RNA–Protein interactions for RNA: ENST00000517647.1

TRIM55-205, Transcript of tripartite motif containing 55, humanhuman

TSL 2

Gene TRIM55, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-205ENST00000517647 ANXA1P04083 346 aa14.18□□□□□ -0.14
TRIM55-205ENST00000517647 NPR1P16066 1061 aa14.18□□□□□ -0.14
TRIM55-205ENST00000517647 FANCIQ9NVI1 1328 aa14.17□□□□□ -0.14
TRIM55-205ENST00000517647 ANKRD36CQ5JPF3 1778 aa14.17□□□□□ -0.14
TRIM55-205ENST00000517647 ARFGEF2Q9Y6D5 1785 aa14.17□□□□□ -0.14
TRIM55-205ENST00000517647 HOXA10P31260 410 aaPredicted RBP14.17□□□□□ -0.14
TRIM55-205ENST00000517647 SUSD4Q5VX71 490 aa14.17□□□□□ -0.14
TRIM55-205ENST00000517647 TSPYL6Q8N831 410 aa14.17□□□□□ -0.14
TRIM55-205ENST00000517647 ZNF784Q8NCA9 323 aaPredicted RBP14.17□□□□□ -0.14
TRIM55-205ENST00000517647 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
TRIM55-205ENST00000517647 MYH16Q9H6N6 1097 aa14.17□□□□□ -0.14
TRIM55-205ENST00000517647 LTBP3Q9NS15 1303 aa14.16□□□□□ -0.14
TRIM55-205ENST00000517647 ZC3H4Q9UPT8 1303 aaKnown RBP14.16□□□□□ -0.14
TRIM55-205ENST00000517647 COL11A2P13942 1736 aaPredicted RBP14.16□□□□□ -0.14
TRIM55-205ENST00000517647 NPHP1O15259 732 aa14.16□□□□□ -0.14
TRIM55-205ENST00000517647 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
TRIM55-205ENST00000517647 TWISTNBQ3B726 338 aaPredicted RBP14.16□□□□□ -0.14
TRIM55-205ENST00000517647 SOGA3Q5TF21 947 aa14.16□□□□□ -0.14
TRIM55-205ENST00000517647 NLRP10Q86W26 655 aa14.16□□□□□ -0.14
TRIM55-205ENST00000517647 C7orf43Q8WVR3 580 aa14.16□□□□□ -0.14
TRIM55-205ENST00000517647 NECTIN2Q92692 538 aa14.16□□□□□ -0.14
TRIM55-205ENST00000517647 TSR2Q969E8 191 aaKnown RBP14.16□□□□□ -0.14
TRIM55-205ENST00000517647 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
TRIM55-205ENST00000517647 VAMP4O75379 141 aa14.15□□□□□ -0.14
TRIM55-205ENST00000517647 ALDH1B1P30837 517 aa14.15□□□□□ -0.14
TRIM55-205ENST00000517647 AIMP1Q12904 312 aaKnown RBP14.15□□□□□ -0.14
TRIM55-205ENST00000517647 UTP14AQ9BVJ6 771 aaKnown RBP14.15□□□□□ -0.14
TRIM55-205ENST00000517647 ELL2O00472 640 aaPredicted RBP14.14□□□□□ -0.15
TRIM55-205ENST00000517647 GPTP24298 496 aa14.14□□□□□ -0.15
TRIM55-205ENST00000517647 GTF2E1P29083 439 aaPredicted RBP14.14□□□□□ -0.15
TRIM55-205ENST00000517647 ARHGAP27Q6ZUM4 889 aa14.14□□□□□ -0.15
TRIM55-205ENST00000517647 ZBTB12Q9Y330 459 aaPredicted RBP14.14□□□□□ -0.15
TRIM55-205ENST00000517647 SBF1O95248 1867 aa14.13□□□□□ -0.15
TRIM55-205ENST00000517647 DDX58O95786 925 aaKnown RBP14.13□□□□□ -0.15
TRIM55-205ENST00000517647 ERFEQ4G0M1 354 aa14.13□□□□□ -0.15
TRIM55-205ENST00000517647 GRIPAP1Q4V328 841 aa14.13□□□□□ -0.15
TRIM55-205ENST00000517647 ZNF622Q969S3 477 aaKnown RBP eCLIP14.13□□□□□ -0.15
TRIM55-205ENST00000517647 CRAMP1Q96RY5 1269 aa14.13□□□□□ -0.15
TRIM55-205ENST00000517647 STK31Q9BXU1 1019 aa14.13□□□□□ -0.15
TRIM55-205ENST00000517647 SH3TC1Q8TE82 1336 aa14.13□□□□□ -0.15
TRIM55-205ENST00000517647 FER1L6Q2WGJ9 1857 aa14.12□□□□□ -0.15
TRIM55-205ENST00000517647 CC2D2BQ6DHV5 1058 aa14.12□□□□□ -0.15
TRIM55-205ENST00000517647 PRPF40BQ6NWY9 871 aaKnown RBP14.12□□□□□ -0.15
TRIM55-205ENST00000517647 NUTM1Q86Y26 1132 aa14.12□□□□□ -0.15
TRIM55-205ENST00000517647 CCDC24Q8N4L8 307 aa14.12□□□□□ -0.15
TRIM55-205ENST00000517647 CCDC191Q8NCU4 936 aa14.12□□□□□ -0.15
TRIM55-205ENST00000517647 NLRP3Q96P20 1036 aa14.12□□□□□ -0.15
TRIM55-205ENST00000517647 PHAXQ9H814 394 aaKnown RBP14.12□□□□□ -0.15
TRIM55-205ENST00000517647 WWC3Q9ULE0 1092 aa14.12□□□□□ -0.15
TRIM55-205ENST00000517647 SLX4Q8IY92 1834 aa14.12□□□□□ -0.15
TRIM55-205ENST00000517647 E9PSI1 815 aa14.11□□□□□ -0.15
TRIM55-205ENST00000517647 NFKBIEO00221 500 aa14.11□□□□□ -0.15
TRIM55-205ENST00000517647 KSR2Q6VAB6 950 aa14.11□□□□□ -0.15
TRIM55-205ENST00000517647 SNED1Q8TER0 1413 aa14.11□□□□□ -0.15
TRIM55-205ENST00000517647 ZNF428Q96B54 188 aa14.11□□□□□ -0.15
TRIM55-205ENST00000517647 METTL22Q9BUU2 404 aaPredicted RBP14.11□□□□□ -0.15
TRIM55-205ENST00000517647 TNRC6CQ9HCJ0 1690 aaKnown RBP14.1□□□□□ -0.15
TRIM55-205ENST00000517647 HSP90B1P14625 803 aaKnown RBP14.1□□□□□ -0.15
TRIM55-205ENST00000517647 LMNB1P20700 586 aa14.1□□□□□ -0.15
TRIM55-205ENST00000517647 EXOSC9Q06265 439 aaKnown RBP14.1□□□□□ -0.15
TRIM55-205ENST00000517647 RIC3Q7Z5B4 369 aa14.1□□□□□ -0.15
TRIM55-205ENST00000517647 TRMT2AQ8IZ69 625 aaKnown RBP14.1□□□□□ -0.15
TRIM55-205ENST00000517647 TRMT112Q9UI30 125 aaKnown RBP14.1□□□□□ -0.15
TRIM55-205ENST00000517647 FAM177BA6PVY3 158 aa14.09□□□□□ -0.15
TRIM55-205ENST00000517647 SF3B3Q15393 1217 aaKnown RBP14.09□□□□□ -0.15
TRIM55-205ENST00000517647 C9orf131Q5VYM1 1079 aa14.09□□□□□ -0.15
TRIM55-205ENST00000517647 RTKN2Q8IZC4 609 aa14.09□□□□□ -0.15
TRIM55-205ENST00000517647 ZBTB38Q8NAP3 1195 aaPredicted RBP14.09□□□□□ -0.15
TRIM55-205ENST00000517647 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
TRIM55-205ENST00000517647 C21orf2O43822 256 aa14.08□□□□□ -0.16
TRIM55-205ENST00000517647 PCCAP05165 728 aaPredicted RBP14.08□□□□□ -0.16
TRIM55-205ENST00000517647 SLFN5Q08AF3 891 aa14.08□□□□□ -0.16
TRIM55-205ENST00000517647 CCDC93Q567U6 631 aa14.08□□□□□ -0.16
TRIM55-205ENST00000517647 RBM17Q96I25 401 aaKnown RBP14.08□□□□□ -0.16
TRIM55-205ENST00000517647 SALL2Q9Y467 1007 aaPredicted RBP14.08□□□□□ -0.16
TRIM55-205ENST00000517647 PI4KAP2A4QPH2 592 aa14.07□□□□□ -0.16
TRIM55-205ENST00000517647 BBOX1O75936 387 aa14.07□□□□□ -0.16
TRIM55-205ENST00000517647 CT47B1P0C2W7 299 aaPredicted RBP14.07□□□□□ -0.16
TRIM55-205ENST00000517647 FLIIQ13045 1269 aa14.07□□□□□ -0.16
TRIM55-205ENST00000517647 TMC4Q7Z404 712 aa14.07□□□□□ -0.16
TRIM55-205ENST00000517647 PI4KAP1Q8N8J0 262 aa14.07□□□□□ -0.16
TRIM55-205ENST00000517647 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
TRIM55-205ENST00000517647 PSMD1Q99460 953 aa14.07□□□□□ -0.16
TRIM55-205ENST00000517647 TAOK3Q9H2K8 898 aa14.07□□□□□ -0.16
TRIM55-205ENST00000517647 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
TRIM55-205ENST00000517647 DICER1Q9UPY3 1922 aaKnown RBP14.07□□□□□ -0.16
TRIM55-205ENST00000517647 PRELPP51888 382 aa14.06□□□□□ -0.16
TRIM55-205ENST00000517647 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM55-205ENST00000517647 VPS33BQ9H267 617 aa14.06□□□□□ -0.16
TRIM55-205ENST00000517647 CWC25Q9NXE8 425 aaPredicted RBP14.06□□□□□ -0.16
TRIM55-205ENST00000517647 RNF181Q9P0P0 153 aa14.06□□□□□ -0.16
TRIM55-205ENST00000517647 MAP3K2Q9Y2U5 619 aa14.06□□□□□ -0.16
TRIM55-205ENST00000517647 CDHR2Q9BYE9 1310 aa14.06□□□□□ -0.16
TRIM55-205ENST00000517647 LAMB2P55268 1798 aa14.06□□□□□ -0.16
TRIM55-205ENST00000517647 SENP3-EIF4A1A0A087X0R7 540 aa14.05□□□□□ -0.16
TRIM55-205ENST00000517647 ATP5J2-PTCD1G3V325 749 aa14.05□□□□□ -0.16
TRIM55-205ENST00000517647 IGKV5-2P06315 115 aa14.05□□□□□ -0.16
TRIM55-205ENST00000517647 NEFLP07196 543 aa14.05□□□□□ -0.16
TRIM55-205ENST00000517647 RASSF7Q02833 373 aa14.05□□□□□ -0.16
TRIM55-205ENST00000517647 NEXNQ0ZGT2 675 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms