RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 NPM2Q86SE8 214 aaKnown RBP16.43■□□□□ 0.22
SFXN1-210ENST00000513725 USP48Q86UV5 1035 aa16.43■□□□□ 0.22
SFXN1-210ENST00000513725 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
SFXN1-210ENST00000513725 NIM1KQ8IY84 436 aa16.43■□□□□ 0.22
SFXN1-210ENST00000513725 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
SFXN1-210ENST00000513725 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
SFXN1-210ENST00000513725 SLC52A2Q9HAB3 445 aa16.42■□□□□ 0.22
SFXN1-210ENST00000513725 GRIPAP1Q4V328 841 aa16.41■□□□□ 0.22
SFXN1-210ENST00000513725 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
SFXN1-210ENST00000513725 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
SFXN1-210ENST00000513725 TBC1D8O95759 1140 aa16.39■□□□□ 0.21
SFXN1-210ENST00000513725 GMPSP49915 693 aaPredicted RBP16.39■□□□□ 0.21
SFXN1-210ENST00000513725 HIRAP54198 1017 aaPredicted RBP16.39■□□□□ 0.21
SFXN1-210ENST00000513725 OTUD5Q96G74 571 aa16.39■□□□□ 0.21
SFXN1-210ENST00000513725 NOM1Q5C9Z4 860 aaKnown RBP16.38■□□□□ 0.21
SFXN1-210ENST00000513725 BCL2L13Q9BXK5 485 aa16.38■□□□□ 0.21
SFXN1-210ENST00000513725 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
SFXN1-210ENST00000513725 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
SFXN1-210ENST00000513725 GPR25O00155 361 aa16.37■□□□□ 0.21
SFXN1-210ENST00000513725 CAMTA2O94983 1202 aa16.37■□□□□ 0.21
SFXN1-210ENST00000513725 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
SFXN1-210ENST00000513725 TPTE2Q6XPS3 522 aa16.37■□□□□ 0.21
SFXN1-210ENST00000513725 TESK2Q96S53 571 aa16.37■□□□□ 0.21
SFXN1-210ENST00000513725 CEP290O15078 2479 aa16.37■□□□□ 0.21
SFXN1-210ENST00000513725 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
SFXN1-210ENST00000513725 CXCL9Q07325 125 aa16.36■□□□□ 0.21
SFXN1-210ENST00000513725 TRPM4Q8TD43 1214 aa16.36■□□□□ 0.21
SFXN1-210ENST00000513725 H0YGN5 161 aa16.35■□□□□ 0.21
SFXN1-210ENST00000513725 DLK2Q6UY11 383 aa16.35■□□□□ 0.21
SFXN1-210ENST00000513725 CHRDL2Q6WN34 429 aa16.35■□□□□ 0.21
SFXN1-210ENST00000513725 KRT26Q7Z3Y9 468 aa16.35■□□□□ 0.21
SFXN1-210ENST00000513725 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
SFXN1-210ENST00000513725 PAPPA2Q9BXP8 1791 aa16.35■□□□□ 0.21
SFXN1-210ENST00000513725 H7C1D1 291 aa16.34■□□□□ 0.21
SFXN1-210ENST00000513725 FKTNO75072 461 aa16.34■□□□□ 0.21
SFXN1-210ENST00000513725 EN2P19622 333 aaPredicted RBP16.34■□□□□ 0.21
SFXN1-210ENST00000513725 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
SFXN1-210ENST00000513725 RASAL3Q86YV0 1011 aa16.33■□□□□ 0.2
SFXN1-210ENST00000513725 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.2
SFXN1-210ENST00000513725 VPS33BQ9H267 617 aa16.33■□□□□ 0.2
SFXN1-210ENST00000513725 KIAA0100Q14667 2235 aaKnown RBP16.33■□□□□ 0.2
SFXN1-210ENST00000513725 CLEC4GQ6UXB4 293 aa16.32■□□□□ 0.2
SFXN1-210ENST00000513725 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
SFXN1-210ENST00000513725 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
SFXN1-210ENST00000513725 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
SFXN1-210ENST00000513725 CNOT7Q9UIV1 285 aaKnown RBP16.32■□□□□ 0.2
SFXN1-210ENST00000513725 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
SFXN1-210ENST00000513725 BRCA2P51587 3418 aa16.31■□□□□ 0.2
SFXN1-210ENST00000513725 CENPFP49454 3210 aa16.31■□□□□ 0.2
SFXN1-210ENST00000513725 MRC1P22897 1456 aa16.31■□□□□ 0.2
SFXN1-210ENST00000513725 TNIP1Q15025 636 aa16.31■□□□□ 0.2
SFXN1-210ENST00000513725 AOC3Q16853 763 aa16.31■□□□□ 0.2
SFXN1-210ENST00000513725 DCPSQ96C86 337 aaKnown RBP16.31■□□□□ 0.2
SFXN1-210ENST00000513725 RBM27Q9P2N5 1060 aaKnown RBP16.31■□□□□ 0.2
SFXN1-210ENST00000513725 RANBP2P49792 3224 aaKnown RBP16.3■□□□□ 0.2
SFXN1-210ENST00000513725 HTTP42858 3142 aa16.3■□□□□ 0.2
SFXN1-210ENST00000513725 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
SFXN1-210ENST00000513725 ADM5C9JUS6 153 aa16.29■□□□□ 0.2
SFXN1-210ENST00000513725 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
SFXN1-210ENST00000513725 AEBP1Q8IUX7 1158 aa16.29■□□□□ 0.2
SFXN1-210ENST00000513725 COL25A1Q9BXS0 654 aaPredicted RBP16.29■□□□□ 0.2
SFXN1-210ENST00000513725 TMX4Q9H1E5 349 aaPredicted RBP16.29■□□□□ 0.2
SFXN1-210ENST00000513725 TRIM17Q9Y577 477 aa16.29■□□□□ 0.2
SFXN1-210ENST00000513725 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
SFXN1-210ENST00000513725 TNNT2P45379 298 aaPredicted RBP16.28■□□□□ 0.2
SFXN1-210ENST00000513725 NEUROD1Q13562 356 aa16.28■□□□□ 0.2
SFXN1-210ENST00000513725 MICALL2Q8IY33 904 aa16.28■□□□□ 0.2
SFXN1-210ENST00000513725 SIN3AQ96ST3 1273 aa16.28■□□□□ 0.2
SFXN1-210ENST00000513725 TMEM106CQ9BVX2 250 aa16.28■□□□□ 0.2
SFXN1-210ENST00000513725 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
SFXN1-210ENST00000513725 FAM177BA6PVY3 158 aa16.27■□□□□ 0.2
SFXN1-210ENST00000513725 RAD17O75943 681 aa16.27■□□□□ 0.2
SFXN1-210ENST00000513725 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
SFXN1-210ENST00000513725 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.2
SFXN1-210ENST00000513725 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.2
SFXN1-210ENST00000513725 PPEF1O14829 653 aaPredicted RBP16.26■□□□□ 0.19
SFXN1-210ENST00000513725 A1BGP04217 495 aa16.26■□□□□ 0.19
SFXN1-210ENST00000513725 TM4SF4P48230 202 aa16.26■□□□□ 0.19
SFXN1-210ENST00000513725 SUPT20HQ8NEM7 779 aa16.26■□□□□ 0.19
SFXN1-210ENST00000513725 HEG1Q9ULI3 1381 aa16.26■□□□□ 0.19
SFXN1-210ENST00000513725 SHTN1A0MZ66 631 aa16.25■□□□□ 0.19
SFXN1-210ENST00000513725 SULT6B1Q6IMI4 303 aa16.25■□□□□ 0.19
SFXN1-210ENST00000513725 OTOP1Q7RTM1 612 aa16.25■□□□□ 0.19
SFXN1-210ENST00000513725 SAMD7Q7Z3H4 446 aa16.25■□□□□ 0.19
SFXN1-210ENST00000513725 SULF1Q8IWU6 871 aa16.25■□□□□ 0.19
SFXN1-210ENST00000513725 ARMC5Q96C12 935 aa16.25■□□□□ 0.19
SFXN1-210ENST00000513725 CFHR5Q9BXR6 569 aa16.25■□□□□ 0.19
SFXN1-210ENST00000513725 POLR2AP24928 1970 aaKnown RBP16.25■□□□□ 0.19
SFXN1-210ENST00000513725 TCERG1O14776 1098 aaKnown RBP16.24■□□□□ 0.19
SFXN1-210ENST00000513725 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
SFXN1-210ENST00000513725 FKBP1BP68106 108 aa16.24■□□□□ 0.19
SFXN1-210ENST00000513725 ZNF496Q96IT1 587 aaPredicted RBP16.24■□□□□ 0.19
SFXN1-210ENST00000513725 UNC80Q8N2C7 3258 aa16.24■□□□□ 0.19
SFXN1-210ENST00000513725 SREBF2Q12772 1141 aa16.23■□□□□ 0.19
SFXN1-210ENST00000513725 TBC1D10BQ4KMP7 808 aaPredicted RBP16.23■□□□□ 0.19
SFXN1-210ENST00000513725 DPF2Q92785 391 aa16.23■□□□□ 0.19
SFXN1-210ENST00000513725 KIF7Q2M1P5 1343 aa16.22■□□□□ 0.19
SFXN1-210ENST00000513725 CDCA5Q96FF9 252 aa16.22■□□□□ 0.19
SFXN1-210ENST00000513725 RBM17Q96I25 401 aaKnown RBP16.22■□□□□ 0.19
SFXN1-210ENST00000513725 PTPN22Q9Y2R2 807 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms