RNA–Protein interactions for RNA: ENST00000517744.1

IGKV1-35-201, Transcript of immunoglobulin kappa variable 1-35 (pseudogene), humanhuman

BASIC

Gene IGKV1-35, Length 285 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-35-201ENST00000517744 NTSR2O95665 410 aa13.78□□□□□ -0.2
IGKV1-35-201ENST00000517744 CCT4P50991 539 aaKnown RBP13.78□□□□□ -0.2
IGKV1-35-201ENST00000517744 SUSD4Q5VX71 490 aa13.78□□□□□ -0.2
IGKV1-35-201ENST00000517744 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
IGKV1-35-201ENST00000517744 NBPF5PQ86XG9 351 aaPredicted RBP13.78□□□□□ -0.2
IGKV1-35-201ENST00000517744 UTP14AQ9BVJ6 771 aaKnown RBP13.78□□□□□ -0.2
IGKV1-35-201ENST00000517744 SRCIN1Q9C0H9 1055 aa13.78□□□□□ -0.2
IGKV1-35-201ENST00000517744 PCCAP05165 728 aaPredicted RBP13.77□□□□□ -0.21
IGKV1-35-201ENST00000517744 GCKRQ14397 625 aa13.77□□□□□ -0.21
IGKV1-35-201ENST00000517744 CWF19L2Q2TBE0 894 aaKnown RBP13.77□□□□□ -0.21
IGKV1-35-201ENST00000517744 SLC4A10Q6U841 1118 aa13.77□□□□□ -0.21
IGKV1-35-201ENST00000517744 DZIP1LQ8IYY4 767 aaKnown RBP13.77□□□□□ -0.21
IGKV1-35-201ENST00000517744 KIF13BQ9NQT8 1826 aa13.77□□□□□ -0.21
IGKV1-35-201ENST00000517744 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
IGKV1-35-201ENST00000517744 UTYO14607 1347 aa13.76□□□□□ -0.21
IGKV1-35-201ENST00000517744 PDE3AQ14432 1141 aa13.76□□□□□ -0.21
IGKV1-35-201ENST00000517744 SLC10A5Q5PT55 438 aa13.76□□□□□ -0.21
IGKV1-35-201ENST00000517744 PRR5LQ6MZQ0 368 aa13.76□□□□□ -0.21
IGKV1-35-201ENST00000517744 CNBD1Q8NA66 436 aa13.76□□□□□ -0.21
IGKV1-35-201ENST00000517744 ZBTB38Q8NAP3 1195 aaPredicted RBP13.76□□□□□ -0.21
IGKV1-35-201ENST00000517744 TRMT112Q9UI30 125 aaKnown RBP13.76□□□□□ -0.21
IGKV1-35-201ENST00000517744 SH3TC1Q8TE82 1336 aa13.75□□□□□ -0.21
IGKV1-35-201ENST00000517744 CDHR2Q9BYE9 1310 aa13.75□□□□□ -0.21
IGKV1-35-201ENST00000517744 H7C1W4 665 aa13.75□□□□□ -0.21
IGKV1-35-201ENST00000517744 RRP1P56182 461 aaKnown RBP13.75□□□□□ -0.21
IGKV1-35-201ENST00000517744 ST5P78524 1137 aa13.75□□□□□ -0.21
IGKV1-35-201ENST00000517744 TNNQ9UQP3 1299 aa13.75□□□□□ -0.21
IGKV1-35-201ENST00000517744 LAMB2P55268 1798 aa13.74□□□□□ -0.21
IGKV1-35-201ENST00000517744 KLRG2A4D1S0 409 aaPredicted RBP13.74□□□□□ -0.21
IGKV1-35-201ENST00000517744 GRM8O00222 908 aa13.74□□□□□ -0.21
IGKV1-35-201ENST00000517744 HSP90B1P14625 803 aaKnown RBP13.74□□□□□ -0.21
IGKV1-35-201ENST00000517744 FTSJ3Q8IY81 847 aaKnown RBP13.74□□□□□ -0.21
IGKV1-35-201ENST00000517744 BRIP1Q9BX63 1249 aa13.74□□□□□ -0.21
IGKV1-35-201ENST00000517744 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
IGKV1-35-201ENST00000517744 CD2APQ9Y5K6 639 aa13.74□□□□□ -0.21
IGKV1-35-201ENST00000517744 PLIN1O60240 522 aa13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 CENPBP07199 599 aaPredicted RBP13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 RLBP1P12271 317 aa13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 CASP7P55210 303 aa13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 ERFEQ4G0M1 354 aa13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 TMEM57Q8N5G2 664 aa13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 CLUAP1Q96AJ1 413 aa13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 FAM89AQ96GI7 184 aa13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
IGKV1-35-201ENST00000517744 ABCC12Q96J65 1359 aa13.72□□□□□ -0.21
IGKV1-35-201ENST00000517744 FAM177BA6PVY3 158 aa13.72□□□□□ -0.21
IGKV1-35-201ENST00000517744 NPHP1O15259 732 aa13.72□□□□□ -0.21
IGKV1-35-201ENST00000517744 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
IGKV1-35-201ENST00000517744 PLA2G12BQ9BX93 195 aa13.72□□□□□ -0.21
IGKV1-35-201ENST00000517744 C9orf78Q9NZ63 289 aaPredicted RBP13.72□□□□□ -0.21
IGKV1-35-201ENST00000517744 DDX60Q8IY21 1712 aaKnown RBP13.72□□□□□ -0.21
IGKV1-35-201ENST00000517744 IRS4O14654 1257 aaPredicted RBP13.71□□□□□ -0.21
IGKV1-35-201ENST00000517744 PDE6BP35913 854 aa13.71□□□□□ -0.21
IGKV1-35-201ENST00000517744 TGFB2P61812 414 aa13.71□□□□□ -0.21
IGKV1-35-201ENST00000517744 CRY2Q49AN0 593 aa13.71□□□□□ -0.21
IGKV1-35-201ENST00000517744 UBE3BQ7Z3V4 1068 aa13.71□□□□□ -0.21
IGKV1-35-201ENST00000517744 SYNE4Q8N205 404 aa13.71□□□□□ -0.21
IGKV1-35-201ENST00000517744 PANK1Q8TE04 598 aa13.71□□□□□ -0.21
IGKV1-35-201ENST00000517744 HDAC5Q9UQL6 1122 aa13.71□□□□□ -0.21
IGKV1-35-201ENST00000517744 KIAA1551Q9HCM1 1747 aa13.7□□□□□ -0.22
IGKV1-35-201ENST00000517744 TNRC6CQ9HCJ0 1690 aaKnown RBP13.7□□□□□ -0.22
IGKV1-35-201ENST00000517744 PDE8AO60658 829 aa13.7□□□□□ -0.22
IGKV1-35-201ENST00000517744 GNAI3P08754 354 aa13.7□□□□□ -0.22
IGKV1-35-201ENST00000517744 MVPQ14764 893 aaKnown RBP13.7□□□□□ -0.22
IGKV1-35-201ENST00000517744 ZBTB7BO15156 539 aaPredicted RBP13.69□□□□□ -0.22
IGKV1-35-201ENST00000517744 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
IGKV1-35-201ENST00000517744 SF3B3Q15393 1217 aaKnown RBP13.69□□□□□ -0.22
IGKV1-35-201ENST00000517744 C20orf194Q5TEA3 1177 aa13.69□□□□□ -0.22
IGKV1-35-201ENST00000517744 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
IGKV1-35-201ENST00000517744 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
IGKV1-35-201ENST00000517744 PPP1R1BQ9UD71 204 aaPredicted RBP13.69□□□□□ -0.22
IGKV1-35-201ENST00000517744 DDX19BQ9UMR2 479 aa13.69□□□□□ -0.22
IGKV1-35-201ENST00000517744 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
IGKV1-35-201ENST00000517744 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
IGKV1-35-201ENST00000517744 HCLS1P14317 486 aaPredicted RBP13.68□□□□□ -0.22
IGKV1-35-201ENST00000517744 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
IGKV1-35-201ENST00000517744 CCDC24Q8N4L8 307 aa13.68□□□□□ -0.22
IGKV1-35-201ENST00000517744 MYH3P11055 1940 aa13.68□□□□□ -0.22
IGKV1-35-201ENST00000517744 H0YIN7 160 aa13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 CSF1RP07333 972 aa13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 UBTFL1P0CB47 393 aaPredicted RBP13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 SRGNP10124 158 aa13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 HOXA10P31260 410 aaPredicted RBP13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 CTSWP56202 376 aa13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 FOXO4P98177 505 aa13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 RTL5Q5HYW3 569 aaPredicted RBP13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 JARID2Q92833 1246 aaPredicted RBP13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 MEIS3Q99687 375 aa13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 FHDC1Q9C0D6 1143 aaPredicted RBP13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 COG6Q9Y2V7 657 aa13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 RTL9Q8NET4 1388 aa13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
IGKV1-35-201ENST00000517744 NPR1P16066 1061 aa13.66□□□□□ -0.22
IGKV1-35-201ENST00000517744 KCNA3P22001 575 aa13.66□□□□□ -0.22
IGKV1-35-201ENST00000517744 RABL6Q3YEC7 729 aaPredicted RBP13.66□□□□□ -0.22
IGKV1-35-201ENST00000517744 STYK1Q6J9G0 422 aa13.66□□□□□ -0.22
IGKV1-35-201ENST00000517744 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
IGKV1-35-201ENST00000517744 KAZALD1Q96I82 304 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms