RNA–Protein interactions for RNA: ENST00000513821.5

SGCA-209, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,090 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-209ENST00000513821 TWISTNBQ3B726 338 aaPredicted RBP17.81■□□□□ 0.44
SGCA-209ENST00000513821 CRY2Q49AN0 593 aa17.81■□□□□ 0.44
SGCA-209ENST00000513821 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
SGCA-209ENST00000513821 RPGRQ92834 1020 aaKnown RBP17.81■□□□□ 0.44
SGCA-209ENST00000513821 RBM17Q96I25 401 aaKnown RBP17.81■□□□□ 0.44
SGCA-209ENST00000513821 ZNF219Q9P2Y4 722 aaPredicted RBP17.81■□□□□ 0.44
SGCA-209ENST00000513821 TRMT112Q9UI30 125 aaKnown RBP17.81■□□□□ 0.44
SGCA-209ENST00000513821 HOXA10P31260 410 aaPredicted RBP17.8■□□□□ 0.44
SGCA-209ENST00000513821 MYH16Q9H6N6 1097 aa17.8■□□□□ 0.44
SGCA-209ENST00000513821 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
SGCA-209ENST00000513821 DLEC1Q9Y238 1755 aa17.79■□□□□ 0.44
SGCA-209ENST00000513821 CC2D2BQ6DHV5 1058 aa17.79■□□□□ 0.44
SGCA-209ENST00000513821 RTKN2Q8IZC4 609 aa17.79■□□□□ 0.44
SGCA-209ENST00000513821 ZNF526Q8TF50 670 aaPredicted RBP17.79■□□□□ 0.44
SGCA-209ENST00000513821 C7orf43Q8WVR3 580 aa17.79■□□□□ 0.44
SGCA-209ENST00000513821 CRAMP1Q96RY5 1269 aa17.79■□□□□ 0.44
SGCA-209ENST00000513821 ISCA1Q9BUE6 129 aa17.79■□□□□ 0.44
SGCA-209ENST00000513821 SH3TC1Q8TE82 1336 aa17.78■□□□□ 0.44
SGCA-209ENST00000513821 ZC3H4Q9UPT8 1303 aaKnown RBP17.78■□□□□ 0.44
SGCA-209ENST00000513821 HSP90B1P14625 803 aaKnown RBP17.78■□□□□ 0.44
SGCA-209ENST00000513821 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
SGCA-209ENST00000513821 CCDC93Q567U6 631 aa17.78■□□□□ 0.44
SGCA-209ENST00000513821 TMX4Q9H1E5 349 aaPredicted RBP17.78■□□□□ 0.44
SGCA-209ENST00000513821 RIC1Q4ADV7 1423 aa17.78■□□□□ 0.44
SGCA-209ENST00000513821 LTBP3Q9NS15 1303 aa17.77■□□□□ 0.44
SGCA-209ENST00000513821 NFKBIEO00221 500 aa17.77■□□□□ 0.44
SGCA-209ENST00000513821 RASSF7Q02833 373 aa17.77■□□□□ 0.44
SGCA-209ENST00000513821 TAOK3Q9H2K8 898 aa17.77■□□□□ 0.44
SGCA-209ENST00000513821 KDM2BQ8NHM5 1336 aa17.76■□□□□ 0.43
SGCA-209ENST00000513821 ATP5J2-PTCD1G3V325 749 aa17.76■□□□□ 0.43
SGCA-209ENST00000513821 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
SGCA-209ENST00000513821 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
SGCA-209ENST00000513821 FANCIQ9NVI1 1328 aa17.75■□□□□ 0.43
SGCA-209ENST00000513821 VAMP4O75379 141 aa17.75■□□□□ 0.43
SGCA-209ENST00000513821 BBOX1O75936 387 aa17.75■□□□□ 0.43
SGCA-209ENST00000513821 C1QTNF8P60827 252 aa17.75■□□□□ 0.43
SGCA-209ENST00000513821 EXOSC9Q06265 439 aaKnown RBP17.75■□□□□ 0.43
SGCA-209ENST00000513821 DPY19L2Q6NUT2 758 aa17.75■□□□□ 0.43
SGCA-209ENST00000513821 KSR2Q6VAB6 950 aa17.75■□□□□ 0.43
SGCA-209ENST00000513821 CCDC191Q8NCU4 936 aa17.75■□□□□ 0.43
SGCA-209ENST00000513821 METTL22Q9BUU2 404 aaPredicted RBP17.75■□□□□ 0.43
SGCA-209ENST00000513821 HCLS1P14317 486 aaPredicted RBP17.74■□□□□ 0.43
SGCA-209ENST00000513821 SLX4Q8IY92 1834 aa17.74■□□□□ 0.43
SGCA-209ENST00000513821 FKBP4Q02790 459 aaKnown RBP eCLIP17.73■□□□□ 0.43
SGCA-209ENST00000513821 NEXNQ0ZGT2 675 aa17.73■□□□□ 0.43
SGCA-209ENST00000513821 DDX46Q7L014 1031 aaKnown RBP17.73■□□□□ 0.43
SGCA-209ENST00000513821 FAM89AQ96GI7 184 aa17.73■□□□□ 0.43
SGCA-209ENST00000513821 MYD88Q99836 296 aa17.73■□□□□ 0.43
SGCA-209ENST00000513821 SBF1O95248 1867 aa17.73■□□□□ 0.43
SGCA-209ENST00000513821 PI4KAP2A4QPH2 592 aa17.72■□□□□ 0.43
SGCA-209ENST00000513821 GLTPD2A6NH11 291 aa17.72■□□□□ 0.43
SGCA-209ENST00000513821 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
SGCA-209ENST00000513821 SYNE4Q8N205 404 aa17.72■□□□□ 0.43
SGCA-209ENST00000513821 PI4KAP1Q8N8J0 262 aa17.72■□□□□ 0.43
SGCA-209ENST00000513821 ZBTB38Q8NAP3 1195 aaPredicted RBP17.72■□□□□ 0.43
SGCA-209ENST00000513821 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
SGCA-209ENST00000513821 COL11A2P13942 1736 aaPredicted RBP17.72■□□□□ 0.43
SGCA-209ENST00000513821 PRELPP51888 382 aa17.71■□□□□ 0.43
SGCA-209ENST00000513821 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
SGCA-209ENST00000513821 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
SGCA-209ENST00000513821 IRS4O14654 1257 aaPredicted RBP17.7■□□□□ 0.42
SGCA-209ENST00000513821 PPEF1O14829 653 aaPredicted RBP17.7■□□□□ 0.42
SGCA-209ENST00000513821 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
SGCA-209ENST00000513821 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
SGCA-209ENST00000513821 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
SGCA-209ENST00000513821 C3orf67Q6ZVT6 689 aa17.7■□□□□ 0.42
SGCA-209ENST00000513821 TMC4Q7Z404 712 aa17.7■□□□□ 0.42
SGCA-209ENST00000513821 PSMD1Q99460 953 aa17.7■□□□□ 0.42
SGCA-209ENST00000513821 ZNF521Q96K83 1311 aa17.7■□□□□ 0.42
SGCA-209ENST00000513821 E9PSI1 815 aa17.69■□□□□ 0.42
SGCA-209ENST00000513821 KIF3CO14782 793 aa17.69■□□□□ 0.42
SGCA-209ENST00000513821 FLIIQ13045 1269 aa17.69■□□□□ 0.42
SGCA-209ENST00000513821 SP8Q8IXZ3 490 aa17.69■□□□□ 0.42
SGCA-209ENST00000513821 C16orf71Q8IYS4 520 aaPredicted RBP17.69■□□□□ 0.42
SGCA-209ENST00000513821 ATP6V0A2Q9Y487 856 aa17.69■□□□□ 0.42
SGCA-209ENST00000513821 FER1L6Q2WGJ9 1857 aa17.69■□□□□ 0.42
SGCA-209ENST00000513821 ANKRD36CQ5JPF3 1778 aa17.68■□□□□ 0.42
SGCA-209ENST00000513821 GRAPQ13588 217 aa17.68■□□□□ 0.42
SGCA-209ENST00000513821 G2E3Q7L622 706 aa17.68■□□□□ 0.42
SGCA-209ENST00000513821 GRAPLQ8TC17 118 aaPredicted RBP17.68■□□□□ 0.42
SGCA-209ENST00000513821 VPS33BQ9H267 617 aa17.68■□□□□ 0.42
SGCA-209ENST00000513821 RRAGCQ9HB90 399 aa17.68■□□□□ 0.42
SGCA-209ENST00000513821 NMRK2Q9NPI5 230 aa17.68■□□□□ 0.42
SGCA-209ENST00000513821 ARFGEF2Q9Y6D5 1785 aa17.67■□□□□ 0.42
SGCA-209ENST00000513821 TOMM70O94826 608 aa17.67■□□□□ 0.42
SGCA-209ENST00000513821 VEGFAP15692 232 aaPredicted RBP17.67■□□□□ 0.42
SGCA-209ENST00000513821 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
SGCA-209ENST00000513821 RTL5Q5HYW3 569 aaPredicted RBP17.67■□□□□ 0.42
SGCA-209ENST00000513821 OLFM4Q6UX06 510 aa17.67■□□□□ 0.42
SGCA-209ENST00000513821 SUPT20HQ8NEM7 779 aa17.67■□□□□ 0.42
SGCA-209ENST00000513821 JDP2Q8WYK2 163 aa17.67■□□□□ 0.42
SGCA-209ENST00000513821 ZNF277Q9NRM2 450 aaPredicted RBP17.67■□□□□ 0.42
SGCA-209ENST00000513821 ABCC4O15439 1325 aa17.67■□□□□ 0.42
SGCA-209ENST00000513821 CCDC88AQ3V6T2 1871 aa17.67■□□□□ 0.42
SGCA-209ENST00000513821 CACNA1FO60840 1977 aa17.66■□□□□ 0.42
SGCA-209ENST00000513821 PDE8AO60658 829 aa17.66■□□□□ 0.42
SGCA-209ENST00000513821 IARSP41252 1262 aaKnown RBP17.66■□□□□ 0.42
SGCA-209ENST00000513821 ZNF428Q96B54 188 aa17.66■□□□□ 0.42
SGCA-209ENST00000513821 IGKV5-2P06315 115 aa17.65■□□□□ 0.42
SGCA-209ENST00000513821 SLFN5Q08AF3 891 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms