RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 NSD2O96028 1365 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NPC1L1Q9UHC9 1359 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SOS2Q07890 1332 aaPredicted RBP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 WASHC2AQ641Q2 1341 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 COL16A1Q07092 1604 aaPredicted RBP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TTC24A2A3L6 582 aaPredicted RBP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CSB-PGBD3P0DP91 1061 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SRPK2P78362 688 aaKnown RBP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SKOR1P84550 965 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PDE4CQ08493 712 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP4Q13107 963 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SAFB2Q14151 953 aaKnown RBP eCLIP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 EML3Q32P44 896 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TSGA10IPQ3SY00 556 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 C4orf48Q5BLP8 95 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 LARP1Q6PKG0 1096 aaKnown RBP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 BRINP3Q76B58 766 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SH3RF1Q7Z6J0 888 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NUDT16Q96DE0 195 aaKnown RBP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 OCSTAMPQ9BR26 566 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 HIRIP3Q9BW71 556 aaPredicted RBP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PRKD2Q9BZL6 878 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SLAIN2Q9P270 581 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 MKRN1Q9UHC7 482 aaKnown RBP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CDV3Q9UKY7 258 aaKnown RBP3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 DOLKQ9UPQ8 538 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NOD1Q9Y239 953 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PCDHB11Q9Y5F2 797 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 WASF2Q9Y6W5 498 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 AKAP12Q02952 1782 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 MON2Q7Z3U7 1717 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TNS3Q68CZ2 1445 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ROBO1Q9Y6N7 1651 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ARHGEF10O15013 1369 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP31Q70CQ4 1352 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 COL22A1Q8NFW1 1626 aaPredicted RBP3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TTC21AQ8NDW8 1320 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L3A6NCW0 530 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L4A6NCW7 530 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L5A8MUK1 530 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 UBAP1LF5GYI3 381 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ALDH1A1P00352 501 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 MYCP01106 439 aaPredicted RBP3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 RASA1P20936 1047 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PSME1Q06323 249 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 MAP7D1Q3KQU3 841 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ZNF697Q5TEC3 545 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SPRYD7Q5W111 196 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L2Q6R6M4 530 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L1Q7RTZ2 530 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 HDGFL2Q7Z4V5 671 aaPredicted RBP3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PLPP7Q8NBV4 271 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 FBXO41Q8TF61 875 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PBXIP1Q96AQ6 731 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ORAI2Q96SN7 254 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TERF2IPQ9NYB0 399 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 MAFBQ9Y5Q3 323 aaPredicted RBP3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SLIT3O75094 1523 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ABCC6O95255 1503 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TRPM3Q9HCF6 1732 aaPredicted RBP3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ALS2Q96Q42 1657 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 OVOS2A0A0J9YW53 1432 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 OVOS2Q6IE36 1432 aa3.01□□□□□ -1.93
SCARNA16.3-201ENST00000516595 KTN1Q86UP2 1357 aaKnown RBP3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP19O94966 1318 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ACEP12821 1306 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 C11orf95C9JLR9 678 aaPredicted RBP3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 LZTS3O60299 673 aaPredicted RBP3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NCOA4Q13772 614 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ESCO1Q5FWF5 840 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ZNF598Q86UK7 904 aaKnown RBP3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TRIM50Q86XT4 487 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 AEBP1Q8IUX7 1158 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CYP4X1Q8N118 509 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PHTF2Q8N3S3 785 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NFATC2IPQ8NCF5 419 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 FAM200AQ8TCP9 573 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 MRGPRX2Q96LB1 330 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 UCN2Q96RP3 112 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CDCA7Q9BWT1 371 aaPredicted RBP3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CABP1Q9NZU7 370 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SHPRHQ149N8 1683 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SMG6Q86US8 1419 aaKnown RBP3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NSD3Q9BZ95 1437 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CPDO75976 1380 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 KIF24Q5T7B8 1368 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 AATKQ6ZMQ8 1374 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PNPLA6Q8IY17 1366 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 JCADQ9P266 1359 aa3□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PHLPP1O60346 1717 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CRYBG1Q9Y4K1 1723 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CGNL1Q0VF96 1302 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SPATA31A6Q5VVP1 1343 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SPATA31A3Q5VYP0 1347 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TTC21BQ7Z4L5 1316 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PIK3C2AO00443 1686 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 A0A0G2JS52 829 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ATP5J2-PTCD1G3V325 749 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ERVH48-1M5A8F1 160 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 WNT7AO00755 349 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms