RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 ZNF652Q9Y2D9 606 aa9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 DLEC1Q9Y238 1755 aa9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 ATP10DQ9P241 1426 aa9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 PTPRCP08575 1304 aa9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 PSDA5PKW4 1024 aaPredicted RBP9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 ERVV-1B6SEH8 477 aa9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 CAMTA2O94983 1202 aa9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 AIMP1Q12904 312 aaKnown RBP9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 TTLL7Q6ZT98 887 aa9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 G2E3Q7L622 706 aa9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 ARXQ96QS3 562 aa9.68□□□□□ -0.86
HMGXB3-204ENST00000513318 ADCY9O60503 1353 aa9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 GYS1P13807 737 aa9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 PDAP1Q13442 181 aaKnown RBP9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 FKBP5Q13451 457 aaPredicted RBP9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 USPL1Q5W0Q7 1092 aa9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 CLEC4GQ6UXB4 293 aa9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 GIGYF2Q6Y7W6 1299 aaKnown RBP9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 ANKRD13DQ6ZTN6 518 aa9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 RIC3Q7Z5B4 369 aa9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 PLBD2Q8NHP8 589 aa9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 ZBTB3Q9H5J0 574 aa9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 SRP68Q9UHB9 627 aaKnown RBP9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 RCAN3Q9UKA8 241 aa9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 BRCA1P38398 1863 aaKnown RBP9.67□□□□□ -0.86
HMGXB3-204ENST00000513318 PSEN1P49768 467 aa9.66□□□□□ -0.86
HMGXB3-204ENST00000513318 HSP90AB3PQ58FF7 597 aa9.66□□□□□ -0.86
HMGXB3-204ENST00000513318 KSR2Q6VAB6 950 aa9.66□□□□□ -0.86
HMGXB3-204ENST00000513318 NLGN1Q8N2Q7 840 aa9.66□□□□□ -0.86
HMGXB3-204ENST00000513318 PDGFDQ9GZP0 370 aaPredicted RBP9.66□□□□□ -0.86
HMGXB3-204ENST00000513318 MTFR1LQ9H019 292 aa9.66□□□□□ -0.86
HMGXB3-204ENST00000513318 BCL2L12Q9HB09 334 aa9.66□□□□□ -0.86
HMGXB3-204ENST00000513318 CARMIL3Q8ND23 1372 aa9.65□□□□□ -0.86
HMGXB3-204ENST00000513318 PI4KAP2A4QPH2 592 aa9.65□□□□□ -0.86
HMGXB3-204ENST00000513318 HLFQ16534 295 aa9.65□□□□□ -0.86
HMGXB3-204ENST00000513318 PI4KAP1Q8N8J0 262 aa9.65□□□□□ -0.86
HMGXB3-204ENST00000513318 MAP3K2Q9Y2U5 619 aa9.65□□□□□ -0.86
HMGXB3-204ENST00000513318 COL11A2P13942 1736 aaPredicted RBP9.65□□□□□ -0.87
HMGXB3-204ENST00000513318 KIAA1551Q9HCM1 1747 aa9.65□□□□□ -0.87
HMGXB3-204ENST00000513318 IBTKQ9P2D0 1353 aaPredicted RBP9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 SPEF2Q9C093 1822 aa9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 IPO8O15397 1037 aaKnown RBP9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 BCAR3O75815 825 aa9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 NEXNQ0ZGT2 675 aa9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 TBC1D9BQ66K14 1250 aa9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 DNAAF4Q8WXU2 420 aa9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 ARHGAP45Q92619 1136 aa9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 ZFP91Q96JP5 570 aaPredicted RBP9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 API5Q9BZZ5 524 aaKnown RBP9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 BMP2KQ9NSY1 1161 aaPredicted RBP9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 NOB1Q9ULX3 412 aaKnown RBP9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 TNRC6CQ9HCJ0 1690 aaKnown RBP9.64□□□□□ -0.87
HMGXB3-204ENST00000513318 ZBTB7AO95365 584 aa9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 TIE1P35590 1138 aa9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 TCIRG1Q13488 830 aa9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 NFIXQ14938 502 aa9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 PARP10Q53GL7 1025 aa9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 ZKSCAN2Q63HK3 967 aa9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 MSL1Q68DK7 614 aa9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 FRAT1Q92837 279 aaPredicted RBP9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 SETDB2Q96T68 719 aa9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 NIP7Q9Y221 180 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 TAF1P21675 1872 aa9.63□□□□□ -0.87
HMGXB3-204ENST00000513318 UBN2Q6ZU65 1347 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 F6X3S4 739 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 MMP10P09238 476 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 TRIM27P14373 513 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 GPTP24298 496 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 POLD1P28340 1107 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 TM4SF1P30408 202 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 ATF7IPQ6VMQ6 1270 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 ZNF34Q8IZ26 560 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 LINS1Q8NG48 757 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 MYD88Q99836 296 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 ISCA1Q9BUE6 129 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 TMEM106CQ9BVX2 250 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 SPON1Q9HCB6 807 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 RIC1Q4ADV7 1423 aa9.62□□□□□ -0.87
HMGXB3-204ENST00000513318 ARFGEF1Q9Y6D6 1849 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 ABCC4O15439 1325 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 RNF123Q5XPI4 1314 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 TTLL13PA6NNM8 815 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 POLRMTO00411 1230 aaKnown RBP9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 POTEIP0CG38 1075 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 TRIM28Q13263 835 aaKnown RBP9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 SLC4A10Q6U841 1118 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 PPP1R42Q7Z4L9 355 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 CCDC191Q8NCU4 936 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 NYXQ9GZU5 481 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 TAOK2Q9UL54 1235 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 PARP3Q9Y6F1 533 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 C10orf71Q711Q0 1435 aa9.61□□□□□ -0.87
HMGXB3-204ENST00000513318 NEURL1BA8MQ27 555 aa9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 ATP5J2-PTCD1G3V325 749 aa9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 ATMINO43313 823 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms