□ 0.22
PABPC1-205ENST00000518196 NYXQ9GZU5 481 aa16.42■□□□□ 0.22
PABPC1-205ENST00000518196 CWC25Q9NXE8 425 aaPredicted RBP16.42■□□□□ 0.22
PABPC1-205ENST00000518196 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
PABPC1-205ENST00000518196 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
PABPC1-205ENST00000518196 NEURL1BA8MQ27 555 aa16.41■□□□□ 0.22
PABPC1-205ENST00000518196 POLRMTO00411 1230 aaKnown RBP16.41■□□□□ 0.22
PABPC1-205ENST00000518196 PLIN1O60240 522 aa16.41■□□□□ 0.22
PABPC1-205ENST00000518196 IGKV5-2P06315 115 aa16.41■□□□□ 0.22
PABPC1-205ENST00000518196 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
PABPC1-205ENST00000518196 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
PABPC1-205ENST00000518196 COL24A1Q17RW2 1714 aa16.41■□□□□ 0.22
PABPC1-205ENST00000518196 ABCC4O15439 1325 aa16.41■□□□□ 0.22
PABPC1-205ENST00000518196 UBN2Q6ZU65 1347 aa16.41■□□□□ 0.22
PABPC1-205ENST00000518196 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
PABPC1-205ENST00000518196 RRP1P56182 461 aaKnown RBP16.4■□□□□ 0.22
PABPC1-205ENST00000518196 DDR1Q08345 913 aa16.4■□□□□ 0.22
PABPC1-205ENST00000518196 CWF19L2Q2TBE0 894 aaKnown RBP16.4■□□□□ 0.22
PABPC1-205ENST00000518196 SUSD4Q5VX71 490 aa16.4■□□□□ 0.22
PABPC1-205ENST00000518196 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.21
PABPC1-205ENST00000518196 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
PABPC1-205ENST00000518196 TNNQ9UQP3 1299 aa16.39■□□□□ 0.21
PABPC1-205ENST00000518196 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms