RNA–Protein interactions for RNA: ENST00000513156.5

PTPN20-226, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-226ENST00000513156 HHIPL1Q96JK4 782 aa13.43□□□□□ -0.26
PTPN20-226ENST00000513156 BABAM1Q9NWV8 329 aa13.43□□□□□ -0.26
PTPN20-226ENST00000513156 ZBTB1Q9Y2K1 713 aa13.43□□□□□ -0.26
PTPN20-226ENST00000513156 APAF1O14727 1248 aa13.42□□□□□ -0.26
PTPN20-226ENST00000513156 SRGNP10124 158 aa13.42□□□□□ -0.26
PTPN20-226ENST00000513156 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTPN20-226ENST00000513156 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
PTPN20-226ENST00000513156 CCDC27Q2M243 656 aa13.42□□□□□ -0.26
PTPN20-226ENST00000513156 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
PTPN20-226ENST00000513156 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
PTPN20-226ENST00000513156 COL4A5P29400 1685 aa13.42□□□□□ -0.26
PTPN20-226ENST00000513156 CUL9Q8IWT3 2517 aa13.42□□□□□ -0.26
PTPN20-226ENST00000513156 CALD1Q05682 793 aaKnown RBP13.41□□□□□ -0.26
PTPN20-226ENST00000513156 CCDC93Q567U6 631 aa13.41□□□□□ -0.26
PTPN20-226ENST00000513156 FAM9BQ8IZU0 186 aa13.41□□□□□ -0.26
PTPN20-226ENST00000513156 MKI67P46013 3256 aaKnown RBP13.41□□□□□ -0.26
PTPN20-226ENST00000513156 DLL1O00548 723 aa13.4□□□□□ -0.26
PTPN20-226ENST00000513156 EPS15P42566 896 aa13.4□□□□□ -0.26
PTPN20-226ENST00000513156 SCNN1DP51172 638 aa13.4□□□□□ -0.26
PTPN20-226ENST00000513156 OLFM4Q6UX06 510 aa13.4□□□□□ -0.26
PTPN20-226ENST00000513156 MCM10Q7L590 875 aa13.4□□□□□ -0.26
PTPN20-226ENST00000513156 VSIG10Q8N0Z9 540 aa13.4□□□□□ -0.26
PTPN20-226ENST00000513156 BTBD11A6QL63 1104 aa13.39□□□□□ -0.27
PTPN20-226ENST00000513156 CELF2O95319 508 aaKnown RBP13.39□□□□□ -0.27
PTPN20-226ENST00000513156 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
PTPN20-226ENST00000513156 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
PTPN20-226ENST00000513156 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
PTPN20-226ENST00000513156 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
PTPN20-226ENST00000513156 MRC1P22897 1456 aa13.39□□□□□ -0.27
PTPN20-226ENST00000513156 LMOD1P29536 600 aaPredicted RBP13.38□□□□□ -0.27
PTPN20-226ENST00000513156 IARSP41252 1262 aaKnown RBP13.38□□□□□ -0.27
PTPN20-226ENST00000513156 NOGQ13253 232 aa13.38□□□□□ -0.27
PTPN20-226ENST00000513156 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
PTPN20-226ENST00000513156 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
PTPN20-226ENST00000513156 TTC5Q8N0Z6 440 aa13.38□□□□□ -0.27
PTPN20-226ENST00000513156 TEX13AQ9BXU3 409 aaPredicted RBP13.38□□□□□ -0.27
PTPN20-226ENST00000513156 GJA3Q9Y6H8 435 aa13.38□□□□□ -0.27
PTPN20-226ENST00000513156 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
PTPN20-226ENST00000513156 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
PTPN20-226ENST00000513156 USP50Q70EL3 339 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-226ENST00000513156 CTU1Q7Z7A3 348 aaKnown RBP13.37□□□□□ -0.27
PTPN20-226ENST00000513156 SAGE1Q9NXZ1 904 aa13.37□□□□□ -0.27
PTPN20-226ENST00000513156 SZT2Q5T011 3432 aa13.37□□□□□ -0.27
PTPN20-226ENST00000513156 POLR2AP24928 1970 aaKnown RBP13.36□□□□□ -0.27
PTPN20-226ENST00000513156 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
PTPN20-226ENST00000513156 RRP7AQ9Y3A4 280 aaKnown RBP13.36□□□□□ -0.27
PTPN20-226ENST00000513156 SNED1Q8TER0 1413 aa13.36□□□□□ -0.27
PTPN20-226ENST00000513156 CHL1O00533 1208 aa13.35□□□□□ -0.27
PTPN20-226ENST00000513156 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
PTPN20-226ENST00000513156 EIF5P55010 431 aaKnown RBP13.35□□□□□ -0.27
PTPN20-226ENST00000513156 WDR63Q8IWG1 891 aa13.35□□□□□ -0.27
PTPN20-226ENST00000513156 SYNE4Q8N205 404 aa13.35□□□□□ -0.27
PTPN20-226ENST00000513156 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
PTPN20-226ENST00000513156 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-226ENST00000513156 SLC39A6Q13433 755 aa13.34□□□□□ -0.27
PTPN20-226ENST00000513156 WWC1Q8IX03 1113 aa13.34□□□□□ -0.27
PTPN20-226ENST00000513156 RTKN2Q8IZC4 609 aa13.34□□□□□ -0.27
PTPN20-226ENST00000513156 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
PTPN20-226ENST00000513156 IL16Q14005 1332 aa13.34□□□□□ -0.27
PTPN20-226ENST00000513156 A0A0C4DFX4 3053 aa13.33□□□□□ -0.27
PTPN20-226ENST00000513156 CEP290O15078 2479 aa13.33□□□□□ -0.28
PTPN20-226ENST00000513156 FAM155AB1AL88 458 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-226ENST00000513156 TRPA1O75762 1119 aa13.33□□□□□ -0.28
PTPN20-226ENST00000513156 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
PTPN20-226ENST00000513156 GNAI1P63096 354 aa13.33□□□□□ -0.28
PTPN20-226ENST00000513156 JDP2Q8WYK2 163 aa13.33□□□□□ -0.28
PTPN20-226ENST00000513156 IFT57Q9NWB7 429 aa13.33□□□□□ -0.28
PTPN20-226ENST00000513156 STARD3NLO95772 234 aa13.32□□□□□ -0.28
PTPN20-226ENST00000513156 SNRPA1P09661 255 aaKnown RBP13.32□□□□□ -0.28
PTPN20-226ENST00000513156 ZNF853P0CG23 659 aa13.32□□□□□ -0.28
PTPN20-226ENST00000513156 NPR1P16066 1061 aa13.32□□□□□ -0.28
PTPN20-226ENST00000513156 ST5P78524 1137 aa13.32□□□□□ -0.28
PTPN20-226ENST00000513156 ZNF496Q96IT1 587 aaPredicted RBP13.32□□□□□ -0.28
PTPN20-226ENST00000513156 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
PTPN20-226ENST00000513156 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
PTPN20-226ENST00000513156 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
PTPN20-226ENST00000513156 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
PTPN20-226ENST00000513156 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
PTPN20-226ENST00000513156 NPHP1O15259 732 aa13.31□□□□□ -0.28
PTPN20-226ENST00000513156 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
PTPN20-226ENST00000513156 HEG1Q9ULI3 1381 aa13.31□□□□□ -0.28
PTPN20-226ENST00000513156 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
PTPN20-226ENST00000513156 A0A087WZG4 1122 aa13.3□□□□□ -0.28
PTPN20-226ENST00000513156 HUNKP57058 714 aa13.3□□□□□ -0.28
PTPN20-226ENST00000513156 EIF4A1P60842 406 aaKnown RBP13.3□□□□□ -0.28
PTPN20-226ENST00000513156 KIF23Q02241 960 aaPredicted RBP13.3□□□□□ -0.28
PTPN20-226ENST00000513156 SETDB2Q96T68 719 aa13.3□□□□□ -0.28
PTPN20-226ENST00000513156 PSMD1Q99460 953 aa13.3□□□□□ -0.28
PTPN20-226ENST00000513156 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
PTPN20-226ENST00000513156 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
PTPN20-226ENST00000513156 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-226ENST00000513156 KCNQ3O43525 872 aa13.29□□□□□ -0.28
PTPN20-226ENST00000513156 HOXB7P09629 217 aa13.29□□□□□ -0.28
PTPN20-226ENST00000513156 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
PTPN20-226ENST00000513156 MIS18AQ9NYP9 233 aa13.29□□□□□ -0.28
PTPN20-226ENST00000513156 GPRC5DQ9NZD1 345 aa13.29□□□□□ -0.28
PTPN20-226ENST00000513156 PKN2Q16513 984 aaKnown RBP13.28□□□□□ -0.28
PTPN20-226ENST00000513156 DLG5Q8TDM6 1919 aa13.27□□□□□ -0.28
PTPN20-226ENST00000513156 CAMTA2O94983 1202 aa13.27□□□□□ -0.29
PTPN20-226ENST00000513156 RGMBQ6NW40 437 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms