RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 GOLGA6L4A6NEF3 574 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 HTATSF1O43719 755 aaKnown RBP14.67□□□□□ -0.06
PCM1-203ENST00000517545 ZKSCAN1P17029 563 aaPredicted RBP14.67□□□□□ -0.06
PCM1-203ENST00000517545 BEND3Q5T5X7 828 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 FEZ1Q99689 392 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 STK3Q13188 491 aa14.66□□□□□ -0.06
PCM1-203ENST00000517545 LTV1Q96GA3 475 aaPredicted RBP14.66□□□□□ -0.06
PCM1-203ENST00000517545 OGFRQ9NZT2 677 aa14.66□□□□□ -0.06
PCM1-203ENST00000517545 NALCNQ8IZF0 1738 aa14.66□□□□□ -0.06
PCM1-203ENST00000517545 ARID5BQ14865 1188 aa14.66□□□□□ -0.06
PCM1-203ENST00000517545 CLASRPQ8N2M8 674 aaKnown RBP14.66□□□□□ -0.06
PCM1-203ENST00000517545 LEO1Q8WVC0 666 aaPredicted RBP14.66□□□□□ -0.06
PCM1-203ENST00000517545 ZNF592Q92610 1267 aa14.66□□□□□ -0.06
PCM1-203ENST00000517545 ECHDC1Q9NTX5 307 aa14.66□□□□□ -0.06
PCM1-203ENST00000517545 CHPF2Q9P2E5 772 aa14.66□□□□□ -0.06
PCM1-203ENST00000517545 ZNF165P49910 485 aa14.66□□□□□ -0.06
PCM1-203ENST00000517545 TPD52L1Q16890 204 aaPredicted RBP14.66□□□□□ -0.06
PCM1-203ENST00000517545 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
PCM1-203ENST00000517545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.66□□□□□ -0.06
PCM1-203ENST00000517545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.65□□□□□ -0.06
PCM1-203ENST00000517545 TDRD7Q8NHU6 1098 aaKnown RBP14.65□□□□□ -0.06
PCM1-203ENST00000517545 PGBD1Q96JS3 809 aa14.65□□□□□ -0.06
PCM1-203ENST00000517545 CLSTN2Q9H4D0 955 aa14.65□□□□□ -0.06
PCM1-203ENST00000517545 SLC27A2O14975 620 aa14.65□□□□□ -0.06
PCM1-203ENST00000517545 USHBP1Q8N6Y0 703 aa14.65□□□□□ -0.06
PCM1-203ENST00000517545 CCDC112Q8NEF3 446 aa14.65□□□□□ -0.06
PCM1-203ENST00000517545 DNAAF4Q8WXU2 420 aa14.65□□□□□ -0.06
PCM1-203ENST00000517545 USP27XA6NNY8 438 aa14.64□□□□□ -0.07
PCM1-203ENST00000517545 NMIQ13287 307 aaPredicted RBP14.64□□□□□ -0.07
PCM1-203ENST00000517545 NUTM2GQ5VZR2 741 aa14.64□□□□□ -0.07
PCM1-203ENST00000517545 RBM43Q6ZSC3 357 aaKnown RBP14.64□□□□□ -0.07
PCM1-203ENST00000517545 BICD2Q8TD16 824 aa14.64□□□□□ -0.07
PCM1-203ENST00000517545 SCAND2PQ9GZW5 306 aaPredicted RBP14.64□□□□□ -0.07
PCM1-203ENST00000517545 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
PCM1-203ENST00000517545 LRRC37A3O60309 1634 aa14.64□□□□□ -0.07
PCM1-203ENST00000517545 CRYBG1Q9Y4K1 1723 aa14.64□□□□□ -0.07
PCM1-203ENST00000517545 IFIT2P09913 472 aaKnown RBP14.64□□□□□ -0.07
PCM1-203ENST00000517545 HSP90AB4PQ58FF6 505 aa14.64□□□□□ -0.07
PCM1-203ENST00000517545 ZNF771Q7L3S4 317 aaPredicted RBP14.64□□□□□ -0.07
PCM1-203ENST00000517545 MAP4K1Q92918 833 aa14.64□□□□□ -0.07
PCM1-203ENST00000517545 DDX19AQ9NUU7 478 aaKnown RBP14.64□□□□□ -0.07
PCM1-203ENST00000517545 NPHP3Q7Z494 1330 aa14.64□□□□□ -0.07
PCM1-203ENST00000517545 AACSQ86V21 672 aa14.63□□□□□ -0.07
PCM1-203ENST00000517545 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCM1-203ENST00000517545 V9GYY5 206 aaPredicted RBP14.63□□□□□ -0.07
PCM1-203ENST00000517545 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.63□□□□□ -0.07
PCM1-203ENST00000517545 KCNQ3O43525 872 aa14.63□□□□□ -0.07
PCM1-203ENST00000517545 PDCP20941 246 aa14.63□□□□□ -0.07
PCM1-203ENST00000517545 TOB2Q14106 344 aaPredicted RBP14.63□□□□□ -0.07
PCM1-203ENST00000517545 DDX11Q96FC9 970 aa14.63□□□□□ -0.07
PCM1-203ENST00000517545 DDX41Q9UJV9 622 aaKnown RBP14.63□□□□□ -0.07
PCM1-203ENST00000517545 A0A0D9SFI3 127 aa14.63□□□□□ -0.07
PCM1-203ENST00000517545 JAK2O60674 1132 aa14.63□□□□□ -0.07
PCM1-203ENST00000517545 CEBPAP49715 358 aaPredicted RBP14.63□□□□□ -0.07
PCM1-203ENST00000517545 EVI5LQ96CN4 794 aa14.63□□□□□ -0.07
PCM1-203ENST00000517545 SYCP1Q15431 976 aa14.62□□□□□ -0.07
PCM1-203ENST00000517545 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
PCM1-203ENST00000517545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.62□□□□□ -0.07
PCM1-203ENST00000517545 PAXBP1Q9Y5B6 917 aa14.62□□□□□ -0.07
PCM1-203ENST00000517545 FMN2Q9NZ56 1722 aa14.62□□□□□ -0.07
PCM1-203ENST00000517545 N4BP2Q86UW6 1770 aaPredicted RBP14.62□□□□□ -0.07
PCM1-203ENST00000517545 A0A087WWV3 80 aa14.62□□□□□ -0.07
PCM1-203ENST00000517545 CEP135Q66GS9 1140 aa14.62□□□□□ -0.07
PCM1-203ENST00000517545 C11orf57Q6ZUT1 292 aaPredicted RBP14.61□□□□□ -0.07
PCM1-203ENST00000517545 CCDC8Q9H0W5 538 aaPredicted RBP14.61□□□□□ -0.07
PCM1-203ENST00000517545 CGNQ9P2M7 1197 aaKnown RBP14.61□□□□□ -0.07
PCM1-203ENST00000517545 CACNA1FO60840 1977 aa14.61□□□□□ -0.07
PCM1-203ENST00000517545 CEBPZQ03701 1054 aaKnown RBP14.61□□□□□ -0.07
PCM1-203ENST00000517545 LRRC8AQ8IWT6 810 aa14.61□□□□□ -0.07
PCM1-203ENST00000517545 NGDNQ8NEJ9 315 aaKnown RBP14.61□□□□□ -0.07
PCM1-203ENST00000517545 TLR7Q9NYK1 1049 aaKnown RBP14.61□□□□□ -0.07
PCM1-203ENST00000517545 ADCY9O60503 1353 aa14.61□□□□□ -0.07
PCM1-203ENST00000517545 RPS6KB1P23443 525 aa14.6□□□□□ -0.07
PCM1-203ENST00000517545 PSMA5P28066 241 aa14.6□□□□□ -0.07
PCM1-203ENST00000517545 HOXC9P31274 260 aa14.6□□□□□ -0.07
PCM1-203ENST00000517545 EIF4A1P60842 406 aaKnown RBP14.6□□□□□ -0.07
PCM1-203ENST00000517545 KIF18AQ8NI77 898 aa14.6□□□□□ -0.07
PCM1-203ENST00000517545 GPATCH3Q96I76 525 aa14.6□□□□□ -0.07
PCM1-203ENST00000517545 LGR6Q9HBX8 967 aa14.6□□□□□ -0.07
PCM1-203ENST00000517545 ZNF215Q9UL58 517 aaPredicted RBP14.6□□□□□ -0.07
PCM1-203ENST00000517545 NLRP6P59044 892 aa14.6□□□□□ -0.07
PCM1-203ENST00000517545 ZNF589Q86UQ0 364 aaPredicted RBP14.6□□□□□ -0.07
PCM1-203ENST00000517545 EAF2Q96CJ1 260 aaPredicted RBP14.6□□□□□ -0.07
PCM1-203ENST00000517545 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
PCM1-203ENST00000517545 TOPAZ1Q8N9V7 1692 aa14.6□□□□□ -0.07
PCM1-203ENST00000517545 IQCB1Q15051 598 aa14.59□□□□□ -0.07
PCM1-203ENST00000517545 KMT5BQ4FZB7 885 aa14.59□□□□□ -0.07
PCM1-203ENST00000517545 TRMT1Q9NXH9 659 aaKnown RBP14.59□□□□□ -0.07
PCM1-203ENST00000517545 USP16Q9Y5T5 823 aa14.59□□□□□ -0.07
PCM1-203ENST00000517545 NPHP4O75161 1426 aaPredicted RBP14.59□□□□□ -0.07
PCM1-203ENST00000517545 SLFN14P0C7P3 912 aa14.59□□□□□ -0.07
PCM1-203ENST00000517545 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
PCM1-203ENST00000517545 MTX1Q13505 466 aa14.59□□□□□ -0.07
PCM1-203ENST00000517545 CWF19L2Q2TBE0 894 aaKnown RBP14.59□□□□□ -0.07
PCM1-203ENST00000517545 BRF1Q92994 677 aa14.59□□□□□ -0.07
PCM1-203ENST00000517545 BABAM1Q9NWV8 329 aa14.59□□□□□ -0.07
PCM1-203ENST00000517545 MORC2Q9Y6X9 1032 aaPredicted RBP14.59□□□□□ -0.07
PCM1-203ENST00000517545 SASH1O94885 1247 aa14.58□□□□□ -0.08
PCM1-203ENST00000517545 FTOQ9C0B1 505 aaKnown RBP eCLIP14.58□□□□□ -0.08
PCM1-203ENST00000517545 RESTQ13127 1097 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms