RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
SH3D19-209ENST00000514013 TBC1D9BQ66K14 1250 aa12.5□□□□□ -0.41
SH3D19-209ENST00000514013 PRR5LQ6MZQ0 368 aa12.5□□□□□ -0.41
SH3D19-209ENST00000514013 SLC52A2Q9HAB3 445 aa12.5□□□□□ -0.41
SH3D19-209ENST00000514013 FER1L6Q2WGJ9 1857 aa12.5□□□□□ -0.41
SH3D19-209ENST00000514013 MRC1P22897 1456 aa12.49□□□□□ -0.41
SH3D19-209ENST00000514013 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
SH3D19-209ENST00000514013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.48□□□□□ -0.41
SH3D19-209ENST00000514013 RASSF10A6NK89 507 aa12.48□□□□□ -0.41
SH3D19-209ENST00000514013 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
SH3D19-209ENST00000514013 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
SH3D19-209ENST00000514013 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
SH3D19-209ENST00000514013 BRIP1Q9BX63 1249 aa12.48□□□□□ -0.41
SH3D19-209ENST00000514013 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
SH3D19-209ENST00000514013 DICER1Q9UPY3 1922 aaKnown RBP12.47□□□□□ -0.41
SH3D19-209ENST00000514013 EIF5P55010 431 aaKnown RBP12.47□□□□□ -0.41
SH3D19-209ENST00000514013 PRPF40BQ6NWY9 871 aaKnown RBP12.47□□□□□ -0.41
SH3D19-209ENST00000514013 ADAMTSL1Q8N6G6 1762 aa12.47□□□□□ -0.41
SH3D19-209ENST00000514013 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.41
SH3D19-209ENST00000514013 IQCA1LA6NCM1 817 aa12.46□□□□□ -0.41
SH3D19-209ENST00000514013 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
SH3D19-209ENST00000514013 RGS19P49795 217 aa12.46□□□□□ -0.41
SH3D19-209ENST00000514013 MLLT1Q03111 559 aaPredicted RBP12.46□□□□□ -0.41
SH3D19-209ENST00000514013 FMR1Q06787 632 aaKnown RBP eCLIP12.46□□□□□ -0.41
SH3D19-209ENST00000514013 EAPPQ56P03 285 aaPredicted RBP12.46□□□□□ -0.41
SH3D19-209ENST00000514013 MAP1SQ66K74 1059 aaPredicted RBP12.46□□□□□ -0.41
SH3D19-209ENST00000514013 RNF25Q96BH1 459 aaPredicted RBP12.46□□□□□ -0.41
SH3D19-209ENST00000514013 SLX4Q8IY92 1834 aa12.46□□□□□ -0.42
SH3D19-209ENST00000514013 WDR33Q9C0J8 1336 aaKnown RBP12.45□□□□□ -0.42
SH3D19-209ENST00000514013 RNMTO43148 476 aaKnown RBP12.45□□□□□ -0.42
SH3D19-209ENST00000514013 PDE6BP35913 854 aa12.45□□□□□ -0.42
SH3D19-209ENST00000514013 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
SH3D19-209ENST00000514013 OLFM4Q6UX06 510 aa12.45□□□□□ -0.42
SH3D19-209ENST00000514013 C7orf43Q8WVR3 580 aa12.45□□□□□ -0.42
SH3D19-209ENST00000514013 SRGNP10124 158 aa12.44□□□□□ -0.42
SH3D19-209ENST00000514013 IL13P35225 146 aa12.44□□□□□ -0.42
SH3D19-209ENST00000514013 DEFB115Q30KQ5 88 aa12.44□□□□□ -0.42
SH3D19-209ENST00000514013 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
SH3D19-209ENST00000514013 TSKSQ9UJT2 592 aa12.44□□□□□ -0.42
SH3D19-209ENST00000514013 TBC1D2BQ9UPU7 963 aa12.44□□□□□ -0.42
SH3D19-209ENST00000514013 SCN7AQ01118 1682 aa12.44□□□□□ -0.42
SH3D19-209ENST00000514013 RNF123Q5XPI4 1314 aa12.43□□□□□ -0.42
SH3D19-209ENST00000514013 EPHX2P34913 555 aa12.43□□□□□ -0.42
SH3D19-209ENST00000514013 STYK1Q6J9G0 422 aa12.43□□□□□ -0.42
SH3D19-209ENST00000514013 CNTROBQ8N137 903 aa12.43□□□□□ -0.42
SH3D19-209ENST00000514013 ZNF277Q9NRM2 450 aaPredicted RBP12.43□□□□□ -0.42
SH3D19-209ENST00000514013 HACL1Q9UJ83 578 aa12.43□□□□□ -0.42
SH3D19-209ENST00000514013 THSD7BQ9C0I4 1608 aa12.43□□□□□ -0.42
SH3D19-209ENST00000514013 MAP2K1Q02750 393 aaPredicted RBP12.42□□□□□ -0.42
SH3D19-209ENST00000514013 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
SH3D19-209ENST00000514013 CNKSR1Q969H4 720 aa12.42□□□□□ -0.42
SH3D19-209ENST00000514013 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
SH3D19-209ENST00000514013 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
SH3D19-209ENST00000514013 SCN4AP35499 1836 aa12.41□□□□□ -0.42
SH3D19-209ENST00000514013 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
SH3D19-209ENST00000514013 CNBD1Q8NA66 436 aa12.41□□□□□ -0.42
SH3D19-209ENST00000514013 ZNF496Q96IT1 587 aaPredicted RBP12.41□□□□□ -0.42
SH3D19-209ENST00000514013 POLR3GLQ9BT43 218 aa12.41□□□□□ -0.42
SH3D19-209ENST00000514013 ABT1Q9ULW3 272 aaKnown RBP12.41□□□□□ -0.42
SH3D19-209ENST00000514013 ZNF330Q9Y3S2 320 aaPredicted RBP12.41□□□□□ -0.42
SH3D19-209ENST00000514013 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
SH3D19-209ENST00000514013 CAMTA2O94983 1202 aa12.4□□□□□ -0.42
SH3D19-209ENST00000514013 MTHFSDQ2M296 383 aaKnown RBP12.4□□□□□ -0.42
SH3D19-209ENST00000514013 CYP4F22Q6NT55 531 aa12.4□□□□□ -0.42
SH3D19-209ENST00000514013 MASTLQ96GX5 879 aa12.4□□□□□ -0.42
SH3D19-209ENST00000514013 CAPNS2Q96L46 248 aa12.4□□□□□ -0.42
SH3D19-209ENST00000514013 DDX21Q9NR30 783 aaKnown RBP eCLIP12.4□□□□□ -0.42
SH3D19-209ENST00000514013 COL4A5P29400 1685 aa12.4□□□□□ -0.42
SH3D19-209ENST00000514013 LTBP1Q14766 1721 aa12.4□□□□□ -0.43
SH3D19-209ENST00000514013 PDE4DIPQ5VU43 2346 aa12.39□□□□□ -0.43
SH3D19-209ENST00000514013 A0A087WZG4 1122 aa12.39□□□□□ -0.43
SH3D19-209ENST00000514013 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
SH3D19-209ENST00000514013 HMOX1P09601 288 aa12.39□□□□□ -0.43
SH3D19-209ENST00000514013 FKBP4Q02790 459 aaKnown RBP eCLIP12.39□□□□□ -0.43
SH3D19-209ENST00000514013 GRM1Q13255 1194 aa12.39□□□□□ -0.43
SH3D19-209ENST00000514013 CCDC93Q567U6 631 aa12.39□□□□□ -0.43
SH3D19-209ENST00000514013 SOGA3Q5TF21 947 aa12.39□□□□□ -0.43
SH3D19-209ENST00000514013 SLC51AQ86UW1 340 aa12.39□□□□□ -0.43
SH3D19-209ENST00000514013 PANK3Q9H999 370 aa12.39□□□□□ -0.43
SH3D19-209ENST00000514013 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 FZD9O00144 591 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 TRAF5O00463 557 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 AOC2O75106 756 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 STARD3NLO95772 234 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 A1BGP04217 495 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.438e-10■■□□□ 13.7
SH3D19-209ENST00000514013 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
SH3D19-209ENST00000514013 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 MCOLN1Q9GZU1 580 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 HEG1Q9ULI3 1381 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 CACNA1SQ13698 1873 aa12.38□□□□□ -0.43
SH3D19-209ENST00000514013 IL6STP40189 918 aaPredicted RBP12.37□□□□□ -0.43
SH3D19-209ENST00000514013 PIP4K2AP48426 406 aaPredicted RBP12.37□□□□□ -0.43
SH3D19-209ENST00000514013 ST5P78524 1137 aa12.37□□□□□ -0.43
SH3D19-209ENST00000514013 CST9Q5W186 159 aa12.37□□□□□ -0.43
SH3D19-209ENST00000514013 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
SH3D19-209ENST00000514013 PNMA8AQ86V59 439 aaPredicted RBP12.37□□□□□ -0.43
SH3D19-209ENST00000514013 MORC1Q86VD1 984 aa12.37□□□□□ -0.43
SH3D19-209ENST00000514013 KLRG2A4D1S0 409 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms