RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 MMP20O60882 483 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 ADAM11O75078 769 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 NID1P14543 1247 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 NFKB1P19838 968 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 NOS3P29474 1203 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 ADMP35318 185 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 DGKGP49619 791 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 AFF1P51825 1210 aaKnown RBP0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 PSME1Q06323 249 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 PTK7Q13308 1070 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 DGKZQ13574 1117 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 SPRED3Q2MJR0 410 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 RASIP1Q5U651 963 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 GDF6Q6KF10 455 aaPredicted RBP0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 USP17L2Q6R6M4 530 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 BICDL1Q6ZP65 573 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 USP17L1Q7RTZ2 530 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 UBE3DQ7Z6J8 389 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 ALDH16A1Q8IZ83 802 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 RGL4Q8IZJ4 473 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 CMTR1Q8N1G2 835 aaKnown RBP0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 UBASH3BQ8TF42 649 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 GLMNQ92990 594 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 TRIM52Q96A61 297 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 WDR89Q96FK6 387 aaPredicted RBP0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 KLHDC7BQ96G42 594 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 CEP63Q96MT8 703 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 SLC4A9Q96Q91 983 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 ARID3AQ99856 593 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 CCDC87Q9NVE4 849 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 DNAJB12Q9NXW2 375 aaKnown RBP0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 TMEM63CQ9P1W3 806 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 KCNMB2Q9Y691 235 aa0.92□□□□□ -2.26
RNU6-1049P-201ENST00000516414 HMX2A2RU54 273 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 CDK2AP1O14519 115 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 HYAL3O43820 417 aaPredicted RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 PPP1R12BO60237 982 aaPredicted RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 TGFB1P01137 390 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 GNRH1P01148 92 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 INPP5BP32019 993 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 GALK1P51570 392 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 TYRO3Q06418 890 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 SPEM2Q0P670 501 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 BNIP3Q12983 259 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 MTFR1Q15390 333 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 SLFNL1Q499Z3 407 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 TMEM259Q4ZIN3 620 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 NOM1Q5C9Z4 860 aaKnown RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 TRAPPC3LQ5T215 181 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 LCE3BQ5TA77 95 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 TMEM164Q5U3C3 297 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 PSAPL1Q6NUJ1 521 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 C1orf127Q8N9H9 656 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 STK35Q8TDR2 534 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 GPR152Q8TDT2 470 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 RHBDD1Q8TEB9 315 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 NECTIN2Q92692 538 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 BCANQ96GW7 911 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 DDRGK1Q96HY6 314 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 POP1Q99575 1024 aaKnown RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 LPIN3Q9BQK8 851 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 C2orf49Q9BVC5 232 aaPredicted RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 ZC3H12CQ9C0D7 883 aaKnown RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 SMG9Q9H0W8 520 aaKnown RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 RASSF4Q9H2L5 321 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 BRD7Q9NPI1 651 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 PRDM7Q9NQW5 492 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 FOXD3Q9UJU5 478 aaPredicted RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 WWC3Q9ULE0 1092 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 ZNF330Q9Y3S2 320 aaPredicted RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 PCDHGC4Q9Y5F7 938 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 MAFBQ9Y5Q3 323 aaPredicted RBP0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 NDUFB9Q9Y6M9 179 aa0.91□□□□□ -2.26
RNU6-1049P-201ENST00000516414 A0A0A0MRY4 1105 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 KRTAP4-8A0A0G2JLE6 195 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 K7ELQ4 463 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 NFKBIEO00221 500 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 EREGO14944 169 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 DYRK3O43781 588 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 MICAL2O94851 1124 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 EPHA1P21709 976 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ADH7P40394 386 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 IDH3AP50213 366 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PTPN11Q06124 597 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 DHX9Q08211 1270 aaKnown RBP0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 USP4Q13107 963 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SEMA3FQ13275 785 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ZNF211Q13398 564 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 MBTPS1Q14703 1052 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SETDB1Q15047 1291 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ZNF124Q15973 351 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 OCLNQ16625 522 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ZMYM1Q5SVZ6 1142 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 KANK3Q6NY19 840 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ZNF574Q6ZN55 896 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 BTLAQ7Z6A9 289 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ARMC10Q8N2F6 343 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 BEND7Q8N7W2 519 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ARMC2Q8NEN0 867 aa0.9□□□□□ -2.27
RNU6-1049P-201ENST00000516414 WFDC12Q8WWY7 111 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms