RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 SNED1Q8TER0 1413 aa15.64■□□□□ 0.09
SDHA-219ENST00000515815 RPGRQ92834 1020 aaKnown RBP15.64■□□□□ 0.09
SDHA-219ENST00000515815 ADAMTSL1Q8N6G6 1762 aa15.63■□□□□ 0.09
SDHA-219ENST00000515815 ERFEQ4G0M1 354 aa15.63■□□□□ 0.09
SDHA-219ENST00000515815 C16orf71Q8IYS4 520 aaPredicted RBP15.63■□□□□ 0.09
SDHA-219ENST00000515815 XAGE3Q8WTP9 111 aa15.63■□□□□ 0.09
SDHA-219ENST00000515815 AIMP1Q12904 312 aaKnown RBP15.62■□□□□ 0.09
SDHA-219ENST00000515815 CRY2Q49AN0 593 aa15.62■□□□□ 0.09
SDHA-219ENST00000515815 CCDC184Q52MB2 194 aa15.62■□□□□ 0.09
SDHA-219ENST00000515815 ZNF34Q8IZ26 560 aa15.62■□□□□ 0.09
SDHA-219ENST00000515815 DBF4Q9UBU7 674 aaPredicted RBP15.62■□□□□ 0.09
SDHA-219ENST00000515815 DUOX1Q9NRD9 1551 aa15.62■□□□□ 0.09
SDHA-219ENST00000515815 KLRG2A4D1S0 409 aaPredicted RBP15.61■□□□□ 0.09
SDHA-219ENST00000515815 PRELPP51888 382 aa15.61■□□□□ 0.09
SDHA-219ENST00000515815 SUSD4Q5VX71 490 aa15.61■□□□□ 0.09
SDHA-219ENST00000515815 DUSP27Q5VZP5 1158 aa15.61■□□□□ 0.09
SDHA-219ENST00000515815 COPS6Q7L5N1 327 aa15.61■□□□□ 0.09
SDHA-219ENST00000515815 ZNF853P0CG23 659 aa15.6■□□□□ 0.09
SDHA-219ENST00000515815 COL4A5P29400 1685 aa15.6■□□□□ 0.09
SDHA-219ENST00000515815 TOMM70O94826 608 aa15.59■□□□□ 0.09
SDHA-219ENST00000515815 ALDH1B1P30837 517 aa15.59■□□□□ 0.09
SDHA-219ENST00000515815 UTP14AQ9BVJ6 771 aaKnown RBP15.59■□□□□ 0.09
SDHA-219ENST00000515815 COL4A1P02462 1669 aa15.59■□□□□ 0.09
SDHA-219ENST00000515815 HSPA6P17066 643 aa15.58■□□□□ 0.08
SDHA-219ENST00000515815 FKBP4Q02790 459 aaKnown RBP eCLIP15.58■□□□□ 0.08
SDHA-219ENST00000515815 GOLGA2Q08379 1002 aa15.58■□□□□ 0.08
SDHA-219ENST00000515815 PLBD2Q8NHP8 589 aa15.58■□□□□ 0.08
SDHA-219ENST00000515815 HYPKQ9NX55 129 aa15.58■□□□□ 0.08
SDHA-219ENST00000515815 SH3TC1Q8TE82 1336 aa15.58■□□□□ 0.08
SDHA-219ENST00000515815 TRPM7Q96QT4 1865 aa15.58■□□□□ 0.08
SDHA-219ENST00000515815 GLTPD2A6NH11 291 aa15.57■□□□□ 0.08
SDHA-219ENST00000515815 PPEF1O14829 653 aaPredicted RBP15.57■□□□□ 0.08
SDHA-219ENST00000515815 CCDC27Q2M243 656 aa15.57■□□□□ 0.08
SDHA-219ENST00000515815 NLRP10Q86W26 655 aa15.57■□□□□ 0.08
SDHA-219ENST00000515815 RBM17Q96I25 401 aaKnown RBP15.57■□□□□ 0.08
SDHA-219ENST00000515815 RTKN2Q8IZC4 609 aa15.56■□□□□ 0.08
SDHA-219ENST00000515815 RBM46Q8TBY0 533 aaKnown RBP15.56■□□□□ 0.08
SDHA-219ENST00000515815 NLRP3Q96P20 1036 aa15.56■□□□□ 0.08
SDHA-219ENST00000515815 ABCC4O15439 1325 aa15.55■□□□□ 0.08
SDHA-219ENST00000515815 TCIRG1Q13488 830 aa15.55■□□□□ 0.08
SDHA-219ENST00000515815 DPY19L2Q6NUT2 758 aa15.55■□□□□ 0.08
SDHA-219ENST00000515815 C7orf43Q8WVR3 580 aa15.55■□□□□ 0.08
SDHA-219ENST00000515815 TSR2Q969E8 191 aaKnown RBP15.55■□□□□ 0.08
SDHA-219ENST00000515815 ZNF646O15015 1829 aaPredicted RBP15.54■□□□□ 0.08
SDHA-219ENST00000515815 IL16Q14005 1332 aa15.54■□□□□ 0.08
SDHA-219ENST00000515815 HOXA10P31260 410 aaPredicted RBP15.54■□□□□ 0.08
SDHA-219ENST00000515815 CC2D2BQ6DHV5 1058 aa15.54■□□□□ 0.08
SDHA-219ENST00000515815 OLFM4Q6UX06 510 aa15.54■□□□□ 0.08
SDHA-219ENST00000515815 C3orf67Q6ZVT6 689 aa15.54■□□□□ 0.08
SDHA-219ENST00000515815 CRAMP1Q96RY5 1269 aa15.54■□□□□ 0.08
SDHA-219ENST00000515815 CHMP4AQ9BY43 222 aa15.54■□□□□ 0.08
SDHA-219ENST00000515815 RRAGCQ9HB90 399 aa15.54■□□□□ 0.08
SDHA-219ENST00000515815 TRMT112Q9UI30 125 aaKnown RBP15.54■□□□□ 0.08
SDHA-219ENST00000515815 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
SDHA-219ENST00000515815 ELL2O00472 640 aaPredicted RBP15.53■□□□□ 0.08
SDHA-219ENST00000515815 IARSP41252 1262 aaKnown RBP15.53■□□□□ 0.08
SDHA-219ENST00000515815 CCDC30Q5VVM6 783 aa15.53■□□□□ 0.08
SDHA-219ENST00000515815 ANKRD13DQ6ZTN6 518 aa15.53■□□□□ 0.08
SDHA-219ENST00000515815 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
SDHA-219ENST00000515815 SMC1BQ8NDV3 1235 aa15.53■□□□□ 0.08
SDHA-219ENST00000515815 PSMD1Q99460 953 aa15.53■□□□□ 0.08
SDHA-219ENST00000515815 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
SDHA-219ENST00000515815 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
SDHA-219ENST00000515815 ZNF541Q9H0D2 1346 aa15.52■□□□□ 0.08
SDHA-219ENST00000515815 DDX58O95786 925 aaKnown RBP15.52■□□□□ 0.08
SDHA-219ENST00000515815 VEGFAP15692 232 aaPredicted RBP15.52■□□□□ 0.08
SDHA-219ENST00000515815 FSTL1Q12841 308 aa15.52■□□□□ 0.08
SDHA-219ENST00000515815 GRIPAP1Q4V328 841 aa15.52■□□□□ 0.08
SDHA-219ENST00000515815 RIC3Q7Z5B4 369 aa15.52■□□□□ 0.08
SDHA-219ENST00000515815 C8orf58Q8NAV2 365 aa15.52■□□□□ 0.08
SDHA-219ENST00000515815 STK31Q9BXU1 1019 aa15.52■□□□□ 0.08
SDHA-219ENST00000515815 APLP1P51693 650 aa15.51■□□□□ 0.07
SDHA-219ENST00000515815 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
SDHA-219ENST00000515815 ISCA1Q9BUE6 129 aa15.51■□□□□ 0.07
SDHA-219ENST00000515815 PHAXQ9H814 394 aaKnown RBP15.51■□□□□ 0.07
SDHA-219ENST00000515815 SCN9AQ15858 1988 aa15.5■□□□□ 0.07
SDHA-219ENST00000515815 ATP5J2-PTCD1G3V325 749 aa15.5■□□□□ 0.07
SDHA-219ENST00000515815 HCLS1P14317 486 aaPredicted RBP15.5■□□□□ 0.07
SDHA-219ENST00000515815 TWISTNBQ3B726 338 aaPredicted RBP15.5■□□□□ 0.07
SDHA-219ENST00000515815 SLC10A5Q5PT55 438 aa15.5■□□□□ 0.07
SDHA-219ENST00000515815 DDX46Q7L014 1031 aaKnown RBP15.5■□□□□ 0.07
SDHA-219ENST00000515815 ZNF428Q96B54 188 aa15.5■□□□□ 0.07
SDHA-219ENST00000515815 ARAP2Q8WZ64 1704 aa15.5■□□□□ 0.07
SDHA-219ENST00000515815 IQCA1LA6NCM1 817 aa15.49■□□□□ 0.07
SDHA-219ENST00000515815 TCERG1O14776 1098 aaKnown RBP15.49■□□□□ 0.07
SDHA-219ENST00000515815 GRAPQ13588 217 aa15.49■□□□□ 0.07
SDHA-219ENST00000515815 TSPYL6Q8N831 410 aa15.49■□□□□ 0.07
SDHA-219ENST00000515815 GRAPLQ8TC17 118 aaPredicted RBP15.49■□□□□ 0.07
SDHA-219ENST00000515815 JDP2Q8WYK2 163 aa15.49■□□□□ 0.07
SDHA-219ENST00000515815 SLC51AQ86UW1 340 aa15.48■□□□□ 0.07
SDHA-219ENST00000515815 FAM9BQ8IZU0 186 aa15.48■□□□□ 0.07
SDHA-219ENST00000515815 SYNE4Q8N205 404 aa15.48■□□□□ 0.07
SDHA-219ENST00000515815 MYD88Q99836 296 aa15.48■□□□□ 0.07
SDHA-219ENST00000515815 ATP6V0A2Q9Y487 856 aa15.48■□□□□ 0.07
SDHA-219ENST00000515815 MYH13Q9UKX3 1938 aa15.48■□□□□ 0.07
SDHA-219ENST00000515815 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
SDHA-219ENST00000515815 DDNO94850 711 aaPredicted RBP15.47■□□□□ 0.07
SDHA-219ENST00000515815 TMC4Q7Z404 712 aa15.47■□□□□ 0.07
SDHA-219ENST00000515815 LARGE2Q8N3Y3 721 aa15.47■□□□□ 0.07
SDHA-219ENST00000515815 SUPT20HQ8NEM7 779 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms