RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
CHMP7-203ENST00000517325 PTCD1O75127 700 aaKnown RBP20.18■□□□□ 0.82
CHMP7-203ENST00000517325 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
CHMP7-203ENST00000517325 PTH1RQ03431 593 aa20.18■□□□□ 0.82
CHMP7-203ENST00000517325 FOXD4L5Q5VV16 416 aaPredicted RBP20.18■□□□□ 0.82
CHMP7-203ENST00000517325 UBE3BQ7Z3V4 1068 aa20.18■□□□□ 0.82
CHMP7-203ENST00000517325 RUFY2Q8WXA3 655 aa20.18■□□□□ 0.82
CHMP7-203ENST00000517325 FOXD4L4Q8WXT5 416 aaPredicted RBP20.18■□□□□ 0.82
CHMP7-203ENST00000517325 SLAIN2Q9P270 581 aa20.18■□□□□ 0.82
CHMP7-203ENST00000517325 AFDNP55196 1824 aaKnown RBP20.17■□□□□ 0.82
CHMP7-203ENST00000517325 STRCQ7RTU9 1775 aa20.17■□□□□ 0.82
CHMP7-203ENST00000517325 ZNF335Q9H4Z2 1342 aaPredicted RBP20.16■□□□□ 0.82
CHMP7-203ENST00000517325 NBPF26B4DH59 902 aa20.16■□□□□ 0.82
CHMP7-203ENST00000517325 RFX5P48382 616 aaPredicted RBP20.16■□□□□ 0.82
CHMP7-203ENST00000517325 NBPF14Q5TI25 921 aa20.16■□□□□ 0.82
CHMP7-203ENST00000517325 NBPF10Q6P3W6 841 aaKnown RBP20.16■□□□□ 0.82
CHMP7-203ENST00000517325 NBPF15Q8N660 670 aa20.16■□□□□ 0.82
CHMP7-203ENST00000517325 TTC14Q96N46 770 aa20.16■□□□□ 0.82
CHMP7-203ENST00000517325 PLBD2Q8NHP8 589 aa20.16■□□□□ 0.82
CHMP7-203ENST00000517325 BRD1O95696 1058 aa20.15■□□□□ 0.82
CHMP7-203ENST00000517325 COPRSQ9NQ92 184 aa20.15■□□□□ 0.82
CHMP7-203ENST00000517325 A0A087WZG4 1122 aa20.15■□□□□ 0.82
CHMP7-203ENST00000517325 PTPN12Q05209 780 aaKnown RBP20.15■□□□□ 0.82
CHMP7-203ENST00000517325 BOLA2Q9H3K6 86 aa20.15■□□□□ 0.82
CHMP7-203ENST00000517325 RABL6Q3YEC7 729 aaPredicted RBP20.14■□□□□ 0.82
CHMP7-203ENST00000517325 FAM227BQ96M60 508 aa20.14■□□□□ 0.82
CHMP7-203ENST00000517325 PRPF40AO75400 957 aaKnown RBP20.14■□□□□ 0.81
CHMP7-203ENST00000517325 CASP7P55210 303 aa20.14■□□□□ 0.81
CHMP7-203ENST00000517325 COL15A1P39059 1388 aa20.13■□□□□ 0.81
CHMP7-203ENST00000517325 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
CHMP7-203ENST00000517325 ERVV-2B6SEH9 535 aa20.13■□□□□ 0.81
CHMP7-203ENST00000517325 CPA1P15085 419 aa20.13■□□□□ 0.81
CHMP7-203ENST00000517325 AK2P54819 239 aa20.13■□□□□ 0.81
CHMP7-203ENST00000517325 NMIQ13287 307 aaPredicted RBP20.13■□□□□ 0.81
CHMP7-203ENST00000517325 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
CHMP7-203ENST00000517325 KCPQ6ZWJ8 1503 aa20.13■□□□□ 0.81
CHMP7-203ENST00000517325 IL2RBP14784 551 aa20.12■□□□□ 0.81
CHMP7-203ENST00000517325 PRPF40BQ6NWY9 871 aaKnown RBP20.12■□□□□ 0.81
CHMP7-203ENST00000517325 CCDC171Q6TFL3 1326 aa20.12■□□□□ 0.81
CHMP7-203ENST00000517325 CASTP20810 708 aaKnown RBP20.12■□□□□ 0.81
CHMP7-203ENST00000517325 NKX1-1Q15270 411 aaPredicted RBP20.12■□□□□ 0.81
CHMP7-203ENST00000517325 TTLL7Q6ZT98 887 aa20.12■□□□□ 0.81
CHMP7-203ENST00000517325 RUFY3Q7L099 469 aa20.12■□□□□ 0.81
CHMP7-203ENST00000517325 LARP6Q9BRS8 491 aaKnown RBP20.12■□□□□ 0.81
CHMP7-203ENST00000517325 CARD10Q9BWT7 1032 aa20.12■□□□□ 0.81
CHMP7-203ENST00000517325 ADCK5Q3MIX3 580 aa20.11■□□□□ 0.81
CHMP7-203ENST00000517325 DDX54Q8TDD1 881 aaKnown RBP20.11■□□□□ 0.81
CHMP7-203ENST00000517325 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
CHMP7-203ENST00000517325 NCLP19338 710 aaKnown RBP20.11■□□□□ 0.81
CHMP7-203ENST00000517325 TFCP2Q12800 502 aa20.11■□□□□ 0.81
CHMP7-203ENST00000517325 CAVIN1Q6NZI2 390 aaKnown RBP20.11■□□□□ 0.81
CHMP7-203ENST00000517325 GPT2Q8TD30 523 aa20.11■□□□□ 0.81
CHMP7-203ENST00000517325 SHANK3Q9BYB0 1731 aa20.11■□□□□ 0.81
CHMP7-203ENST00000517325 A1BGP04217 495 aa20.1■□□□□ 0.81
CHMP7-203ENST00000517325 NECTIN1Q15223 517 aa20.1■□□□□ 0.81
CHMP7-203ENST00000517325 KCNB2Q92953 911 aa20.1■□□□□ 0.81
CHMP7-203ENST00000517325 FSD1Q9BTV5 496 aa20.1■□□□□ 0.81
CHMP7-203ENST00000517325 DBNLQ9UJU6 430 aaKnown RBP20.1■□□□□ 0.81
CHMP7-203ENST00000517325 PAPPAQ13219 1627 aa20.1■□□□□ 0.81
CHMP7-203ENST00000517325 A0A0D9SFI3 127 aa20.1■□□□□ 0.81
CHMP7-203ENST00000517325 HIP1O00291 1037 aa20.1■□□□□ 0.81
CHMP7-203ENST00000517325 TNNI3KQ59H18 835 aa20.1■□□□□ 0.81
CHMP7-203ENST00000517325 FPGT-TNNI3KV9GXZ4 949 aa20.1■□□□□ 0.81
CHMP7-203ENST00000517325 EDC3Q96F86 508 aaKnown RBP20.09■□□□□ 0.81
CHMP7-203ENST00000517325 JAKMIP1Q96N16 626 aaKnown RBP20.09■□□□□ 0.81
CHMP7-203ENST00000517325 LIMCH1Q9UPQ0 1083 aa20.09■□□□□ 0.81
CHMP7-203ENST00000517325 RBM8AQ9Y5S9 174 aaKnown RBP20.09■□□□□ 0.81
CHMP7-203ENST00000517325 LMBR1LQ6UX01 489 aa20.08■□□□□ 0.81
CHMP7-203ENST00000517325 SNRKQ9NRH2 765 aa20.08■□□□□ 0.81
CHMP7-203ENST00000517325 NUP188Q5SRE5 1749 aa20.08■□□□□ 0.8
CHMP7-203ENST00000517325 H7C1W4 665 aa20.07■□□□□ 0.8
CHMP7-203ENST00000517325 FOXO4P98177 505 aa20.07■□□□□ 0.8
CHMP7-203ENST00000517325 ZSCAN23Q3MJ62 389 aa20.07■□□□□ 0.8
CHMP7-203ENST00000517325 MAP4K1Q92918 833 aa20.07■□□□□ 0.8
CHMP7-203ENST00000517325 RPAP1Q9BWH6 1393 aaPredicted RBP20.07■□□□□ 0.8
CHMP7-203ENST00000517325 LARGE1O95461 756 aa20.07■□□□□ 0.8
CHMP7-203ENST00000517325 ZSWIM6Q9HCJ5 1215 aa20.07■□□□□ 0.8
CHMP7-203ENST00000517325 TNS2Q63HR2 1409 aa20.07■□□□□ 0.8
CHMP7-203ENST00000517325 CREB3L3Q68CJ9 461 aa20.06■□□□□ 0.8
CHMP7-203ENST00000517325 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
CHMP7-203ENST00000517325 MED23Q9ULK4 1368 aa20.06■□□□□ 0.8
CHMP7-203ENST00000517325 ATP5JP18859 108 aa20.06■□□□□ 0.8
CHMP7-203ENST00000517325 ZNF445P59923 1031 aa20.06■□□□□ 0.8
CHMP7-203ENST00000517325 ZBTB3Q9H5J0 574 aa20.06■□□□□ 0.8
CHMP7-203ENST00000517325 RBM27Q9P2N5 1060 aaKnown RBP20.06■□□□□ 0.8
CHMP7-203ENST00000517325 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
CHMP7-203ENST00000517325 EVA1CP58658 441 aa20.06■□□□□ 0.8
CHMP7-203ENST00000517325 PDRG1Q9NUG6 133 aa20.06■□□□□ 0.8
CHMP7-203ENST00000517325 CWC25Q9NXE8 425 aaPredicted RBP20.06■□□□□ 0.8
CHMP7-203ENST00000517325 NDUFB9Q9Y6M9 179 aa20.06■□□□□ 0.8
CHMP7-203ENST00000517325 TJP1Q07157 1748 aa20.05■□□□□ 0.8
CHMP7-203ENST00000517325 VPS53Q5VIR6 699 aa20.05■□□□□ 0.8
CHMP7-203ENST00000517325 ZNF589Q86UQ0 364 aaPredicted RBP20.05■□□□□ 0.8
CHMP7-203ENST00000517325 DBNDD2Q9BQY9 259 aa20.05■□□□□ 0.8
CHMP7-203ENST00000517325 CHMP3Q9Y3E7 222 aa20.05■□□□□ 0.8
CHMP7-203ENST00000517325 KDM4FA0A1W2PPD8 638 aa20.05■□□□□ 0.8
CHMP7-203ENST00000517325 KCNJ4P48050 445 aa20.05■□□□□ 0.8
CHMP7-203ENST00000517325 CYP46A1Q9Y6A2 500 aa20.05■□□□□ 0.8
CHMP7-203ENST00000517325 TOGARAM1Q9Y4F4 1720 aa20.04■□□□□ 0.8
CHMP7-203ENST00000517325 WDR33Q9C0J8 1336 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1467.9 ms