RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SYNE4Q8N205 404 aa11.46□□□□□ -0.57
PABPC1-202ENST00000517403 RBM46Q8TBY0 533 aaKnown RBP11.46□□□□□ -0.57
PABPC1-202ENST00000517403 MYBBP1AQ9BQG0 1328 aaKnown RBP11.45□□□□□ -0.58
PABPC1-202ENST00000517403 DDNO94850 711 aaPredicted RBP11.45□□□□□ -0.58
PABPC1-202ENST00000517403 PDE6BP35913 854 aa11.45□□□□□ -0.58
PABPC1-202ENST00000517403 CRY2Q49AN0 593 aa11.45□□□□□ -0.58
PABPC1-202ENST00000517403 CLEC4GQ6UXB4 293 aa11.45□□□□□ -0.58
PABPC1-202ENST00000517403 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
PABPC1-202ENST00000517403 RIPK4P57078 832 aa11.44□□□□□ -0.58
PABPC1-202ENST00000517403 ZNF34Q8IZ26 560 aa11.44□□□□□ -0.58
PABPC1-202ENST00000517403 MASTLQ96GX5 879 aa11.44□□□□□ -0.58
PABPC1-202ENST00000517403 ZNF277Q9NRM2 450 aaPredicted RBP11.44□□□□□ -0.58
PABPC1-202ENST00000517403 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
PABPC1-202ENST00000517403 KDM2BQ8NHM5 1336 aa11.43□□□□□ -0.58
PABPC1-202ENST00000517403 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
PABPC1-202ENST00000517403 ST5P78524 1137 aa11.43□□□□□ -0.58
PABPC1-202ENST00000517403 TAOK3Q9H2K8 898 aa11.43□□□□□ -0.58
PABPC1-202ENST00000517403 TSPYL4Q9UJ04 414 aa11.43□□□□□ -0.58
PABPC1-202ENST00000517403 ADAMTS8Q9UP79 889 aa11.43□□□□□ -0.58
PABPC1-202ENST00000517403 SCN4AP35499 1836 aa11.42□□□□□ -0.58
PABPC1-202ENST00000517403 MAPK8IP3Q9UPT6 1336 aa11.42□□□□□ -0.58
PABPC1-202ENST00000517403 NPR1P16066 1061 aa11.42□□□□□ -0.58
PABPC1-202ENST00000517403 APLP1P51693 650 aa11.42□□□□□ -0.58
PABPC1-202ENST00000517403 RALBP1Q15311 655 aa11.42□□□□□ -0.58
PABPC1-202ENST00000517403 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
PABPC1-202ENST00000517403 SPRYD3Q8NCJ5 442 aa11.42□□□□□ -0.58
PABPC1-202ENST00000517403 ERVV-1B6SEH8 477 aa11.41□□□□□ -0.58
PABPC1-202ENST00000517403 CHL1O00533 1208 aa11.41□□□□□ -0.58
PABPC1-202ENST00000517403 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
PABPC1-202ENST00000517403 GIGYF2Q6Y7W6 1299 aaKnown RBP11.41□□□□□ -0.58
PABPC1-202ENST00000517403 PLCD3Q8N3E9 789 aa11.41□□□□□ -0.58
PABPC1-202ENST00000517403 CNKSR1Q969H4 720 aa11.41□□□□□ -0.58
PABPC1-202ENST00000517403 PRKRIP1Q9H875 184 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-202ENST00000517403 ABCB7O75027 752 aa11.4□□□□□ -0.58
PABPC1-202ENST00000517403 FKBP4Q02790 459 aaKnown RBP eCLIP11.4□□□□□ -0.58
PABPC1-202ENST00000517403 PNISRQ8TF01 805 aaKnown RBP11.4□□□□□ -0.58
PABPC1-202ENST00000517403 XAGE3Q8WTP9 111 aa11.4□□□□□ -0.58
PABPC1-202ENST00000517403 ZNF652Q9Y2D9 606 aa11.4□□□□□ -0.58
PABPC1-202ENST00000517403 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-202ENST00000517403 FMR1Q06787 632 aaKnown RBP eCLIP11.39□□□□□ -0.597e-17■■■■■ 61.9
PABPC1-202ENST00000517403 FSTL1Q12841 308 aa11.39□□□□□ -0.59
PABPC1-202ENST00000517403 CCDC93Q567U6 631 aa11.39□□□□□ -0.59
PABPC1-202ENST00000517403 KLRG1Q96E93 195 aa11.39□□□□□ -0.59
PABPC1-202ENST00000517403 CHPF2Q9P2E5 772 aa11.39□□□□□ -0.59
PABPC1-202ENST00000517403 ABCC4O15439 1325 aa11.38□□□□□ -0.59
PABPC1-202ENST00000517403 ERBB4Q15303 1308 aa11.38□□□□□ -0.59
PABPC1-202ENST00000517403 NPHP1O15259 732 aa11.38□□□□□ -0.59
PABPC1-202ENST00000517403 VEGFAP15692 232 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-202ENST00000517403 HOXA10P31260 410 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-202ENST00000517403 TPTE2Q6XPS3 522 aa11.38□□□□□ -0.59
PABPC1-202ENST00000517403 COPS6Q7L5N1 327 aa11.38□□□□□ -0.59
PABPC1-202ENST00000517403 JMYQ8N9B5 988 aa11.38□□□□□ -0.59
PABPC1-202ENST00000517403 SMC1BQ8NDV3 1235 aa11.38□□□□□ -0.59
PABPC1-202ENST00000517403 L3MBTL3Q96JM7 780 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-202ENST00000517403 MBIPQ9NS73 344 aa11.38□□□□□ -0.59
PABPC1-202ENST00000517403 RNF123Q5XPI4 1314 aa11.37□□□□□ -0.59
PABPC1-202ENST00000517403 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
PABPC1-202ENST00000517403 ZNF853P0CG23 659 aa11.37□□□□□ -0.59
PABPC1-202ENST00000517403 AIMP1Q12904 312 aaKnown RBP11.37□□□□□ -0.59
PABPC1-202ENST00000517403 KIF6Q6ZMV9 814 aa11.37□□□□□ -0.59
PABPC1-202ENST00000517403 NLRP10Q86W26 655 aa11.37□□□□□ -0.59
PABPC1-202ENST00000517403 RUNDC1Q96C34 613 aa11.37□□□□□ -0.59
PABPC1-202ENST00000517403 TAF1DQ9H5J8 278 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-202ENST00000517403 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
PABPC1-202ENST00000517403 PCNTO95613 3336 aa11.37□□□□□ -0.59
PABPC1-202ENST00000517403 PASKQ96RG2 1323 aa11.36□□□□□ -0.59
PABPC1-202ENST00000517403 SCN9AQ15858 1988 aa11.36□□□□□ -0.59
PABPC1-202ENST00000517403 THSD7BQ9C0I4 1608 aa11.36□□□□□ -0.59
PABPC1-202ENST00000517403 FZD9O00144 591 aa11.36□□□□□ -0.59
PABPC1-202ENST00000517403 HCLS1P14317 486 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-202ENST00000517403 IARSP41252 1262 aaKnown RBP11.36□□□□□ -0.59
PABPC1-202ENST00000517403 C16orf71Q8IYS4 520 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-202ENST00000517403 SPEF2Q9C093 1822 aa11.36□□□□□ -0.59
PABPC1-202ENST00000517403 SHTN1A0MZ66 631 aa11.35□□□□□ -0.59
PABPC1-202ENST00000517403 SCNN1DP51172 638 aa11.35□□□□□ -0.59
PABPC1-202ENST00000517403 COL13A1Q5TAT6 717 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-202ENST00000517403 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
PABPC1-202ENST00000517403 NPM2Q86SE8 214 aaKnown RBP11.35□□□□□ -0.59
PABPC1-202ENST00000517403 DDX21Q9NR30 783 aaKnown RBP eCLIP11.35□□□□□ -0.59
PABPC1-202ENST00000517403 LAS1LQ9Y4W2 734 aaKnown RBP11.35□□□□□ -0.59
PABPC1-202ENST00000517403 APAF1O14727 1248 aa11.34□□□□□ -0.59
PABPC1-202ENST00000517403 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-202ENST00000517403 ITGBL1O95965 494 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-202ENST00000517403 TSPYL6Q8N831 410 aa11.34□□□□□ -0.59
PABPC1-202ENST00000517403 C8orf58Q8NAV2 365 aa11.34□□□□□ -0.59
PABPC1-202ENST00000517403 PSMD1Q99460 953 aa11.34□□□□□ -0.59
PABPC1-202ENST00000517403 PHAXQ9H814 394 aaKnown RBP11.34□□□□□ -0.59
PABPC1-202ENST00000517403 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-202ENST00000517403 ATP5J2-PTCD1G3V325 749 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 NEFMP07197 916 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 TCIRG1Q13488 830 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 AOC3Q16853 763 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 SLC10A5Q5PT55 438 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 DUSP27Q5VZP5 1158 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 MIER1Q8N108 512 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 CRAMP1Q96RY5 1269 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 ISCA1Q9BUE6 129 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
PABPC1-202ENST00000517403 BABAM1Q9NWV8 329 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms