RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 SERTM1A2A2V5 107 aa8.64□□□□□ -1.03
LINC01088-210ENST00000513153 SFI1A8K8P3 1242 aa8.64□□□□□ -1.03
LINC01088-210ENST00000513153 KCNQ4P56696 695 aa8.64□□□□□ -1.03
LINC01088-210ENST00000513153 PSME1Q06323 249 aa8.64□□□□□ -1.03
LINC01088-210ENST00000513153 HSH2DQ96JZ2 352 aa8.64□□□□□ -1.03
LINC01088-210ENST00000513153 POM121CA8CG34 1229 aa8.63□□□□□ -1.03
LINC01088-210ENST00000513153 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
LINC01088-210ENST00000513153 AFF1P51825 1210 aaKnown RBP8.63□□□□□ -1.03
LINC01088-210ENST00000513153 DEPDC4Q8N2C3 294 aa8.63□□□□□ -1.03
LINC01088-210ENST00000513153 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
LINC01088-210ENST00000513153 ANKIB1Q9P2G1 1089 aa8.63□□□□□ -1.03
LINC01088-210ENST00000513153 IREB2P48200 963 aaKnown RBP8.62□□□□□ -1.03
LINC01088-210ENST00000513153 PSAPL1Q6NUJ1 521 aa8.62□□□□□ -1.03
LINC01088-210ENST00000513153 TNS4Q8IZW8 715 aa8.62□□□□□ -1.03
LINC01088-210ENST00000513153 YBX3P16989 372 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC01088-210ENST00000513153 TYRO3Q06418 890 aa8.61□□□□□ -1.03
LINC01088-210ENST00000513153 UCN2Q96RP3 112 aa8.61□□□□□ -1.03
LINC01088-210ENST00000513153 KIAA1024Q9UPX6 916 aa8.61□□□□□ -1.03
LINC01088-210ENST00000513153 ZBTB7BO15156 539 aaPredicted RBP8.6□□□□□ -1.03
LINC01088-210ENST00000513153 RGS9O75916 674 aaPredicted RBP8.6□□□□□ -1.03
LINC01088-210ENST00000513153 C1orf53Q5VUE5 145 aa8.6□□□□□ -1.03
LINC01088-210ENST00000513153 ZNF280CQ8ND82 737 aa8.6□□□□□ -1.03
LINC01088-210ENST00000513153 HCN4Q9Y3Q4 1203 aa8.6□□□□□ -1.03
LINC01088-210ENST00000513153 NOS3P29474 1203 aa8.59□□□□□ -1.03
LINC01088-210ENST00000513153 ILDR2Q71H61 639 aa8.59□□□□□ -1.03
LINC01088-210ENST00000513153 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
LINC01088-210ENST00000513153 FMNL2Q96PY5 1086 aa8.59□□□□□ -1.03
LINC01088-210ENST00000513153 DNAJB12Q9NXW2 375 aaKnown RBP8.59□□□□□ -1.03
LINC01088-210ENST00000513153 SSTR4P31391 388 aa8.58□□□□□ -1.04
LINC01088-210ENST00000513153 CLDN10P78369 228 aa8.58□□□□□ -1.04
LINC01088-210ENST00000513153 PRR23CQ6ZRP0 262 aa8.58□□□□□ -1.04
LINC01088-210ENST00000513153 WWC1Q8IX03 1113 aa8.58□□□□□ -1.04
LINC01088-210ENST00000513153 SUSD3Q96L08 255 aa8.58□□□□□ -1.04
LINC01088-210ENST00000513153 PHACTR1Q9C0D0 580 aa8.58□□□□□ -1.04
LINC01088-210ENST00000513153 USP17L3A6NCW0 530 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 USP17L4A6NCW7 530 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 IRAK1P51617 712 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 MSL1Q68DK7 614 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 USP17L2Q6R6M4 530 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 POTEAQ6S8J7 498 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 USP17L1Q7RTZ2 530 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 FBXO11Q86XK2 927 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 MEGF10Q96KG7 1140 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 NAGPAQ9UK23 515 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 CHMP3Q9Y3E7 222 aa8.57□□□□□ -1.04
LINC01088-210ENST00000513153 PSMA6P60900 246 aaKnown RBP8.56□□□□□ -1.04
LINC01088-210ENST00000513153 DTWD1Q8N5C7 304 aa8.56□□□□□ -1.04
LINC01088-210ENST00000513153 RAD21O60216 631 aa8.55□□□□□ -1.04
LINC01088-210ENST00000513153 DKK1O94907 266 aa8.55□□□□□ -1.04
LINC01088-210ENST00000513153 UBTFP17480 764 aaKnown RBP8.55□□□□□ -1.04
LINC01088-210ENST00000513153 FLIIQ13045 1269 aa8.55□□□□□ -1.04
LINC01088-210ENST00000513153 CCDC102BQ68D86 513 aa8.55□□□□□ -1.04
LINC01088-210ENST00000513153 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
LINC01088-210ENST00000513153 TPCN2Q8NHX9 752 aa8.55□□□□□ -1.04
LINC01088-210ENST00000513153 EFCC1Q9HA90 598 aa8.55□□□□□ -1.04
LINC01088-210ENST00000513153 ATP9BO43861 1147 aa8.54□□□□□ -1.04
LINC01088-210ENST00000513153 HDGFL1Q5TGJ6 251 aa8.54□□□□□ -1.04
LINC01088-210ENST00000513153 PNMA5Q96PV4 448 aa8.54□□□□□ -1.04
LINC01088-210ENST00000513153 TSPAN10Q9H1Z9 355 aaPredicted RBP8.54□□□□□ -1.04
LINC01088-210ENST00000513153 FSTP19883 344 aa8.53□□□□□ -1.04
LINC01088-210ENST00000513153 HIRAP54198 1017 aaPredicted RBP8.53□□□□□ -1.04
LINC01088-210ENST00000513153 LCE1DQ5T752 114 aa8.53□□□□□ -1.04
LINC01088-210ENST00000513153 IGF2-ASQ6U949 168 aa8.53□□□□□ -1.04
LINC01088-210ENST00000513153 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
LINC01088-210ENST00000513153 KRTAP4-7Q9BYR0 210 aa8.53□□□□□ -1.04
LINC01088-210ENST00000513153 M0R2N6 131 aa8.52□□□□□ -1.05
LINC01088-210ENST00000513153 ATP1A2P50993 1020 aa8.52□□□□□ -1.05
LINC01088-210ENST00000513153 BTLAQ7Z6A9 289 aa8.52□□□□□ -1.05
LINC01088-210ENST00000513153 FAM35AQ86V20 835 aa8.52□□□□□ -1.05
LINC01088-210ENST00000513153 SIX5Q8N196 739 aa8.52□□□□□ -1.05
LINC01088-210ENST00000513153 GSX2Q9BZM3 304 aa8.52□□□□□ -1.05
LINC01088-210ENST00000513153 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.52□□□□□ -1.05
LINC01088-210ENST00000513153 CPB1P15086 417 aa8.51□□□□□ -1.05
LINC01088-210ENST00000513153 TAL1P17542 331 aaPredicted RBP8.51□□□□□ -1.05
LINC01088-210ENST00000513153 NFKB1P19838 968 aa8.51□□□□□ -1.05
LINC01088-210ENST00000513153 CD97P48960 835 aa8.51□□□□□ -1.05
LINC01088-210ENST00000513153 WFDC8Q8IUA0 241 aa8.51□□□□□ -1.05
LINC01088-210ENST00000513153 LARGE2Q8N3Y3 721 aa8.51□□□□□ -1.05
LINC01088-210ENST00000513153 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
LINC01088-210ENST00000513153 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
LINC01088-210ENST00000513153 C21orf2O43822 256 aa8.5□□□□□ -1.05
LINC01088-210ENST00000513153 CCINQ13939 588 aa8.5□□□□□ -1.05
LINC01088-210ENST00000513153 GRIK5Q16478 980 aa8.5□□□□□ -1.05
LINC01088-210ENST00000513153 FNBP4Q8N3X1 1017 aaPredicted RBP8.5□□□□□ -1.05
LINC01088-210ENST00000513153 PALM3A6NDB9 673 aaPredicted RBP8.49□□□□□ -1.05
LINC01088-210ENST00000513153 TSEN2Q8NCE0 465 aaKnown RBP8.49□□□□□ -1.05
LINC01088-210ENST00000513153 LPIN3Q9BQK8 851 aa8.49□□□□□ -1.05
LINC01088-210ENST00000513153 RNF114Q9Y508 228 aa8.49□□□□□ -1.05
LINC01088-210ENST00000513153 DZIP1LQ8IYY4 767 aaKnown RBP8.48□□□□□ -1.05
LINC01088-210ENST00000513153 ALDH16A1Q8IZ83 802 aa8.48□□□□□ -1.05
LINC01088-210ENST00000513153 AKTIPQ9H8T0 292 aa8.48□□□□□ -1.05
LINC01088-210ENST00000513153 FRRS1LQ9P0K9 344 aa8.48□□□□□ -1.05
LINC01088-210ENST00000513153 OAS3Q9Y6K5 1087 aaKnown RBP8.48□□□□□ -1.05
LINC01088-210ENST00000513153 PLAURQ03405 335 aa8.47□□□□□ -1.05
LINC01088-210ENST00000513153 PCSK7Q16549 785 aa8.47□□□□□ -1.05
LINC01088-210ENST00000513153 HIF1AQ16665 826 aa8.47□□□□□ -1.05
LINC01088-210ENST00000513153 PERM1Q5SV97 790 aa8.47□□□□□ -1.05
LINC01088-210ENST00000513153 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
LINC01088-210ENST00000513153 PPP1R12BO60237 982 aaPredicted RBP8.46□□□□□ -1.06
LINC01088-210ENST00000513153 DEAF1O75398 565 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms