RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ELOA3B	Q3SY89	546 aa		6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	BTLA	Q7Z6A9	289 aa		6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	ELOA3	Q8NG57	546 aa		6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	TNFRSF25	Q93038	417 aa		6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	NGLY1	Q96IV0	654 aa		6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	TRIM26	Q12899	539 aa	Predicted RBP	6.17	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	SH3PXD2A	Q5TCZ1	1133 aa		6.17	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	SYT9	Q86SS6	491 aa		6.17	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	BTBD6	Q96KE9	485 aa		6.17	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	FAM13B	Q9NYF5	915 aa		6.17	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	ARSD	P51689	593 aa		6.16	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	C11orf91	Q3C1V1	193 aa		6.16	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	CHSY3	Q70JA7	882 aa		6.16	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	PNMA5	Q96PV4	448 aa		6.16	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	SHISA8	B8ZZ34	492 aa		6.15	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	DGKG	P49619	791 aa		6.15	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	CLP1	Q92989	425 aa	Known RBP	6.15	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	HSH2D	Q96JZ2	352 aa		6.15	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	PRDM6	Q9NQX0	595 aa		6.15	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	PCBP4	P57723	403 aa	Known RBP	6.14	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	FCHSD1	Q86WN1	690 aa		6.14	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	STRN4	Q9NRL3	753 aa		6.14	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	CNTNAP5	Q8WYK1	1306 aa		6.14	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	6.13	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	ZBTB7C	A1YPR0	619 aa		6.13	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	GSK3A	P49840	483 aa		6.13	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	SRPK2	P78362	688 aa	Known RBP	6.13	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	SFSWAP	Q12872	951 aa	Known RBP	6.13	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	CCIN	Q13939	588 aa		6.13	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	QTRT2	Q9H974	415 aa	Known RBP	6.13	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	MAP3K6	O95382	1288 aa		6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	BRD2	P25440	801 aa	Known RBP	6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	DGKZ	Q13574	1117 aa		6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	C16orf46	Q6P387	395 aa		6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	ABTB2	Q8N961	1025 aa		6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	ZNF280C	Q8ND82	737 aa		6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	DCAF5	Q96JK2	942 aa		6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	CXXC1	Q9P0U4	656 aa	Predicted RBP	6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	ZMIZ1	Q9ULJ6	1067 aa		6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	MTMR7	Q9Y216	660 aa		6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	6.12	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	INPP5B	P32019	993 aa		6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	ADH7	P40394	386 aa		6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	IDH3A	P50213	366 aa		6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	SNRPN	P63162	240 aa	Known RBP	6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	CDCA8	Q53HL2	280 aa		6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	PRRT3	Q5FWE3	981 aa		6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	B4GALNT3	Q6L9W6	998 aa		6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	LINC00114	Q6XXX2	140 aa		6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	MDFI	Q99750	246 aa		6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	TRAIP	Q9BWF2	469 aa		6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	UBE2O	Q9C0C9	1292 aa	Known RBP	6.11	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	PRMT3	O60678	531 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	MICAL2	O94851	1124 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	EGFR	P00533	1210 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	RPLP1	P05386	114 aa	Known RBP	6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	SPATA31C1	P0DKV0	1188 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	PDE4C	Q08493	712 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	OCLN	Q16625	522 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	KCTD17	Q8N5Z5	321 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	STK32A	Q8WU08	396 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	BHMT	Q93088	406 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	IFT43	Q96FT9	208 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	NACC1	Q96RE7	527 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	SLC30A3	Q99726	388 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	DMGDH	Q9UI17	866 aa	Known RBP	6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	KLF15	Q9UIH9	416 aa		6.1	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	MSTN	O14793	375 aa		6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	LILRB5	O75023	590 aa		6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	FAM69C	Q0P6D2	419 aa		6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	FKBP5	Q13451	457 aa	Predicted RBP	6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	GRIN2C	Q14957	1233 aa		6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	TMEM164	Q5U3C3	297 aa		6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	DCAF11	Q8TEB1	546 aa		6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	GSX2	Q9BZM3	304 aa		6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	KLK14	Q9P0G3	267 aa		6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.09	□□□□□ -1.43
CALCOCO2-223	ENST00000514267	PIK3R5	Q8WYR1	880 aa		6.08	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	FRRS1L	Q9P0K9	344 aa		6.08	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	HCN2	Q9UL51	889 aa		6.08	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	BCS1L	Q9Y276	419 aa		6.08	□□□□□ -1.44
CALCOCO2-223	ENST00000514267		M0R082	166 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	HOXB4	P17483	251 aa	Predicted RBP	6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	NFKB1	P19838	968 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	ATP2B4	P23634	1241 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	PLA2G4E	Q3MJ16	856 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	GPAT2	Q6NUI2	795 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	TREML1	Q86YW5	311 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	CACTIN-AS1	Q8N1I8	211 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	ZNF417	Q8TAU3	575 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	PRIMPOL	Q96LW4	560 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	ZNF587	Q96SQ5	575 aa	Predicted RBP	6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	RBSN	Q9H1K0	784 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	SLC6A14	Q9UN76	642 aa		6.07	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	HOXD8	P13378	290 aa	Predicted RBP	6.06	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	PCSK2	P16519	638 aa		6.06	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	SOX18	P35713	384 aa		6.06	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	NRL	P54845	237 aa		6.06	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	RAC1	P63000	192 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms