RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 ERFEQ4G0M1 354 aa14.4□□□□□ -0.1
HTT-213ENST00000513806 BEND3Q5T5X7 828 aa14.4□□□□□ -0.1
HTT-213ENST00000513806 C20orf194Q5TEA3 1177 aa14.4□□□□□ -0.1
HTT-213ENST00000513806 NBPF5PQ86XG9 351 aaPredicted RBP14.4□□□□□ -0.1
HTT-213ENST00000513806 PPP1R1BQ9UD71 204 aaPredicted RBP14.4□□□□□ -0.1
HTT-213ENST00000513806 MYH3P11055 1940 aa14.39□□□□□ -0.11
HTT-213ENST00000513806 HSP90AB3PQ58FF7 597 aa14.39□□□□□ -0.11
HTT-213ENST00000513806 ZKSCAN2Q63HK3 967 aa14.39□□□□□ -0.11
HTT-213ENST00000513806 PRR5LQ6MZQ0 368 aa14.39□□□□□ -0.11
HTT-213ENST00000513806 ATF7IPQ6VMQ6 1270 aa14.39□□□□□ -0.11
HTT-213ENST00000513806 PANK1Q8TE04 598 aa14.39□□□□□ -0.11
HTT-213ENST00000513806 SRCAPQ6ZRS2 3230 aa14.38□□□□□ -0.11
HTT-213ENST00000513806 NPHP1O15259 732 aa14.38□□□□□ -0.11
HTT-213ENST00000513806 NEXNQ0ZGT2 675 aa14.38□□□□□ -0.11
HTT-213ENST00000513806 TMEM57Q8N5G2 664 aa14.38□□□□□ -0.11
HTT-213ENST00000513806 FAM89AQ96GI7 184 aa14.38□□□□□ -0.11
HTT-213ENST00000513806 API5Q9BZZ5 524 aaKnown RBP14.38□□□□□ -0.11
HTT-213ENST00000513806 CWC25Q9NXE8 425 aaPredicted RBP14.38□□□□□ -0.11
HTT-213ENST00000513806 TRMT112Q9UI30 125 aaKnown RBP14.38□□□□□ -0.11
HTT-213ENST00000513806 WWC3Q9ULE0 1092 aa14.38□□□□□ -0.11
HTT-213ENST00000513806 ABCC4O15439 1325 aa14.38□□□□□ -0.11
HTT-213ENST00000513806 HCLS1P14317 486 aaPredicted RBP14.37□□□□□ -0.11
HTT-213ENST00000513806 C3orf67Q6ZVT6 689 aa14.37□□□□□ -0.11
HTT-213ENST00000513806 CNBD1Q8NA66 436 aa14.37□□□□□ -0.11
HTT-213ENST00000513806 LINS1Q8NG48 757 aa14.37□□□□□ -0.11
HTT-213ENST00000513806 UTP14AQ9BVJ6 771 aaKnown RBP14.37□□□□□ -0.11
HTT-213ENST00000513806 PXDNLA1KZ92 1463 aa14.37□□□□□ -0.11
HTT-213ENST00000513806 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 C10orf71Q711Q0 1435 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 RGL2O15211 777 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 IPO8O15397 1037 aaKnown RBP14.36□□□□□ -0.11
HTT-213ENST00000513806 GTF2E1P29083 439 aaPredicted RBP14.36□□□□□ -0.11
HTT-213ENST00000513806 GCKRQ14397 625 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 PARP10Q53GL7 1025 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 PPP1R42Q7Z4L9 355 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 CCDC191Q8NCU4 936 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 NLGN2Q8NFZ4 835 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 ARHGAP45Q92619 1136 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 SRCIN1Q9C0H9 1055 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 SUPT16HQ9Y5B9 1047 aaKnown RBP14.36□□□□□ -0.11
HTT-213ENST00000513806 COL4A1P02462 1669 aa14.36□□□□□ -0.11
HTT-213ENST00000513806 RRP1P56182 461 aaKnown RBP14.35□□□□□ -0.11
HTT-213ENST00000513806 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
HTT-213ENST00000513806 DZIP1LQ8IYY4 767 aaKnown RBP14.35□□□□□ -0.11
HTT-213ENST00000513806 FHDC1Q9C0D6 1143 aaPredicted RBP14.35□□□□□ -0.11
HTT-213ENST00000513806 DLEC1Q9Y238 1755 aa14.34□□□□□ -0.11
HTT-213ENST00000513806 BRCA1P38398 1863 aaKnown RBP14.34□□□□□ -0.11
HTT-213ENST00000513806 CHRNA5P30532 468 aa14.34□□□□□ -0.11
HTT-213ENST00000513806 TRIM28Q13263 835 aaKnown RBP14.34□□□□□ -0.11
HTT-213ENST00000513806 TPTE2Q6XPS3 522 aa14.34□□□□□ -0.11
HTT-213ENST00000513806 FTSJ3Q8IY81 847 aaKnown RBP14.34□□□□□ -0.11
HTT-213ENST00000513806 CCDC85AQ96PX6 553 aaPredicted RBP14.34□□□□□ -0.11
HTT-213ENST00000513806 IRS4O14654 1257 aaPredicted RBP14.33□□□□□ -0.12
HTT-213ENST00000513806 NBPF7P0C2Y1 421 aaPredicted RBP14.33□□□□□ -0.12
HTT-213ENST00000513806 CASP7P55210 303 aa14.33□□□□□ -0.12
HTT-213ENST00000513806 IRX6P78412 446 aaPredicted RBP14.33□□□□□ -0.12
HTT-213ENST00000513806 ST5P78524 1137 aa14.33□□□□□ -0.12
HTT-213ENST00000513806 ZBTB38Q8NAP3 1195 aaPredicted RBP14.33□□□□□ -0.12
HTT-213ENST00000513806 NYXQ9GZU5 481 aa14.33□□□□□ -0.12
HTT-213ENST00000513806 COG6Q9Y2V7 657 aa14.33□□□□□ -0.12
HTT-213ENST00000513806 SH3TC1Q8TE82 1336 aa14.33□□□□□ -0.12
HTT-213ENST00000513806 IBTKQ9P2D0 1353 aaPredicted RBP14.33□□□□□ -0.12
HTT-213ENST00000513806 A0A0G2JLW4 131 aa14.32□□□□□ -0.12
HTT-213ENST00000513806 H7C1W4 665 aa14.32□□□□□ -0.12
HTT-213ENST00000513806 ALDH1L1O75891 902 aa14.32□□□□□ -0.12
HTT-213ENST00000513806 PCCAP05165 728 aaPredicted RBP14.32□□□□□ -0.12
HTT-213ENST00000513806 CCT4P50991 539 aaKnown RBP14.32□□□□□ -0.12
HTT-213ENST00000513806 EPHA10Q5JZY3 1008 aa14.32□□□□□ -0.12
HTT-213ENST00000513806 INTS3Q68E01 1043 aaKnown RBP14.32□□□□□ -0.12
HTT-213ENST00000513806 SLC51AQ86UW1 340 aa14.32□□□□□ -0.12
HTT-213ENST00000513806 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
HTT-213ENST00000513806 MEIS3Q99687 375 aa14.32□□□□□ -0.12
HTT-213ENST00000513806 USP44Q9H0E7 712 aa14.32□□□□□ -0.12
HTT-213ENST00000513806 C9orf78Q9NZ63 289 aaPredicted RBP14.32□□□□□ -0.12
HTT-213ENST00000513806 GRM8O00222 908 aa14.31□□□□□ -0.12
HTT-213ENST00000513806 DPEP1P16444 411 aa14.31□□□□□ -0.12
HTT-213ENST00000513806 SUCLG2Q96I99 432 aa14.31□□□□□ -0.12
HTT-213ENST00000513806 SLX4Q8IY92 1834 aa14.31□□□□□ -0.12
HTT-213ENST00000513806 C2CD5Q86YS7 1000 aa14.3□□□□□ -0.12
HTT-213ENST00000513806 KAZALD1Q96I82 304 aa14.3□□□□□ -0.12
HTT-213ENST00000513806 SYT17Q9BSW7 474 aa14.3□□□□□ -0.12
HTT-213ENST00000513806 BRIP1Q9BX63 1249 aa14.3□□□□□ -0.12
HTT-213ENST00000513806 C1orf115Q9H7X2 142 aa14.3□□□□□ -0.12
HTT-213ENST00000513806 SLC10A5Q5PT55 438 aa14.29□□□□□ -0.12
HTT-213ENST00000513806 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.29□□□□□ -0.12
HTT-213ENST00000513806 KCNA3P22001 575 aa14.28□□□□□ -0.12
HTT-213ENST00000513806 RNF123Q5XPI4 1314 aa14.28□□□□□ -0.12
HTT-213ENST00000513806 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
HTT-213ENST00000513806 CRBNQ96SW2 442 aa14.28□□□□□ -0.12
HTT-213ENST00000513806 CDHR2Q9BYE9 1310 aa14.28□□□□□ -0.12
HTT-213ENST00000513806 CD2APQ9Y5K6 639 aa14.28□□□□□ -0.12
HTT-213ENST00000513806 UTYO14607 1347 aa14.27□□□□□ -0.12
HTT-213ENST00000513806 PDE8AO60658 829 aa14.27□□□□□ -0.13
HTT-213ENST00000513806 PDE6BP35913 854 aa14.27□□□□□ -0.13
HTT-213ENST00000513806 FOXO4P98177 505 aa14.27□□□□□ -0.13
HTT-213ENST00000513806 MVPQ14764 893 aaKnown RBP14.27□□□□□ -0.13
HTT-213ENST00000513806 NLRP3Q96P20 1036 aa14.27□□□□□ -0.13
HTT-213ENST00000513806 BICC1Q9H694 974 aaKnown RBP14.27□□□□□ -0.13
HTT-213ENST00000513806 SEC31BQ9NQW1 1179 aa14.27□□□□□ -0.13
HTT-213ENST00000513806 ZNF219Q9P2Y4 722 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms