RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
PROM1-215ENST00000513448 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
PROM1-215ENST00000513448 CYP46A1Q9Y6A2 500 aa11.2□□□□□ -0.62
PROM1-215ENST00000513448 SOS2Q07890 1332 aaPredicted RBP11.2□□□□□ -0.62
PROM1-215ENST00000513448 ATP5JP18859 108 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
PROM1-215ENST00000513448 AK2P54819 239 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 CHRNA2Q15822 529 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 CAVIN1Q6NZI2 390 aaKnown RBP11.19□□□□□ -0.62
PROM1-215ENST00000513448 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 ZCRB1Q8TBF4 217 aaKnown RBP11.19□□□□□ -0.62
PROM1-215ENST00000513448 CABLES1Q8TDN4 633 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 DDX17Q92841 729 aaKnown RBP11.19□□□□□ -0.62
PROM1-215ENST00000513448 SYAP1Q96A49 352 aaPredicted RBP11.19□□□□□ -0.62
PROM1-215ENST00000513448 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
PROM1-215ENST00000513448 TSGA10IPQ3SY00 556 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 TMEM87AQ8NBN3 555 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 GPT2Q8TD30 523 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 PPP1R9BQ96SB3 815 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 HMG20BQ9P0W2 317 aa11.19□□□□□ -0.62
PROM1-215ENST00000513448 NCLP19338 710 aaKnown RBP11.18□□□□□ -0.62
PROM1-215ENST00000513448 CASTP20810 708 aaKnown RBP11.18□□□□□ -0.62
PROM1-215ENST00000513448 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
PROM1-215ENST00000513448 ANKRD1Q15327 319 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 RUFY3Q7L099 469 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 TRIM44Q96DX7 344 aaPredicted RBP11.18□□□□□ -0.62
PROM1-215ENST00000513448 ARXQ96QS3 562 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 CARD10Q9BWT7 1032 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 CCDC8Q9H0W5 538 aaPredicted RBP11.18□□□□□ -0.62
PROM1-215ENST00000513448 PDRG1Q9NUG6 133 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 A0A087WZG4 1122 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 H7C1W4 665 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 CLCN1P35523 988 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 CASP7P55210 303 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 PTH1RQ03431 593 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 GPR108Q9NPR9 543 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 PRDM11Q9NQV5 511 aa11.18□□□□□ -0.62
PROM1-215ENST00000513448 JCADQ9P266 1359 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 ARFGEF2Q9Y6D5 1785 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 PHF14O94880 888 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 TNNI3KQ59H18 835 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 CREB3L3Q68CJ9 461 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 PRPF40BQ6NWY9 871 aaKnown RBP11.17□□□□□ -0.62
PROM1-215ENST00000513448 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 FSD1Q9BTV5 496 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 ATG3Q9NT62 314 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 SMC3Q9UQE7 1217 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 RBM8AQ9Y5S9 174 aaKnown RBP11.17□□□□□ -0.62
PROM1-215ENST00000513448 FPGT-TNNI3KV9GXZ4 949 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 MED23Q9ULK4 1368 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 GLI3P10071 1580 aa11.17□□□□□ -0.62
PROM1-215ENST00000513448 STX6O43752 255 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 ZSCAN22P10073 491 aaPredicted RBP11.16□□□□□ -0.62
PROM1-215ENST00000513448 NMIQ13287 307 aaPredicted RBP11.16□□□□□ -0.62
PROM1-215ENST00000513448 KRT32Q14532 448 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 HS1BP3Q53T59 392 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 UBE3BQ7Z3V4 1068 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 CCDC191Q8NCU4 936 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 JAKMIP1Q96N16 626 aaKnown RBP11.16□□□□□ -0.62
PROM1-215ENST00000513448 SIL1Q9H173 461 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 BOLA2Q9H3K6 86 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 RPAP1Q9BWH6 1393 aaPredicted RBP11.16□□□□□ -0.62
PROM1-215ENST00000513448 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 AFDNP55196 1824 aaKnown RBP11.16□□□□□ -0.62
PROM1-215ENST00000513448 COL5A2P05997 1499 aaPredicted RBP11.16□□□□□ -0.62
PROM1-215ENST00000513448 IL2RBP14784 551 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 KCNJ4P48050 445 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 USPL1Q5W0Q7 1092 aa11.16□□□□□ -0.62
PROM1-215ENST00000513448 NOL8Q76FK4 1167 aaKnown RBP11.16□□□□□ -0.62
PROM1-215ENST00000513448 CWC25Q9NXE8 425 aaPredicted RBP11.16□□□□□ -0.62
PROM1-215ENST00000513448 XIRP1Q702N8 1843 aaKnown RBP11.16□□□□□ -0.62
PROM1-215ENST00000513448 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.62
PROM1-215ENST00000513448 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
PROM1-215ENST00000513448 SLC27A2O14975 620 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 LETM1O95202 739 aaPredicted RBP11.14□□□□□ -0.63
PROM1-215ENST00000513448 SYT1P21579 422 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 FAM227BQ96M60 508 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 HAUS7Q99871 368 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 RRAGDQ9NQL2 400 aaPredicted RBP11.14□□□□□ -0.63
PROM1-215ENST00000513448 TLR7Q9NYK1 1049 aaKnown RBP11.14□□□□□ -0.63
PROM1-215ENST00000513448 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 DBNLQ9UJU6 430 aaKnown RBP11.14□□□□□ -0.63
PROM1-215ENST00000513448 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.14□□□□□ -0.63
PROM1-215ENST00000513448 TNS2Q63HR2 1409 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 ESPNB1AK53 854 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 PDCP20941 246 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 IL15P40933 162 aaPredicted RBP11.14□□□□□ -0.63
PROM1-215ENST00000513448 FOXO4P98177 505 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 TFCP2Q12800 502 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 ADCK5Q3MIX3 580 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 NBPF10Q6P3W6 841 aaKnown RBP11.14□□□□□ -0.63
PROM1-215ENST00000513448 BLOC1S2Q6QNY1 142 aa11.14□□□□□ -0.63
PROM1-215ENST00000513448 NBPF15Q8N660 670 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms