RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 CHMP4BQ9H444 224 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-220ENST00000514830 UBN2Q6ZU65 1347 aa15.14■□□□□ 0.01
PDLIM5-220ENST00000514830 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
PDLIM5-220ENST00000514830 AAMPQ13685 434 aa15.13■□□□□ 0.01
PDLIM5-220ENST00000514830 TBC1D9BQ66K14 1250 aa15.13■□□□□ 0.01
PDLIM5-220ENST00000514830 NLRP10Q86W26 655 aa15.13■□□□□ 0.01
PDLIM5-220ENST00000514830 CWC25Q9NXE8 425 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-220ENST00000514830 DDX19BQ9UMR2 479 aa15.13■□□□□ 0.01
PDLIM5-220ENST00000514830 NIP7Q9Y221 180 aaKnown RBP eCLIP15.13■□□□□ 0.01
PDLIM5-220ENST00000514830 DDX60Q8IY21 1712 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-220ENST00000514830 RIC1Q4ADV7 1423 aa15.12■□□□□ 0.01
PDLIM5-220ENST00000514830 ZBTB7AO95365 584 aa15.12■□□□□ 0.01
PDLIM5-220ENST00000514830 NFIXQ14938 502 aa15.12■□□□□ 0.01
PDLIM5-220ENST00000514830 CWF19L2Q2TBE0 894 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-220ENST00000514830 SETDB2Q96T68 719 aa15.12■□□□□ 0.01
PDLIM5-220ENST00000514830 ATP5J2-PTCD1G3V325 749 aa15.11■□□□□ 0.01
PDLIM5-220ENST00000514830 H7C1W4 665 aa15.11■□□□□ 0.01
PDLIM5-220ENST00000514830 ZBTB7BO15156 539 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-220ENST00000514830 PPP1R42Q7Z4L9 355 aa15.11■□□□□ 0.01
PDLIM5-220ENST00000514830 MTFR1LQ9H019 292 aa15.11■□□□□ 0.01
PDLIM5-220ENST00000514830 USP44Q9H0E7 712 aa15.11■□□□□ 0.01
PDLIM5-220ENST00000514830 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-220ENST00000514830 CDHR2Q9BYE9 1310 aa15.11■□□□□ 0.01
PDLIM5-220ENST00000514830 KIF13BQ9NQT8 1826 aa15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 GRM8O00222 908 aa15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 NTSR2O95665 410 aa15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 GNAI3P08754 354 aa15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 CASP7P55210 303 aa15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 ZBTB38Q8NAP3 1195 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 NYXQ9GZU5 481 aa15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 HDAC5Q9UQL6 1122 aa15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 COG6Q9Y2V7 657 aa15.1■□□□□ 0.01
PDLIM5-220ENST00000514830 POLRMTO00411 1230 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-220ENST00000514830 GPTP24298 496 aa15.09■□□□□ 0.01
PDLIM5-220ENST00000514830 SUSD4Q5VX71 490 aa15.09■□□□□ 0.01
PDLIM5-220ENST00000514830 ITPRIPQ8IWB1 547 aa15.09■□□□□ 0.01
PDLIM5-220ENST00000514830 UTP14AQ9BVJ6 771 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-220ENST00000514830 PDGFDQ9GZP0 370 aaPredicted RBP15.09■□□□□ 0.01
PDLIM5-220ENST00000514830 ANKRD31Q8N7Z5 1873 aa15.08■□□□□ 0.01
PDLIM5-220ENST00000514830 HSP90B1P14625 803 aaKnown RBP15.08■□□□□ 0
PDLIM5-220ENST00000514830 DDR1Q08345 913 aa15.08■□□□□ 0
PDLIM5-220ENST00000514830 SLC10A5Q5PT55 438 aa15.08■□□□□ 0
PDLIM5-220ENST00000514830 TPTE2Q6XPS3 522 aa15.08■□□□□ 0
PDLIM5-220ENST00000514830 PLA2G12BQ9BX93 195 aa15.08■□□□□ 0
PDLIM5-220ENST00000514830 ZBTB40Q9NUA8 1239 aa15.08■□□□□ 0
PDLIM5-220ENST00000514830 SH3TC1Q8TE82 1336 aa15.08■□□□□ 0
PDLIM5-220ENST00000514830 ZNF784Q8NCA9 323 aaPredicted RBP15.07■□□□□ 0
PDLIM5-220ENST00000514830 SYT17Q9BSW7 474 aa15.07■□□□□ 0
PDLIM5-220ENST00000514830 C9orf78Q9NZ63 289 aaPredicted RBP15.07■□□□□ 0
PDLIM5-220ENST00000514830 SERPINB2P05120 415 aa15.06■□□□□ 0
PDLIM5-220ENST00000514830 MMP10P09238 476 aa15.06■□□□□ 0
PDLIM5-220ENST00000514830 NBPF7P0C2Y1 421 aaPredicted RBP15.06■□□□□ 0
PDLIM5-220ENST00000514830 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
PDLIM5-220ENST00000514830 NBPF5PQ86XG9 351 aaPredicted RBP15.06■□□□□ 0
PDLIM5-220ENST00000514830 CRBNQ96SW2 442 aa15.06■□□□□ 0
PDLIM5-220ENST00000514830 MEIS3Q99687 375 aa15.06■□□□□ 0
PDLIM5-220ENST00000514830 SGIP1Q9BQI5 828 aa15.06■□□□□ 0
PDLIM5-220ENST00000514830 FHDC1Q9C0D6 1143 aaPredicted RBP15.06■□□□□ 0
PDLIM5-220ENST00000514830 TRMT112Q9UI30 125 aaKnown RBP15.06■□□□□ 0
PDLIM5-220ENST00000514830 UBTFL1P0CB47 393 aaPredicted RBP15.05■□□□□ -0
PDLIM5-220ENST00000514830 BICDL1Q6ZP65 573 aa15.05■□□□□ -0
PDLIM5-220ENST00000514830 UBE3BQ7Z3V4 1068 aa15.05■□□□□ -0
PDLIM5-220ENST00000514830 PARP3Q9Y6F1 533 aa15.05■□□□□ -0
PDLIM5-220ENST00000514830 CHD4Q14839 1912 aa15.05■□□□□ -0
PDLIM5-220ENST00000514830 DLEC1Q9Y238 1755 aa15.04■□□□□ -0
PDLIM5-220ENST00000514830 TNRC6CQ9HCJ0 1690 aaKnown RBP15.04■□□□□ -0
PDLIM5-220ENST00000514830 NEFLP07196 543 aa15.04■□□□□ -0
PDLIM5-220ENST00000514830 PTGER2P43116 358 aa15.04■□□□□ -0
PDLIM5-220ENST00000514830 PRR5LQ6MZQ0 368 aa15.04■□□□□ -0
PDLIM5-220ENST00000514830 CNBD1Q8NA66 436 aa15.04■□□□□ -0
PDLIM5-220ENST00000514830 FAM89AQ96GI7 184 aa15.04■□□□□ -0
PDLIM5-220ENST00000514830 C10orf71Q711Q0 1435 aa15.03■□□□□ -0
PDLIM5-220ENST00000514830 IRS4O14654 1257 aaPredicted RBP15.03■□□□□ -0
PDLIM5-220ENST00000514830 GNAI2P04899 355 aa15.03■□□□□ -0
PDLIM5-220ENST00000514830 POLD1P28340 1107 aa15.03■□□□□ -0
PDLIM5-220ENST00000514830 MTX1Q13505 466 aa15.03■□□□□ -0
PDLIM5-220ENST00000514830 GPR162Q16538 588 aa15.03■□□□□ -0
PDLIM5-220ENST00000514830 RABL6Q3YEC7 729 aaPredicted RBP15.03■□□□□ -0
PDLIM5-220ENST00000514830 MSL1Q68DK7 614 aa15.03■□□□□ -0
PDLIM5-220ENST00000514830 KAZALD1Q96I82 304 aa15.03■□□□□ -0
PDLIM5-220ENST00000514830 RTL9Q8NET4 1388 aa15.02■□□□□ -0
PDLIM5-220ENST00000514830 ABCC12Q96J65 1359 aa15.02■□□□□ -0
PDLIM5-220ENST00000514830 KLRG2A4D1S0 409 aaPredicted RBP15.02■□□□□ -0
PDLIM5-220ENST00000514830 PDE8AO60658 829 aa15.02■□□□□ -0
PDLIM5-220ENST00000514830 ERFEQ4G0M1 354 aa15.02■□□□□ -0
PDLIM5-220ENST00000514830 EXOC6Q8TAG9 804 aa15.02■□□□□ -0
PDLIM5-220ENST00000514830 KIAA1551Q9HCM1 1747 aa15.01□□□□□ -0.01
PDLIM5-220ENST00000514830 CSF1RP07333 972 aa15.01□□□□□ -0.01
PDLIM5-220ENST00000514830 ST5P78524 1137 aa15.01□□□□□ -0.01
PDLIM5-220ENST00000514830 FOXO4P98177 505 aa15.01□□□□□ -0.01
PDLIM5-220ENST00000514830 SF3B3Q15393 1217 aaKnown RBP15.01□□□□□ -0.01
PDLIM5-220ENST00000514830 SUCLG2Q96I99 432 aa15.01□□□□□ -0.01
PDLIM5-220ENST00000514830 BRIP1Q9BX63 1249 aa15.01□□□□□ -0.01
PDLIM5-220ENST00000514830 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
PDLIM5-220ENST00000514830 COL11A2P13942 1736 aaPredicted RBP15□□□□□ -0.01
PDLIM5-220ENST00000514830 GTF2E1P29083 439 aaPredicted RBP15□□□□□ -0.01
PDLIM5-220ENST00000514830 C1QTNF8P60827 252 aa15□□□□□ -0.01
PDLIM5-220ENST00000514830 CRY2Q49AN0 593 aa15□□□□□ -0.01
PDLIM5-220ENST00000514830 NUTM1Q86Y26 1132 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms