RNA–Protein interactions for RNA: ENST00000513595.1

FOXD1-201, Transcript of forkhead box D1, humanhuman

TSL 3

Gene FOXD1, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD1-201ENST00000513595 MYH16Q9H6N6 1097 aa17.22■□□□□ 0.35
FOXD1-201ENST00000513595 NARFQ9UHQ1 456 aa17.22■□□□□ 0.35
FOXD1-201ENST00000513595 PDZRN3Q9UPQ7 1066 aa17.22■□□□□ 0.35
FOXD1-201ENST00000513595 DLEC1Q9Y238 1755 aa17.21■□□□□ 0.35
FOXD1-201ENST00000513595 AOC2O75106 756 aa17.21■□□□□ 0.35
FOXD1-201ENST00000513595 DUSP27Q5VZP5 1158 aa17.21■□□□□ 0.35
FOXD1-201ENST00000513595 SOS1Q07889 1333 aaPredicted RBP17.21■□□□□ 0.34
FOXD1-201ENST00000513595 ZNF622Q969S3 477 aaKnown RBP eCLIP17.2■□□□□ 0.34
FOXD1-201ENST00000513595 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
FOXD1-201ENST00000513595 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
FOXD1-201ENST00000513595 CA12O43570 354 aa17.19■□□□□ 0.34
FOXD1-201ENST00000513595 PNMA8AQ86V59 439 aaPredicted RBP17.19■□□□□ 0.34
FOXD1-201ENST00000513595 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
FOXD1-201ENST00000513595 BCL2L12Q9HB09 334 aa17.19■□□□□ 0.34
FOXD1-201ENST00000513595 ADAMTS7Q9UKP4 1686 aa17.19■□□□□ 0.34
FOXD1-201ENST00000513595 DICER1Q9UPY3 1922 aaKnown RBP17.19■□□□□ 0.34
FOXD1-201ENST00000513595 CARMIL3Q8ND23 1372 aa17.18■□□□□ 0.34
FOXD1-201ENST00000513595 GNAT3A8MTJ3 354 aa17.18■□□□□ 0.34
FOXD1-201ENST00000513595 DCBLD2Q96PD2 775 aa17.18■□□□□ 0.34
FOXD1-201ENST00000513595 DDX21Q9NR30 783 aaKnown RBP eCLIP17.18■□□□□ 0.34
FOXD1-201ENST00000513595 HACL1Q9UJ83 578 aa17.18■□□□□ 0.34
FOXD1-201ENST00000513595 SCN4AP35499 1836 aa17.17■□□□□ 0.34
FOXD1-201ENST00000513595 EPHX2P34913 555 aa17.17■□□□□ 0.34
FOXD1-201ENST00000513595 PDE6BP35913 854 aa17.17■□□□□ 0.34
FOXD1-201ENST00000513595 HABP4Q5JVS0 413 aaKnown RBP17.17■□□□□ 0.34
FOXD1-201ENST00000513595 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
FOXD1-201ENST00000513595 BRIP1Q9BX63 1249 aa17.17■□□□□ 0.34
FOXD1-201ENST00000513595 MAP2K2P36507 400 aa17.16■□□□□ 0.34
FOXD1-201ENST00000513595 GNAI1P63096 354 aa17.16■□□□□ 0.34
FOXD1-201ENST00000513595 AKAP4Q5JQC9 854 aa17.16■□□□□ 0.34
FOXD1-201ENST00000513595 NBPF15Q8N660 670 aa17.16■□□□□ 0.34
FOXD1-201ENST00000513595 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
FOXD1-201ENST00000513595 AFDNP55196 1824 aaKnown RBP17.16■□□□□ 0.34
FOXD1-201ENST00000513595 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
FOXD1-201ENST00000513595 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
FOXD1-201ENST00000513595 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
FOXD1-201ENST00000513595 DNAJC10Q8IXB1 793 aa17.15■□□□□ 0.34
FOXD1-201ENST00000513595 FER1L6Q2WGJ9 1857 aa17.14■□□□□ 0.33
FOXD1-201ENST00000513595 CYP19A1P11511 503 aaPredicted RBP17.14■□□□□ 0.33
FOXD1-201ENST00000513595 FMR1Q06787 632 aaKnown RBP eCLIP17.14■□□□□ 0.33
FOXD1-201ENST00000513595 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
FOXD1-201ENST00000513595 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
FOXD1-201ENST00000513595 CNKSR1Q969H4 720 aa17.13■□□□□ 0.33
FOXD1-201ENST00000513595 RCAN3Q9UKA8 241 aa17.13■□□□□ 0.33
FOXD1-201ENST00000513595 FANCIQ9NVI1 1328 aa17.13■□□□□ 0.33
FOXD1-201ENST00000513595 COL15A1P39059 1388 aa17.13■□□□□ 0.33
FOXD1-201ENST00000513595 ADAMTSL1Q8N6G6 1762 aa17.12■□□□□ 0.33
FOXD1-201ENST00000513595 THUMPD2Q9BTF0 503 aaKnown RBP17.12■□□□□ 0.33
FOXD1-201ENST00000513595 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
FOXD1-201ENST00000513595 TJP1Q07157 1748 aa17.12■□□□□ 0.33
FOXD1-201ENST00000513595 DLL1O00548 723 aa17.11■□□□□ 0.33
FOXD1-201ENST00000513595 DCTN1Q14203 1278 aa17.11■□□□□ 0.33
FOXD1-201ENST00000513595 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
FOXD1-201ENST00000513595 BICDL1Q6ZP65 573 aa17.11■□□□□ 0.33
FOXD1-201ENST00000513595 MCM10Q7L590 875 aa17.11■□□□□ 0.33
FOXD1-201ENST00000513595 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
FOXD1-201ENST00000513595 ZNF541Q9H0D2 1346 aa17.11■□□□□ 0.33
FOXD1-201ENST00000513595 PRPF40BQ6NWY9 871 aaKnown RBP17.1■□□□□ 0.33
FOXD1-201ENST00000513595 TLL2Q9Y6L7 1015 aa17.1■□□□□ 0.33
FOXD1-201ENST00000513595 CEMIPQ8WUJ3 1361 aa17.1■□□□□ 0.33
FOXD1-201ENST00000513595 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
FOXD1-201ENST00000513595 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
FOXD1-201ENST00000513595 PRR5LQ6MZQ0 368 aa17.09■□□□□ 0.33
FOXD1-201ENST00000513595 C7orf43Q8WVR3 580 aa17.09■□□□□ 0.33
FOXD1-201ENST00000513595 ZBTB1Q9Y2K1 713 aa17.09■□□□□ 0.33
FOXD1-201ENST00000513595 SUPT16HQ9Y5B9 1047 aaKnown RBP17.09■□□□□ 0.33
FOXD1-201ENST00000513595 CHL1O00533 1208 aa17.08■□□□□ 0.32
FOXD1-201ENST00000513595 NEFLP07196 543 aa17.08■□□□□ 0.32
FOXD1-201ENST00000513595 SRGNP10124 158 aa17.08■□□□□ 0.32
FOXD1-201ENST00000513595 CST9Q5W186 159 aa17.08■□□□□ 0.32
FOXD1-201ENST00000513595 IL17REQ8NFR9 667 aa17.08■□□□□ 0.32
FOXD1-201ENST00000513595 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
FOXD1-201ENST00000513595 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
FOXD1-201ENST00000513595 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
FOXD1-201ENST00000513595 CCDC24Q8N4L8 307 aa17.07■□□□□ 0.32
FOXD1-201ENST00000513595 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
FOXD1-201ENST00000513595 MASTLQ96GX5 879 aa17.07■□□□□ 0.32
FOXD1-201ENST00000513595 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
FOXD1-201ENST00000513595 FZD9O00144 591 aa17.06■□□□□ 0.32
FOXD1-201ENST00000513595 TRAF5O00463 557 aa17.06■□□□□ 0.32
FOXD1-201ENST00000513595 FKBP4Q02790 459 aaKnown RBP eCLIP17.06■□□□□ 0.32
FOXD1-201ENST00000513595 CCDC93Q567U6 631 aa17.06■□□□□ 0.32
FOXD1-201ENST00000513595 GPC2Q8N158 579 aa17.06■□□□□ 0.32
FOXD1-201ENST00000513595 ZNF428Q96B54 188 aa17.06■□□□□ 0.32
FOXD1-201ENST00000513595 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
FOXD1-201ENST00000513595 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
FOXD1-201ENST00000513595 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
FOXD1-201ENST00000513595 CUL9Q8IWT3 2517 aa17.05■□□□□ 0.32
FOXD1-201ENST00000513595 A0A087WZG4 1122 aa17.04■□□□□ 0.32
FOXD1-201ENST00000513595 FXR1P51114 621 aaKnown RBP eCLIP17.04■□□□□ 0.32
FOXD1-201ENST00000513595 EIF5P55010 431 aaKnown RBP17.04■□□□□ 0.32
FOXD1-201ENST00000513595 TEFQ10587 303 aa17.04■□□□□ 0.32
FOXD1-201ENST00000513595 TSPYL4Q9UJ04 414 aa17.04■□□□□ 0.32
FOXD1-201ENST00000513595 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
FOXD1-201ENST00000513595 CANXP27824 592 aaKnown RBP17.03■□□□□ 0.32
FOXD1-201ENST00000513595 VSIG10Q8N0Z9 540 aa17.03■□□□□ 0.32
FOXD1-201ENST00000513595 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.03■□□□□ 0.32
FOXD1-201ENST00000513595 MS4A3Q96HJ5 214 aa17.03■□□□□ 0.32
FOXD1-201ENST00000513595 SLX4Q8IY92 1834 aa17.03■□□□□ 0.32
FOXD1-201ENST00000513595 SAPCD2Q86UD0 394 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms