RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 NF2P35240 595 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 SP4Q02446 784 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 SLC26A6Q9BXS9 759 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 CCDC192P0DO97 292 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 DNA2P51530 1060 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 DESP17661 470 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 SYCP3Q8IZU3 236 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 PUF60Q9UHX1 559 aaKnown RBP16.74■□□□□ 0.27
TRIO-222ENST00000515144 CCDC194A0A1B0GVG4 234 aa16.74■□□□□ 0.27
TRIO-222ENST00000515144 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
TRIO-222ENST00000515144 CCDC196A0A1B0GTZ2 297 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 KIAA1328Q86T90 577 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 MAGEB6Q8N7X4 407 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 ZNF526Q8TF50 670 aaPredicted RBP16.73■□□□□ 0.27
TRIO-222ENST00000515144 BICD1Q96G01 975 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 RNF41Q9H4P4 317 aaPredicted RBP16.73■□□□□ 0.27
TRIO-222ENST00000515144 LDHCP07864 332 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 GPR162Q16538 588 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 NAA16Q6N069 864 aaPredicted RBP16.73■□□□□ 0.27
TRIO-222ENST00000515144 AKAP4Q5JQC9 854 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 GSTO1P78417 241 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 TMEM266Q2M3C6 531 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 CWF19L2Q2TBE0 894 aaKnown RBP16.73■□□□□ 0.27
TRIO-222ENST00000515144 MAP3K9P80192 1104 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 ZBTB21Q9ULJ3 1066 aa16.73■□□□□ 0.27
TRIO-222ENST00000515144 CCDC150Q8NCX0 1101 aa16.72■□□□□ 0.27
TRIO-222ENST00000515144 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
TRIO-222ENST00000515144 RAB3GAP1Q15042 981 aa16.72■□□□□ 0.27
TRIO-222ENST00000515144 LMBR1LQ6UX01 489 aa16.72■□□□□ 0.27
TRIO-222ENST00000515144 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
TRIO-222ENST00000515144 GRM8O00222 908 aa16.72■□□□□ 0.27
TRIO-222ENST00000515144 IRS4O14654 1257 aaPredicted RBP16.72■□□□□ 0.27
TRIO-222ENST00000515144 PPP1R12BO60237 982 aaPredicted RBP16.72■□□□□ 0.27
TRIO-222ENST00000515144 SBNO2Q9Y2G9 1366 aa16.72■□□□□ 0.27
TRIO-222ENST00000515144 BAG4O95429 457 aaKnown RBP16.71■□□□□ 0.27
TRIO-222ENST00000515144 USP8P40818 1118 aa16.71■□□□□ 0.27
TRIO-222ENST00000515144 PRIM1P49642 420 aaKnown RBP16.71■□□□□ 0.27
TRIO-222ENST00000515144 MTHFSDQ2M296 383 aaKnown RBP16.71■□□□□ 0.27
TRIO-222ENST00000515144 KRT24Q2M2I5 525 aa16.71■□□□□ 0.27
TRIO-222ENST00000515144 TMX1Q9H3N1 280 aa16.71■□□□□ 0.27
TRIO-222ENST00000515144 CFAP43Q8NDM7 1665 aa16.71■□□□□ 0.27
TRIO-222ENST00000515144 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.27
TRIO-222ENST00000515144 EVI5LQ96CN4 794 aa16.71■□□□□ 0.27
TRIO-222ENST00000515144 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
TRIO-222ENST00000515144 ASXL1Q8IXJ9 1541 aa16.71■□□□□ 0.26
TRIO-222ENST00000515144 ZYXQ15942 572 aaKnown RBP16.7■□□□□ 0.26
TRIO-222ENST00000515144 NUP153P49790 1475 aaKnown RBP16.7■□□□□ 0.26
TRIO-222ENST00000515144 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
TRIO-222ENST00000515144 MEIS3Q99687 375 aa16.7■□□□□ 0.26
TRIO-222ENST00000515144 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRIO-222ENST00000515144 FAM212AQ96EL1 285 aa16.7■□□□□ 0.26
TRIO-222ENST00000515144 FAM193AP78312 1265 aa16.7■□□□□ 0.26
TRIO-222ENST00000515144 CALM1P0DP23 149 aa16.7■□□□□ 0.26
TRIO-222ENST00000515144 CALM2P0DP24 149 aa16.7■□□□□ 0.26
TRIO-222ENST00000515144 CALM3P0DP25 149 aa16.7■□□□□ 0.26
TRIO-222ENST00000515144 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
TRIO-222ENST00000515144 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
TRIO-222ENST00000515144 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRIO-222ENST00000515144 CNBD1Q8NA66 436 aa16.69■□□□□ 0.26
TRIO-222ENST00000515144 NUP62CLQ9H1M0 184 aa16.69■□□□□ 0.26
TRIO-222ENST00000515144 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
TRIO-222ENST00000515144 MBD3O95983 291 aa16.69■□□□□ 0.26
TRIO-222ENST00000515144 KIF5BP33176 963 aa16.69■□□□□ 0.26
TRIO-222ENST00000515144 EIF2AK4Q9P2K8 1649 aaKnown RBP16.69■□□□□ 0.26
TRIO-222ENST00000515144 LUC7LQ9NQ29 371 aaKnown RBP16.69■□□□□ 0.26
TRIO-222ENST00000515144 MACROD2A1Z1Q3 448 aa16.69■□□□□ 0.26
TRIO-222ENST00000515144 CFAP100Q494V2 611 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 FAM182BQ5T319 152 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 FILIP1Q7Z7B0 1213 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 ZSCAN31Q96LW9 406 aaPredicted RBP16.68■□□□□ 0.26
TRIO-222ENST00000515144 MPHOSPH6Q99547 160 aaKnown RBP16.68■□□□□ 0.26
TRIO-222ENST00000515144 TSG101Q99816 390 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 TCERG1LQ5VWI1 586 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 DPH6Q7L8W6 267 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 ZGPATQ8N5A5 531 aaKnown RBP16.68■□□□□ 0.26
TRIO-222ENST00000515144 C8orf58Q8NAV2 365 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 PCDH11XQ9BZA7 1347 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 PCDH11YQ9BZA8 1340 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 TEX35Q5T0J7 233 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 RBM17Q96I25 401 aaKnown RBP16.68■□□□□ 0.26
TRIO-222ENST00000515144 USP16Q9Y5T5 823 aa16.68■□□□□ 0.26
TRIO-222ENST00000515144 HSP90B2PQ58FF3 399 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 RAB34Q9BZG1 259 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 TFIP11Q9UBB9 837 aaKnown RBP16.67■□□□□ 0.26
TRIO-222ENST00000515144 CACNA2D4Q7Z3S7 1137 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 TAX1BP1Q86VP1 789 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 POTEJP0CG39 1038 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 EIF6P56537 245 aaKnown RBP16.67■□□□□ 0.26
TRIO-222ENST00000515144 CDR1P51861 262 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 SLC9C2Q5TAH2 1124 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 ANAPC15P60006 121 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
TRIO-222ENST00000515144 AKNAD1Q5T1N1 836 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 ZNF397Q8NF99 534 aaPredicted RBP16.67■□□□□ 0.26
TRIO-222ENST00000515144 FERMT2Q96AC1 680 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms