RNA–Protein interactions for RNA: ENST00000515636.1

NEK11-216, Transcript of NIMA related kinase 11, humanhuman

TSL 2

Gene NEK11, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-216ENST00000515636 GPBP1L1Q9HC44 474 aaPredicted RBP14.77□□□□□ -0.05
NEK11-216ENST00000515636 C21orf2O43822 256 aa14.76□□□□□ -0.05
NEK11-216ENST00000515636 PRELPP51888 382 aa14.76□□□□□ -0.05
NEK11-216ENST00000515636 TCIRG1Q13488 830 aa14.76□□□□□ -0.05
NEK11-216ENST00000515636 NLRP10Q86W26 655 aa14.76□□□□□ -0.05
NEK11-216ENST00000515636 RNF181Q9P0P0 153 aa14.76□□□□□ -0.05
NEK11-216ENST00000515636 SNED1Q8TER0 1413 aa14.75□□□□□ -0.05
NEK11-216ENST00000515636 ZC3H4Q9UPT8 1303 aaKnown RBP14.75□□□□□ -0.05
NEK11-216ENST00000515636 CACNA1FO60840 1977 aa14.75□□□□□ -0.05
NEK11-216ENST00000515636 ANKRD13DQ6ZTN6 518 aa14.75□□□□□ -0.05
NEK11-216ENST00000515636 WDR63Q8IWG1 891 aa14.75□□□□□ -0.05
NEK11-216ENST00000515636 UTP14AQ9BVJ6 771 aaKnown RBP14.75□□□□□ -0.05
NEK11-216ENST00000515636 ZNF219Q9P2Y4 722 aaPredicted RBP14.75□□□□□ -0.05
NEK11-216ENST00000515636 SALL2Q9Y467 1007 aaPredicted RBP14.75□□□□□ -0.05
NEK11-216ENST00000515636 LTBP3Q9NS15 1303 aa14.74□□□□□ -0.05
NEK11-216ENST00000515636 LMNB1P20700 586 aa14.74□□□□□ -0.05
NEK11-216ENST00000515636 SOGA3Q5TF21 947 aa14.74□□□□□ -0.05
NEK11-216ENST00000515636 CCDC30Q5VVM6 783 aa14.74□□□□□ -0.05
NEK11-216ENST00000515636 C7orf43Q8WVR3 580 aa14.74□□□□□ -0.05
NEK11-216ENST00000515636 PHAXQ9H814 394 aaKnown RBP14.74□□□□□ -0.05
NEK11-216ENST00000515636 TWISTNBQ3B726 338 aaPredicted RBP14.73□□□□□ -0.05
NEK11-216ENST00000515636 C3orf67Q6ZVT6 689 aa14.73□□□□□ -0.05
NEK11-216ENST00000515636 ISCA1Q9BUE6 129 aa14.73□□□□□ -0.05
NEK11-216ENST00000515636 CHMP4AQ9BY43 222 aa14.73□□□□□ -0.05
NEK11-216ENST00000515636 TAOK3Q9H2K8 898 aa14.73□□□□□ -0.05
NEK11-216ENST00000515636 LRRC37AA6NMS7 1700 aa14.72□□□□□ -0.05
NEK11-216ENST00000515636 SH3TC1Q8TE82 1336 aa14.72□□□□□ -0.05
NEK11-216ENST00000515636 ZNF521Q96K83 1311 aa14.72□□□□□ -0.05
NEK11-216ENST00000515636 HOXA10P31260 410 aaPredicted RBP14.72□□□□□ -0.05
NEK11-216ENST00000515636 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
NEK11-216ENST00000515636 CCDC93Q567U6 631 aa14.72□□□□□ -0.05
NEK11-216ENST00000515636 SLC10A5Q5PT55 438 aa14.72□□□□□ -0.05
NEK11-216ENST00000515636 RPGRQ92834 1020 aaKnown RBP14.72□□□□□ -0.05
NEK11-216ENST00000515636 ALDH1B1P30837 517 aa14.71□□□□□ -0.05
NEK11-216ENST00000515636 C1QTNF8P60827 252 aa14.71□□□□□ -0.05
NEK11-216ENST00000515636 OLFM4Q6UX06 510 aa14.71□□□□□ -0.05
NEK11-216ENST00000515636 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
NEK11-216ENST00000515636 TRMT112Q9UI30 125 aaKnown RBP14.71□□□□□ -0.05
NEK11-216ENST00000515636 TAF1P21675 1872 aa14.71□□□□□ -0.05
NEK11-216ENST00000515636 ATP5J2-PTCD1G3V325 749 aa14.7□□□□□ -0.06
NEK11-216ENST00000515636 KIF3CO14782 793 aa14.7□□□□□ -0.06
NEK11-216ENST00000515636 RIC3Q7Z5B4 369 aa14.7□□□□□ -0.06
NEK11-216ENST00000515636 SYNE4Q8N205 404 aa14.7□□□□□ -0.06
NEK11-216ENST00000515636 ZNF428Q96B54 188 aa14.7□□□□□ -0.06
NEK11-216ENST00000515636 NLRP3Q96P20 1036 aa14.7□□□□□ -0.06
NEK11-216ENST00000515636 STK31Q9BXU1 1019 aa14.7□□□□□ -0.06
NEK11-216ENST00000515636 WDR90Q96KV7 1748 aa14.69□□□□□ -0.06
NEK11-216ENST00000515636 COL4A1P02462 1669 aa14.69□□□□□ -0.06
NEK11-216ENST00000515636 CCER2I3L3R5 266 aa14.69□□□□□ -0.06
NEK11-216ENST00000515636 TCERG1O14776 1098 aaKnown RBP14.69□□□□□ -0.06
NEK11-216ENST00000515636 DDX58O95786 925 aaKnown RBP14.69□□□□□ -0.06
NEK11-216ENST00000515636 HCLS1P14317 486 aaPredicted RBP14.69□□□□□ -0.06
NEK11-216ENST00000515636 TRIM28Q13263 835 aaKnown RBP14.69□□□□□ -0.06
NEK11-216ENST00000515636 CRAMP1Q96RY5 1269 aa14.69□□□□□ -0.06
NEK11-216ENST00000515636 NMRK2Q9NPI5 230 aa14.69□□□□□ -0.06
NEK11-216ENST00000515636 KDM2BQ8NHM5 1336 aa14.68□□□□□ -0.06
NEK11-216ENST00000515636 EXOSC9Q06265 439 aaKnown RBP14.68□□□□□ -0.06
NEK11-216ENST00000515636 RBM17Q96I25 401 aaKnown RBP14.68□□□□□ -0.06
NEK11-216ENST00000515636 MYH16Q9H6N6 1097 aa14.68□□□□□ -0.06
NEK11-216ENST00000515636 MYH3P11055 1940 aa14.68□□□□□ -0.06
NEK11-216ENST00000515636 ABCC4O15439 1325 aa14.67□□□□□ -0.06
NEK11-216ENST00000515636 PPEF1O14829 653 aaPredicted RBP14.67□□□□□ -0.06
NEK11-216ENST00000515636 FKBP4Q02790 459 aaKnown RBP eCLIP14.67□□□□□ -0.06
NEK11-216ENST00000515636 SLC51AQ86UW1 340 aa14.67□□□□□ -0.06
NEK11-216ENST00000515636 RTKN2Q8IZC4 609 aa14.67□□□□□ -0.06
NEK11-216ENST00000515636 FAM89AQ96GI7 184 aa14.67□□□□□ -0.06
NEK11-216ENST00000515636 MYD88Q99836 296 aa14.67□□□□□ -0.06
NEK11-216ENST00000515636 METTL22Q9BUU2 404 aaPredicted RBP14.67□□□□□ -0.06
NEK11-216ENST00000515636 MAP3K2Q9Y2U5 619 aa14.67□□□□□ -0.06
NEK11-216ENST00000515636 COL4A5P29400 1685 aa14.66□□□□□ -0.06
NEK11-216ENST00000515636 VAMP4O75379 141 aa14.66□□□□□ -0.06
NEK11-216ENST00000515636 CC2D2BQ6DHV5 1058 aa14.66□□□□□ -0.06
NEK11-216ENST00000515636 KSR2Q6VAB6 950 aa14.66□□□□□ -0.06
NEK11-216ENST00000515636 G2E3Q7L622 706 aa14.66□□□□□ -0.06
NEK11-216ENST00000515636 LTBP1Q14766 1721 aa14.66□□□□□ -0.06
NEK11-216ENST00000515636 DUOX1Q9NRD9 1551 aa14.65□□□□□ -0.06
NEK11-216ENST00000515636 PI4KAP2A4QPH2 592 aa14.65□□□□□ -0.06
NEK11-216ENST00000515636 SLC4A2P04920 1241 aa14.65□□□□□ -0.06
NEK11-216ENST00000515636 FLIIQ13045 1269 aa14.65□□□□□ -0.06
NEK11-216ENST00000515636 PI4KAP1Q8N8J0 262 aa14.65□□□□□ -0.06
NEK11-216ENST00000515636 ZBTB38Q8NAP3 1195 aaPredicted RBP14.65□□□□□ -0.06
NEK11-216ENST00000515636 CCDC191Q8NCU4 936 aa14.65□□□□□ -0.06
NEK11-216ENST00000515636 PSMD1Q99460 953 aa14.65□□□□□ -0.06
NEK11-216ENST00000515636 GLTPD2A6NH11 291 aa14.64□□□□□ -0.07
NEK11-216ENST00000515636 RTL5Q5HYW3 569 aaPredicted RBP14.64□□□□□ -0.07
NEK11-216ENST00000515636 ZNF277Q9NRM2 450 aaPredicted RBP14.64□□□□□ -0.07
NEK11-216ENST00000515636 CWC25Q9NXE8 425 aaPredicted RBP14.64□□□□□ -0.07
NEK11-216ENST00000515636 IRS4O14654 1257 aaPredicted RBP14.63□□□□□ -0.07
NEK11-216ENST00000515636 IGKV5-2P06315 115 aa14.63□□□□□ -0.07
NEK11-216ENST00000515636 IARSP41252 1262 aaKnown RBP14.63□□□□□ -0.07
NEK11-216ENST00000515636 GRAPQ13588 217 aa14.63□□□□□ -0.07
NEK11-216ENST00000515636 SF3B3Q15393 1217 aaKnown RBP14.63□□□□□ -0.07
NEK11-216ENST00000515636 GRIPAP1Q4V328 841 aa14.63□□□□□ -0.07
NEK11-216ENST00000515636 GRAPLQ8TC17 118 aaPredicted RBP14.63□□□□□ -0.07
NEK11-216ENST00000515636 ATP6V0A2Q9Y487 856 aa14.63□□□□□ -0.07
NEK11-216ENST00000515636 SCN4AP35499 1836 aa14.62□□□□□ -0.07
NEK11-216ENST00000515636 SPEF2Q9C093 1822 aa14.62□□□□□ -0.07
NEK11-216ENST00000515636 PCCAP05165 728 aaPredicted RBP14.62□□□□□ -0.07
NEK11-216ENST00000515636 FKBP5Q13451 457 aaPredicted RBP14.62□□□□□ -0.07
NEK11-216ENST00000515636 DDX46Q7L014 1031 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms