RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 CWC22Q9HCG8 908 aaKnown RBP18.53■□□□□ 0.56
SDHA-218ENST00000515752 PHLPP1O60346 1717 aa18.52■□□□□ 0.56
SDHA-218ENST00000515752 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.55
SDHA-218ENST00000515752 HSPA4P34932 840 aa18.51■□□□□ 0.55
SDHA-218ENST00000515752 RAD50Q92878 1312 aa18.51■□□□□ 0.55
SDHA-218ENST00000515752 ADAMTS2O95450 1211 aa18.51■□□□□ 0.55
SDHA-218ENST00000515752 MAP4K4O95819 1239 aaPredicted RBP18.51■□□□□ 0.55
SDHA-218ENST00000515752 DDB1Q16531 1140 aa18.51■□□□□ 0.55
SDHA-218ENST00000515752 GPR108Q9NPR9 543 aa18.51■□□□□ 0.55
SDHA-218ENST00000515752 FBXO3Q9UK99 471 aa18.51■□□□□ 0.55
SDHA-218ENST00000515752 BARGINQ6ZT62 677 aa18.5■□□□□ 0.55
SDHA-218ENST00000515752 TICAM2Q86XR7 235 aa18.5■□□□□ 0.55
SDHA-218ENST00000515752 CCDC8Q9H0W5 538 aaPredicted RBP18.5■□□□□ 0.55
SDHA-218ENST00000515752 MAP3K15Q6ZN16 1313 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 ATP5JP18859 108 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 NEK4P51957 841 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 TNNI3KQ59H18 835 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 KLHDC4Q8TBB5 520 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 FPGT-TNNI3KV9GXZ4 949 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 PCCAP05165 728 aaPredicted RBP18.49■□□□□ 0.55
SDHA-218ENST00000515752 CYP19A1P11511 503 aaPredicted RBP18.49■□□□□ 0.55
SDHA-218ENST00000515752 PTMSP20962 102 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 MCM4P33991 863 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 IL15P40933 162 aaPredicted RBP18.49■□□□□ 0.55
SDHA-218ENST00000515752 GSE1Q14687 1217 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 RAB3GAP1Q15042 981 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 CWC27Q6UX04 472 aaKnown RBP18.49■□□□□ 0.55
SDHA-218ENST00000515752 GIGYF2Q6Y7W6 1299 aaKnown RBP18.49■□□□□ 0.55
SDHA-218ENST00000515752 JARID2Q92833 1246 aaPredicted RBP18.49■□□□□ 0.55
SDHA-218ENST00000515752 GBP4Q96PP9 640 aa18.49■□□□□ 0.55
SDHA-218ENST00000515752 SPATA31A5Q5VU36 1347 aa18.48■□□□□ 0.55
SDHA-218ENST00000515752 SPATA31A7Q8IWB4 1347 aa18.48■□□□□ 0.55
SDHA-218ENST00000515752 DDX11L8A8MPP1 907 aa18.48■□□□□ 0.55
SDHA-218ENST00000515752 CIAO1O76071 339 aa18.48■□□□□ 0.55
SDHA-218ENST00000515752 NUCB2P80303 420 aa18.48■□□□□ 0.55
SDHA-218ENST00000515752 PLA2G12BQ9BX93 195 aa18.48■□□□□ 0.55
SDHA-218ENST00000515752 LSG1Q9H089 658 aaKnown RBP18.48■□□□□ 0.55
SDHA-218ENST00000515752 AK9Q5TCS8 1911 aa18.48■□□□□ 0.55
SDHA-218ENST00000515752 ITGB4P16144 1822 aa18.47■□□□□ 0.55
SDHA-218ENST00000515752 WNK3Q9BYP7 1800 aa18.47■□□□□ 0.55
SDHA-218ENST00000515752 TFCP2Q12800 502 aa18.47■□□□□ 0.55
SDHA-218ENST00000515752 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
SDHA-218ENST00000515752 CHMP3Q9Y3E7 222 aa18.47■□□□□ 0.55
SDHA-218ENST00000515752 ERVV-1B6SEH8 477 aa18.46■□□□□ 0.55
SDHA-218ENST00000515752 IL6STP40189 918 aaPredicted RBP18.46■□□□□ 0.55
SDHA-218ENST00000515752 PRIM1P49642 420 aaKnown RBP18.46■□□□□ 0.55
SDHA-218ENST00000515752 ZBTB38Q8NAP3 1195 aaPredicted RBP18.46■□□□□ 0.55
SDHA-218ENST00000515752 SNRKQ9NRH2 765 aa18.46■□□□□ 0.55
SDHA-218ENST00000515752 RFX7Q2KHR2 1363 aa18.46■□□□□ 0.55
SDHA-218ENST00000515752 ZNF330Q9Y3S2 320 aaPredicted RBP18.46■□□□□ 0.55
SDHA-218ENST00000515752 NRAPQ86VF7 1730 aa18.46■□□□□ 0.54
SDHA-218ENST00000515752 SLIT2O94813 1529 aa18.45■□□□□ 0.54
SDHA-218ENST00000515752 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
SDHA-218ENST00000515752 CDHR2Q9BYE9 1310 aa18.45■□□□□ 0.54
SDHA-218ENST00000515752 EYA2O00167 538 aa18.44■□□□□ 0.54
SDHA-218ENST00000515752 CCDC57Q2TAC2 916 aa18.44■□□□□ 0.54
SDHA-218ENST00000515752 BOLA2Q9H3K6 86 aa18.44■□□□□ 0.54
SDHA-218ENST00000515752 TLR7Q9NYK1 1049 aaKnown RBP18.44■□□□□ 0.54
SDHA-218ENST00000515752 DBNLQ9UJU6 430 aaKnown RBP18.44■□□□□ 0.54
SDHA-218ENST00000515752 PALD1Q9ULE6 856 aa18.44■□□□□ 0.54
SDHA-218ENST00000515752 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.44■□□□□ 0.54
SDHA-218ENST00000515752 FSD1Q9BTV5 496 aa18.44■□□□□ 0.54
SDHA-218ENST00000515752 IL25Q9H293 177 aa18.44■□□□□ 0.54
SDHA-218ENST00000515752 NUTM2BA6NNL0 878 aaPredicted RBP18.43■□□□□ 0.54
SDHA-218ENST00000515752 NUTM2EB1AL46 878 aaPredicted RBP18.43■□□□□ 0.54
SDHA-218ENST00000515752 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
SDHA-218ENST00000515752 CLEC17AQ6ZS10 378 aa18.43■□□□□ 0.54
SDHA-218ENST00000515752 ATG9AQ7Z3C6 839 aa18.43■□□□□ 0.54
SDHA-218ENST00000515752 NUTM2AQ8IVF1 878 aaPredicted RBP18.43■□□□□ 0.54
SDHA-218ENST00000515752 TNPO1Q92973 898 aaKnown RBP18.43■□□□□ 0.54
SDHA-218ENST00000515752 INTS4Q96HW7 963 aaKnown RBP18.43■□□□□ 0.54
SDHA-218ENST00000515752 SLC4A9Q96Q91 983 aa18.43■□□□□ 0.54
SDHA-218ENST00000515752 TJP1Q07157 1748 aa18.43■□□□□ 0.54
SDHA-218ENST00000515752 CSF1RP07333 972 aa18.42■□□□□ 0.54
SDHA-218ENST00000515752 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
SDHA-218ENST00000515752 KCNB2Q92953 911 aa18.42■□□□□ 0.54
SDHA-218ENST00000515752 TMX3Q96JJ7 454 aa18.42■□□□□ 0.54
SDHA-218ENST00000515752 ARXQ96QS3 562 aa18.42■□□□□ 0.54
SDHA-218ENST00000515752 HAUS7Q99871 368 aa18.42■□□□□ 0.54
SDHA-218ENST00000515752 AKAP2Q9Y2D5 859 aa18.42■□□□□ 0.54
SDHA-218ENST00000515752 CCDC9Q9Y3X0 531 aaKnown RBP18.42■□□□□ 0.54
SDHA-218ENST00000515752 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
SDHA-218ENST00000515752 CUL4AQ13619 759 aa18.41■□□□□ 0.54
SDHA-218ENST00000515752 NLRP10Q86W26 655 aa18.41■□□□□ 0.54
SDHA-218ENST00000515752 TM6SF1Q9BZW5 370 aa18.41■□□□□ 0.54
SDHA-218ENST00000515752 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
SDHA-218ENST00000515752 CEP126Q9P2H0 1117 aa18.41■□□□□ 0.54
SDHA-218ENST00000515752 ZBTB1Q9Y2K1 713 aa18.41■□□□□ 0.54
SDHA-218ENST00000515752 SNX14Q9Y5W7 946 aa18.41■□□□□ 0.54
SDHA-218ENST00000515752 CCDC171Q6TFL3 1326 aa18.41■□□□□ 0.54
SDHA-218ENST00000515752 GOLGA6L22H0YM25 854 aa18.4■□□□□ 0.54
SDHA-218ENST00000515752 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.54
SDHA-218ENST00000515752 RNF20Q5VTR2 975 aa18.39■□□□□ 0.54
SDHA-218ENST00000515752 MARCH10Q8NA82 808 aaPredicted RBP18.39■□□□□ 0.54
SDHA-218ENST00000515752 MAP4K1Q92918 833 aa18.39■□□□□ 0.54
SDHA-218ENST00000515752 AK7Q96M32 723 aa18.39■□□□□ 0.54
SDHA-218ENST00000515752 DBNDD2Q9BQY9 259 aa18.39■□□□□ 0.54
SDHA-218ENST00000515752 NMIQ13287 307 aaPredicted RBP18.39■□□□□ 0.53
SDHA-218ENST00000515752 SKOR2Q2VWA4 1001 aaPredicted RBP18.39■□□□□ 0.53
SDHA-218ENST00000515752 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms