RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 HIRAP54198 1017 aaPredicted RBP6.89□□□□□ -1.31
HERC4-215ENST00000515753 KCNQ4P56696 695 aa6.89□□□□□ -1.31
HERC4-215ENST00000515753 POTEAQ6S8J7 498 aa6.89□□□□□ -1.31
HERC4-215ENST00000515753 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
HERC4-215ENST00000515753 GAS2L2Q8NHY3 880 aa6.89□□□□□ -1.31
HERC4-215ENST00000515753 NUDT8Q8WV74 236 aa6.89□□□□□ -1.31
HERC4-215ENST00000515753 SCG3Q8WXD2 468 aaKnown RBP6.89□□□□□ -1.31
HERC4-215ENST00000515753 UBE2OQ9C0C9 1292 aaKnown RBP6.89□□□□□ -1.31
HERC4-215ENST00000515753 PRDM6Q9NQX0 595 aa6.89□□□□□ -1.31
HERC4-215ENST00000515753 ATAD2Q6PL18 1390 aa6.88□□□□□ -1.31
HERC4-215ENST00000515753 DKK1O94907 266 aa6.88□□□□□ -1.31
HERC4-215ENST00000515753 FOXD4L6Q3SYB3 417 aaPredicted RBP6.88□□□□□ -1.31
HERC4-215ENST00000515753 FOXD4L3Q6VB84 417 aaPredicted RBP6.88□□□□□ -1.31
HERC4-215ENST00000515753 BTLAQ7Z6A9 289 aa6.88□□□□□ -1.31
HERC4-215ENST00000515753 SIX5Q8N196 739 aa6.88□□□□□ -1.31
HERC4-215ENST00000515753 FNBP4Q8N3X1 1017 aaPredicted RBP6.88□□□□□ -1.31
HERC4-215ENST00000515753 RBM19Q9Y4C8 960 aaKnown RBP6.88□□□□□ -1.31
HERC4-215ENST00000515753 M0R2N6 131 aa6.87□□□□□ -1.31
HERC4-215ENST00000515753 DYRK3O43781 588 aa6.87□□□□□ -1.31
HERC4-215ENST00000515753 LILRB5O75023 590 aa6.87□□□□□ -1.31
HERC4-215ENST00000515753 RASA1P20936 1047 aa6.87□□□□□ -1.31
HERC4-215ENST00000515753 JPH1Q9HDC5 661 aaPredicted RBP6.87□□□□□ -1.31
HERC4-215ENST00000515753 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
HERC4-215ENST00000515753 PROSER2Q86WR7 435 aaPredicted RBP6.86□□□□□ -1.31
HERC4-215ENST00000515753 NACC1Q96RE7 527 aa6.86□□□□□ -1.31
HERC4-215ENST00000515753 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
HERC4-215ENST00000515753 TFIP11Q9UBB9 837 aaKnown RBP6.86□□□□□ -1.31
HERC4-215ENST00000515753 SLC6A14Q9UN76 642 aa6.86□□□□□ -1.31
HERC4-215ENST00000515753 A0A0A0MRY4 1105 aa6.85□□□□□ -1.31
HERC4-215ENST00000515753 SELPP16109 830 aa6.85□□□□□ -1.31
HERC4-215ENST00000515753 SHISA2Q6UWI4 295 aa6.85□□□□□ -1.31
HERC4-215ENST00000515753 HINFPQ9BQA5 517 aa6.85□□□□□ -1.31
HERC4-215ENST00000515753 GTF3C3Q9Y5Q9 886 aa6.85□□□□□ -1.31
HERC4-215ENST00000515753 PRSS36Q5K4E3 855 aa6.84□□□□□ -1.31
HERC4-215ENST00000515753 PSAPL1Q6NUJ1 521 aa6.84□□□□□ -1.31
HERC4-215ENST00000515753 CLUAP1Q96AJ1 413 aa6.84□□□□□ -1.31
HERC4-215ENST00000515753 GSX2Q9BZM3 304 aa6.84□□□□□ -1.31
HERC4-215ENST00000515753 DNAJB12Q9NXW2 375 aaKnown RBP6.84□□□□□ -1.31
HERC4-215ENST00000515753 NAGPAQ9UK23 515 aa6.84□□□□□ -1.31
HERC4-215ENST00000515753 NFKB1P19838 968 aa6.83□□□□□ -1.32
HERC4-215ENST00000515753 SEC13P55735 322 aa6.83□□□□□ -1.32
HERC4-215ENST00000515753 MBTPS1Q14703 1052 aa6.83□□□□□ -1.32
HERC4-215ENST00000515753 DMRTC2Q8IXT2 367 aaPredicted RBP6.83□□□□□ -1.32
HERC4-215ENST00000515753 GLMNQ92990 594 aa6.83□□□□□ -1.32
HERC4-215ENST00000515753 PNMA5Q96PV4 448 aa6.83□□□□□ -1.32
HERC4-215ENST00000515753 BCS1LQ9Y276 419 aa6.83□□□□□ -1.32
HERC4-215ENST00000515753 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.83□□□□□ -1.32
HERC4-215ENST00000515753 C9orf172C9J069 976 aa6.82□□□□□ -1.32
HERC4-215ENST00000515753 AFF1P51825 1210 aaKnown RBP6.82□□□□□ -1.32
HERC4-215ENST00000515753 ADGRE1Q14246 886 aa6.82□□□□□ -1.32
HERC4-215ENST00000515753 STAG2Q8N3U4 1231 aa6.82□□□□□ -1.32
HERC4-215ENST00000515753 MAFBQ9Y5Q3 323 aaPredicted RBP6.82□□□□□ -1.32
HERC4-215ENST00000515753 ELNP15502 786 aa6.81□□□□□ -1.32
HERC4-215ENST00000515753 RAC1P63000 192 aa6.81□□□□□ -1.32
HERC4-215ENST00000515753 DPYDQ12882 1025 aa6.81□□□□□ -1.32
HERC4-215ENST00000515753 CCINQ13939 588 aa6.81□□□□□ -1.32
HERC4-215ENST00000515753 CRTC2Q53ET0 693 aaPredicted RBP6.81□□□□□ -1.32
HERC4-215ENST00000515753 LARP1Q6PKG0 1096 aaKnown RBP6.81□□□□□ -1.32
HERC4-215ENST00000515753 KRT25Q7Z3Z0 450 aa6.81□□□□□ -1.32
HERC4-215ENST00000515753 KLK14Q9P0G3 267 aa6.81□□□□□ -1.32
HERC4-215ENST00000515753 RGS9O75916 674 aaPredicted RBP6.8□□□□□ -1.32
HERC4-215ENST00000515753 CPB1P15086 417 aa6.8□□□□□ -1.32
HERC4-215ENST00000515753 GRNP28799 593 aaKnown RBP6.8□□□□□ -1.32
HERC4-215ENST00000515753 HIF1AQ16665 826 aa6.8□□□□□ -1.32
HERC4-215ENST00000515753 RTN1Q16799 776 aa6.8□□□□□ -1.32
HERC4-215ENST00000515753 FAM35AQ86V20 835 aa6.8□□□□□ -1.32
HERC4-215ENST00000515753 LENG1Q96BZ8 264 aaPredicted RBP6.8□□□□□ -1.32
HERC4-215ENST00000515753 KRTAP4-12Q9BQ66 201 aa6.8□□□□□ -1.32
HERC4-215ENST00000515753 DMGDHQ9UI17 866 aaKnown RBP6.8□□□□□ -1.32
HERC4-215ENST00000515753 USP21Q9UK80 565 aa6.8□□□□□ -1.32
HERC4-215ENST00000515753 TGFBR3LH3BV60 316 aa6.79□□□□□ -1.32
HERC4-215ENST00000515753 TXNRD3Q86VQ6 643 aa6.79□□□□□ -1.32
HERC4-215ENST00000515753 TP53INP1Q96A56 240 aa6.79□□□□□ -1.32
HERC4-215ENST00000515753 TARSP26639 723 aaKnown RBP6.78□□□□□ -1.32
HERC4-215ENST00000515753 IDH3AP50213 366 aa6.78□□□□□ -1.32
HERC4-215ENST00000515753 MLLT1Q03111 559 aaPredicted RBP6.78□□□□□ -1.32
HERC4-215ENST00000515753 PLAURQ03405 335 aa6.78□□□□□ -1.32
HERC4-215ENST00000515753 PTK7Q13308 1070 aa6.78□□□□□ -1.32
HERC4-215ENST00000515753 IER5Q5VY09 327 aa6.78□□□□□ -1.32
HERC4-215ENST00000515753 FMR1NBQ8N0W7 255 aaPredicted RBP6.78□□□□□ -1.32
HERC4-215ENST00000515753 ZFP64Q9NPA5 681 aa6.78□□□□□ -1.32
HERC4-215ENST00000515753 ZFATQ9P243 1243 aa6.78□□□□□ -1.32
HERC4-215ENST00000515753 ZBTB42B2RXF5 422 aa6.77□□□□□ -1.33
HERC4-215ENST00000515753 NRG1Q02297 640 aaPredicted RBP6.77□□□□□ -1.33
HERC4-215ENST00000515753 DGKZQ13574 1117 aa6.77□□□□□ -1.33
HERC4-215ENST00000515753 ARTNQ5T4W7 220 aa6.77□□□□□ -1.33
HERC4-215ENST00000515753 KANK4Q5T7N3 995 aaPredicted RBP6.77□□□□□ -1.33
HERC4-215ENST00000515753 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
HERC4-215ENST00000515753 EFCC1Q9HA90 598 aa6.77□□□□□ -1.33
HERC4-215ENST00000515753 SASH3O75995 380 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 H2AFB1P0C5Y9 115 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 H2AFB2P0C5Z0 115 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 IGFBP4P22692 258 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 INPP5BP32019 993 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 PERM1Q5SV97 790 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 MSL1Q68DK7 614 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 HFE2Q6ZVN8 426 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 ILDR2Q71H61 639 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 ANKMY2Q8IV38 441 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 CALR3Q96L12 384 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms