RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CLSTN2Q9H4D0 955 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 SETBP1Q9Y6X0 1596 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 KIAA1210Q9ULL0 1709 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 SETQ01105 290 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-203ENST00000517490 SYCP1Q15431 976 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 CBX8Q9HC52 389 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 ZRANB1Q9UGI0 708 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 STAP2Q9UGK3 403 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 DACH1Q9UI36 760 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 CCDC69A6NI79 296 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 URI1O94763 535 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-203ENST00000517490 TM6SF1Q9BZW5 370 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 BOLA2Q9H3K6 86 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 IGSF3O75054 1194 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 HSP90AB2PQ58FF8 381 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 TMC6Q7Z403 805 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 TTC5Q8N0Z6 440 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 CREB3L3Q68CJ9 461 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 NEK1Q96PY6 1258 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 SRRTQ9BXP5 876 aaKnown RBP7.77□□□□□ -1.17
CPNE3-203ENST00000517490 GOLGA6L9A6NEM1 432 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 BTBD11A6QL63 1104 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 CFAP100Q494V2 611 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 TXLNBQ8N3L3 684 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 PYCARDQ9ULZ3 195 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 MTHFSDQ2M296 383 aaKnown RBP7.77□□□□□ -1.17
CPNE3-203ENST00000517490 FBXO31Q5XUX0 539 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-203ENST00000517490 ABTB2Q8N961 1025 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 SPTLC3Q9NUV7 552 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 ASXL2Q76L83 1435 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 CEP152O94986 1710 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 PNMA6EA0A0J9YXQ4 647 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 NUTM2GQ5VZR2 741 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 ZSCAN25Q6NSZ9 544 aa7.77□□□□□ -1.17
CPNE3-203ENST00000517490 ZNF530Q6P9A1 599 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-203ENST00000517490 CCDC8Q9H0W5 538 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-203ENST00000517490 DBF4Q9UBU7 674 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-203ENST00000517490 CPSF1Q10570 1443 aaKnown RBP7.76□□□□□ -1.17
CPNE3-203ENST00000517490 AATKQ6ZMQ8 1374 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 EFCAB6Q5THR3 1501 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 IPO7O95373 1038 aaKnown RBP7.76□□□□□ -1.17
CPNE3-203ENST00000517490 CSB-PGBD3P0DP91 1061 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 GTF2F1P35269 517 aaKnown RBP eCLIP7.76□□□□□ -1.17
CPNE3-203ENST00000517490 WASHC4Q2M389 1173 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 CTNNA3Q9UI47 895 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 MTMR6Q9Y217 621 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 PI4KAP2A4QPH2 592 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 SLC3A2P08195 630 aaKnown RBP7.76□□□□□ -1.17
CPNE3-203ENST00000517490 CASQ1P31415 396 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 FILIP1LQ4L180 1135 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 NFXL1Q6ZNB6 911 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 FAM177A1Q8N128 213 aaPredicted RBP7.76□□□□□ -1.17
CPNE3-203ENST00000517490 PLCD3Q8N3E9 789 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 PI4KAP1Q8N8J0 262 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 SMARCE1Q969G3 411 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 TOP1P11387 765 aaKnown RBP7.76□□□□□ -1.17
CPNE3-203ENST00000517490 CPA1P15085 419 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 AKAP17AQ02040 695 aaKnown RBP7.76□□□□□ -1.17
CPNE3-203ENST00000517490 ATL3Q6DD88 541 aa7.76□□□□□ -1.17
CPNE3-203ENST00000517490 POLR3GO15318 223 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-203ENST00000517490 FAM193AP78312 1265 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 BRF1Q92994 677 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 BABAM1Q9NWV8 329 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.75□□□□□ -1.17
CPNE3-203ENST00000517490 V9GYY5 206 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-203ENST00000517490 ACEP12821 1306 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 PNPLA6Q8IY17 1366 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 ALDH1L1O75891 902 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 PPFIBP1Q86W92 1011 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 LEO1Q8WVC0 666 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-203ENST00000517490 GBP3Q9H0R5 595 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 TOMM22Q9NS69 142 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 NMIQ13287 307 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-203ENST00000517490 AOPEPQ8N6M6 819 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 MRPS27Q92552 414 aaKnown RBP7.75□□□□□ -1.17
CPNE3-203ENST00000517490 VIRMAQ69YN4 1812 aaKnown RBP7.75□□□□□ -1.17
CPNE3-203ENST00000517490 CDKL5O76039 1030 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 TTC21AQ8NDW8 1320 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 QRICH2Q9H0J4 1663 aa7.75□□□□□ -1.17
CPNE3-203ENST00000517490 POTEB2H3BUK9 544 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 APPP05067 770 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 SSH3Q8TE77 659 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 C8orf76Q96K31 380 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 ELP1O95163 1332 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 ATP7BP35670 1465 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 LARP1Q6PKG0 1096 aaKnown RBP7.74□□□□□ -1.17
CPNE3-203ENST00000517490 TCEANC2Q96MN5 208 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 PES1O00541 588 aaKnown RBP7.74□□□□□ -1.17
CPNE3-203ENST00000517490 RPS6KB1P23443 525 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 PIAS4Q8N2W9 510 aaPredicted RBP7.74□□□□□ -1.17
CPNE3-203ENST00000517490 KRI1Q8N9T8 703 aaKnown RBP7.74□□□□□ -1.17
CPNE3-203ENST00000517490 HYPKQ9NX55 129 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 FLT4P35916 1363 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 FOXO3O43524 673 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 JAKMIP3Q5VZ66 844 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 RASSF8Q8NHQ8 419 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 TDRD7Q8NHU6 1098 aaKnown RBP7.74□□□□□ -1.17
CPNE3-203ENST00000517490 KCNG4Q8TDN1 519 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 IMPACTQ9P2X3 320 aa7.74□□□□□ -1.17
CPNE3-203ENST00000517490 DNAI1Q9UI46 699 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms