RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 NBPF4Q96M43 638 aa12.13□□□□□ -0.47
MATR3-224ENST00000514488 NMRK2Q9NPI5 230 aa12.13□□□□□ -0.47
MATR3-224ENST00000514488 MAP2P11137 1827 aaKnown RBP12.13□□□□□ -0.47
MATR3-224ENST00000514488 DDX11L8A8MPP1 907 aa12.12□□□□□ -0.47
MATR3-224ENST00000514488 TOMM70O94826 608 aa12.12□□□□□ -0.47
MATR3-224ENST00000514488 RDH13Q8NBN7 331 aa12.12□□□□□ -0.47
MATR3-224ENST00000514488 SIN3AQ96ST3 1273 aa12.12□□□□□ -0.47
MATR3-224ENST00000514488 BRCA1P38398 1863 aaKnown RBP12.11□□□□□ -0.47
MATR3-224ENST00000514488 TERF2IPQ9NYB0 399 aa12.11□□□□□ -0.47
MATR3-224ENST00000514488 PXDNLA1KZ92 1463 aa12.1□□□□□ -0.47
MATR3-224ENST00000514488 PKD1L3Q7Z443 1732 aa12.09□□□□□ -0.47
MATR3-224ENST00000514488 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
MATR3-224ENST00000514488 RRS1Q15050 365 aaKnown RBP12.09□□□□□ -0.47
MATR3-224ENST00000514488 LINC00116Q8NCU8 138 aa12.09□□□□□ -0.47
MATR3-224ENST00000514488 NKX2-3Q8TAU0 364 aa12.09□□□□□ -0.47
MATR3-224ENST00000514488 RAPGEF4Q8WZA2 1011 aa12.09□□□□□ -0.47
MATR3-224ENST00000514488 COG3Q96JB2 828 aa12.09□□□□□ -0.47
MATR3-224ENST00000514488 BCS1LQ9Y276 419 aa12.09□□□□□ -0.47
MATR3-224ENST00000514488 ZMYND10O75800 440 aa12.08□□□□□ -0.48
MATR3-224ENST00000514488 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
MATR3-224ENST00000514488 ZC3H15Q8WU90 426 aaKnown RBP12.08□□□□□ -0.48
MATR3-224ENST00000514488 KLRG1Q96E93 195 aa12.08□□□□□ -0.48
MATR3-224ENST00000514488 PCDH11XQ9BZA7 1347 aa12.08□□□□□ -0.48
MATR3-224ENST00000514488 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
MATR3-224ENST00000514488 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
MATR3-224ENST00000514488 A0A0G2JLW4 131 aa12.07□□□□□ -0.48
MATR3-224ENST00000514488 CYP27B1O15528 508 aa12.07□□□□□ -0.48
MATR3-224ENST00000514488 NR1I2O75469 434 aa12.07□□□□□ -0.48
MATR3-224ENST00000514488 MMP10P09238 476 aa12.07□□□□□ -0.48
MATR3-224ENST00000514488 PPP1R18Q6NYC8 613 aa12.07□□□□□ -0.48
MATR3-224ENST00000514488 ARHGAP27Q6ZUM4 889 aa12.07□□□□□ -0.48
MATR3-224ENST00000514488 CGNL1Q0VF96 1302 aa12.07□□□□□ -0.48
MATR3-224ENST00000514488 RTL1A6NKG5 1358 aa12.06□□□□□ -0.48
MATR3-224ENST00000514488 NSD3Q9BZ95 1437 aa12.06□□□□□ -0.48
MATR3-224ENST00000514488 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
MATR3-224ENST00000514488 SSFA2P28290 1259 aa12.06□□□□□ -0.48
MATR3-224ENST00000514488 GCGRP47871 477 aa12.06□□□□□ -0.48
MATR3-224ENST00000514488 TNS4Q8IZW8 715 aa12.06□□□□□ -0.48
MATR3-224ENST00000514488 PIGBQ92521 554 aa12.06□□□□□ -0.48
MATR3-224ENST00000514488 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.06□□□□□ -0.48
MATR3-224ENST00000514488 SBF1O95248 1867 aa12.06□□□□□ -0.48
MATR3-224ENST00000514488 SMG6Q86US8 1419 aaKnown RBP12.05□□□□□ -0.48
MATR3-224ENST00000514488 GGCXP38435 758 aa12.05□□□□□ -0.48
MATR3-224ENST00000514488 MDM2Q00987 491 aaPredicted RBP12.05□□□□□ -0.48
MATR3-224ENST00000514488 ITPK1Q13572 414 aa12.05□□□□□ -0.48
MATR3-224ENST00000514488 C16orf71Q8IYS4 520 aaPredicted RBP12.05□□□□□ -0.48
MATR3-224ENST00000514488 JMYQ8N9B5 988 aa12.05□□□□□ -0.48
MATR3-224ENST00000514488 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
MATR3-224ENST00000514488 CARD11Q9BXL7 1154 aa12.05□□□□□ -0.48
MATR3-224ENST00000514488 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
MATR3-224ENST00000514488 KIF20BQ96Q89 1820 aa12.04□□□□□ -0.48
MATR3-224ENST00000514488 C10orf71Q711Q0 1435 aa12.04□□□□□ -0.48
MATR3-224ENST00000514488 C4AP0C0L4 1744 aa12.04□□□□□ -0.48
MATR3-224ENST00000514488 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
MATR3-224ENST00000514488 DPEP1P16444 411 aa12.04□□□□□ -0.48
MATR3-224ENST00000514488 SIK1P57059 783 aa12.04□□□□□ -0.48
MATR3-224ENST00000514488 HSP90AB2PQ58FF8 381 aa12.04□□□□□ -0.48
MATR3-224ENST00000514488 KRI1Q8N9T8 703 aaKnown RBP12.04□□□□□ -0.48
MATR3-224ENST00000514488 TLL1O43897 1013 aa12.03□□□□□ -0.48
MATR3-224ENST00000514488 CD46P15529 392 aa12.03□□□□□ -0.48
MATR3-224ENST00000514488 HMGB2P26583 209 aaKnown RBP12.03□□□□□ -0.48
MATR3-224ENST00000514488 PRELPP51888 382 aa12.03□□□□□ -0.48
MATR3-224ENST00000514488 C9orf131Q5VYM1 1079 aa12.03□□□□□ -0.48
MATR3-224ENST00000514488 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
MATR3-224ENST00000514488 GGNBP2Q9H3C7 697 aa12.03□□□□□ -0.48
MATR3-224ENST00000514488 TNRC6CQ9HCJ0 1690 aaKnown RBP12.03□□□□□ -0.48
MATR3-224ENST00000514488 CLCN1P35523 988 aa12.02□□□□□ -0.49
MATR3-224ENST00000514488 FUT2Q10981 343 aa12.02□□□□□ -0.49
MATR3-224ENST00000514488 PUS10Q3MIT2 529 aaKnown RBP12.02□□□□□ -0.49
MATR3-224ENST00000514488 GPCPD1Q9NPB8 672 aa12.02□□□□□ -0.49
MATR3-224ENST00000514488 ASAP1Q9ULH1 1129 aa12.02□□□□□ -0.49
MATR3-224ENST00000514488 MYH14Q7Z406 1995 aaKnown RBP12.01□□□□□ -0.49
MATR3-224ENST00000514488 COL5A3P25940 1745 aaPredicted RBP12.01□□□□□ -0.49
MATR3-224ENST00000514488 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
MATR3-224ENST00000514488 TGFB2P61812 414 aa12.01□□□□□ -0.49
MATR3-224ENST00000514488 SCUBE3Q8IX30 993 aa12.01□□□□□ -0.49
MATR3-224ENST00000514488 INSRP06213 1382 aa12.01□□□□□ -0.49
MATR3-224ENST00000514488 CCDC88AQ3V6T2 1871 aa12□□□□□ -0.49
MATR3-224ENST00000514488 ADH1BP00325 375 aa12□□□□□ -0.49
MATR3-224ENST00000514488 FSTL1Q12841 308 aa12□□□□□ -0.49
MATR3-224ENST00000514488 MORN1Q5T089 497 aa12□□□□□ -0.49
MATR3-224ENST00000514488 RRAGCQ9HB90 399 aa12□□□□□ -0.49
MATR3-224ENST00000514488 TMOD3Q9NYL9 352 aa12□□□□□ -0.49
MATR3-224ENST00000514488 FYB1O15117 783 aa11.99□□□□□ -0.49
MATR3-224ENST00000514488 KCNA3P22001 575 aa11.99□□□□□ -0.49
MATR3-224ENST00000514488 TMF1P82094 1093 aa11.99□□□□□ -0.49
MATR3-224ENST00000514488 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
MATR3-224ENST00000514488 FLT4P35916 1363 aa11.98□□□□□ -0.49
MATR3-224ENST00000514488 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
MATR3-224ENST00000514488 TRAPPC3LQ5T215 181 aa11.98□□□□□ -0.49
MATR3-224ENST00000514488 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
MATR3-224ENST00000514488 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
MATR3-224ENST00000514488 CCDC87Q9NVE4 849 aa11.98□□□□□ -0.49
MATR3-224ENST00000514488 RNF181Q9P0P0 153 aa11.98□□□□□ -0.49
MATR3-224ENST00000514488 KDM2BQ8NHM5 1336 aa11.97□□□□□ -0.49
MATR3-224ENST00000514488 HSPA1AP0DMV8 641 aaKnown RBP11.97□□□□□ -0.49
MATR3-224ENST00000514488 HSPA1BP0DMV9 641 aaKnown RBP11.97□□□□□ -0.49
MATR3-224ENST00000514488 GYS1P13807 737 aa11.97□□□□□ -0.49
MATR3-224ENST00000514488 GRIPAP1Q4V328 841 aa11.97□□□□□ -0.49
MATR3-224ENST00000514488 NLGN1Q8N2Q7 840 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms