RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 TNRC6CQ9HCJ0 1690 aaKnown RBP16.25■□□□□ 0.19
DEPDC1B-206ENST00000512452 HSPA8P11142 646 aaKnown RBP16.25■□□□□ 0.19
DEPDC1B-206ENST00000512452 FLAD1Q8NFF5 587 aa16.25■□□□□ 0.19
DEPDC1B-206ENST00000512452 ZNF496Q96IT1 587 aaPredicted RBP16.25■□□□□ 0.19
DEPDC1B-206ENST00000512452 UBR2Q8IWV8 1755 aa16.25■□□□□ 0.19
DEPDC1B-206ENST00000512452 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
DEPDC1B-206ENST00000512452 PDIA6Q15084 440 aa16.24■□□□□ 0.19
DEPDC1B-206ENST00000512452 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
DEPDC1B-206ENST00000512452 LINS1Q8NG48 757 aa16.23■□□□□ 0.19
DEPDC1B-206ENST00000512452 SSH3Q8TE77 659 aa16.23■□□□□ 0.19
DEPDC1B-206ENST00000512452 LRRFIP2Q9Y608 721 aaKnown RBP16.23■□□□□ 0.19
DEPDC1B-206ENST00000512452 UTYO14607 1347 aa16.22■□□□□ 0.19
DEPDC1B-206ENST00000512452 VEGFAP15692 232 aaPredicted RBP16.22■□□□□ 0.19
DEPDC1B-206ENST00000512452 MTX1Q13505 466 aa16.22■□□□□ 0.19
DEPDC1B-206ENST00000512452 POLA2Q14181 598 aa16.22■□□□□ 0.19
DEPDC1B-206ENST00000512452 PROSER3Q2NL68 480 aa16.22■□□□□ 0.19
DEPDC1B-206ENST00000512452 PLEKHM2Q8IWE5 1019 aa16.22■□□□□ 0.19
DEPDC1B-206ENST00000512452 TBC1D32Q96NH3 1257 aa16.22■□□□□ 0.19
DEPDC1B-206ENST00000512452 RNF181Q9P0P0 153 aa16.22■□□□□ 0.19
DEPDC1B-206ENST00000512452 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
DEPDC1B-206ENST00000512452 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
DEPDC1B-206ENST00000512452 PRPF38BQ5VTL8 546 aaKnown RBP16.21■□□□□ 0.19
DEPDC1B-206ENST00000512452 OSBPL3Q9H4L5 887 aa16.21■□□□□ 0.19
DEPDC1B-206ENST00000512452 CNTNAP1P78357 1384 aa16.21■□□□□ 0.19
DEPDC1B-206ENST00000512452 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
DEPDC1B-206ENST00000512452 ANXA1P04083 346 aa16.2■□□□□ 0.18
DEPDC1B-206ENST00000512452 HSP90AB4PQ58FF6 505 aa16.2■□□□□ 0.18
DEPDC1B-206ENST00000512452 SEC24BO95487 1268 aa16.19■□□□□ 0.18
DEPDC1B-206ENST00000512452 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
DEPDC1B-206ENST00000512452 TTC22Q5TAA0 569 aa16.19■□□□□ 0.18
DEPDC1B-206ENST00000512452 LRP10Q7Z4F1 713 aa16.19■□□□□ 0.18
DEPDC1B-206ENST00000512452 LRRCC1Q9C099 1032 aa16.19■□□□□ 0.18
DEPDC1B-206ENST00000512452 COL15A1P39059 1388 aa16.18■□□□□ 0.18
DEPDC1B-206ENST00000512452 A0A0G2JLW4 131 aa16.18■□□□□ 0.18
DEPDC1B-206ENST00000512452 CDC45O75419 566 aa16.18■□□□□ 0.18
DEPDC1B-206ENST00000512452 VEGFBP49765 207 aa16.18■□□□□ 0.18
DEPDC1B-206ENST00000512452 RIC3Q7Z5B4 369 aa16.18■□□□□ 0.18
DEPDC1B-206ENST00000512452 SYTL4Q96C24 671 aaPredicted RBP16.18■□□□□ 0.18
DEPDC1B-206ENST00000512452 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
DEPDC1B-206ENST00000512452 AOX1Q06278 1338 aa16.18■□□□□ 0.18
DEPDC1B-206ENST00000512452 PNMA6EA0A0J9YXQ4 647 aa16.17■□□□□ 0.18
DEPDC1B-206ENST00000512452 TGFB2P61812 414 aa16.17■□□□□ 0.18
DEPDC1B-206ENST00000512452 VSIG10Q8N0Z9 540 aa16.17■□□□□ 0.18
DEPDC1B-206ENST00000512452 DDX54Q8TDD1 881 aaKnown RBP16.17■□□□□ 0.18
DEPDC1B-206ENST00000512452 XAGE3Q8WTP9 111 aa16.17■□□□□ 0.18
DEPDC1B-206ENST00000512452 ANP32EQ9BTT0 268 aa16.17■□□□□ 0.18
DEPDC1B-206ENST00000512452 TEX13AQ9BXU3 409 aaPredicted RBP16.17■□□□□ 0.18
DEPDC1B-206ENST00000512452 C9orf78Q9NZ63 289 aaPredicted RBP16.17■□□□□ 0.18
DEPDC1B-206ENST00000512452 DAXXQ9UER7 740 aaPredicted RBP16.17■□□□□ 0.18
DEPDC1B-206ENST00000512452 LY75O60449 1722 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 TOGARAM1Q9Y4F4 1720 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 GRM8O00222 908 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 NBPF7P0C2Y1 421 aaPredicted RBP16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 BECN1Q14457 450 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 ANKRD13DQ6ZTN6 518 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 PPP1R42Q7Z4L9 355 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 USP16Q9Y5T5 823 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 SALL3Q9BXA9 1300 aa16.16■□□□□ 0.18
DEPDC1B-206ENST00000512452 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
DEPDC1B-206ENST00000512452 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
DEPDC1B-206ENST00000512452 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
DEPDC1B-206ENST00000512452 C22orf23Q9BZE7 217 aa16.15■□□□□ 0.18
DEPDC1B-206ENST00000512452 STAP2Q9UGK3 403 aa16.15■□□□□ 0.18
DEPDC1B-206ENST00000512452 GSPT1P15170 499 aaKnown RBP16.14■□□□□ 0.17
DEPDC1B-206ENST00000512452 EXOC6BQ9Y2D4 811 aa16.14■□□□□ 0.17
DEPDC1B-206ENST00000512452 TNRC18O15417 2968 aaPredicted RBP16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 NEURL1BA8MQ27 555 aa16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 SRGAP3O43295 1099 aa16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 MYL6BP14649 208 aa16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 RBM25P49756 843 aaKnown RBP16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 PDE1AP54750 535 aa16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 CASC1Q6TDU7 716 aa16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 ERC1Q8IUD2 1116 aa16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
DEPDC1B-206ENST00000512452 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
DEPDC1B-206ENST00000512452 IGKV5-2P06315 115 aa16.12■□□□□ 0.17
DEPDC1B-206ENST00000512452 MFAP1P55081 439 aaKnown RBP16.12■□□□□ 0.17
DEPDC1B-206ENST00000512452 AIMP1Q12904 312 aaKnown RBP16.12■□□□□ 0.17
DEPDC1B-206ENST00000512452 GCKRQ14397 625 aa16.12■□□□□ 0.17
DEPDC1B-206ENST00000512452 ARFGEF2Q9Y6D5 1785 aa16.12■□□□□ 0.17
DEPDC1B-206ENST00000512452 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
DEPDC1B-206ENST00000512452 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
DEPDC1B-206ENST00000512452 MAP2K1Q02750 393 aaPredicted RBP16.11■□□□□ 0.17
DEPDC1B-206ENST00000512452 CWF19L2Q2TBE0 894 aaKnown RBP16.11■□□□□ 0.17
DEPDC1B-206ENST00000512452 GLTPD2A6NH11 291 aa16.1■□□□□ 0.17
DEPDC1B-206ENST00000512452 DPEP1P16444 411 aa16.1■□□□□ 0.17
DEPDC1B-206ENST00000512452 MX1P20591 662 aa16.1■□□□□ 0.17
DEPDC1B-206ENST00000512452 OTUD7AQ8TE49 926 aaPredicted RBP16.1■□□□□ 0.17
DEPDC1B-206ENST00000512452 MYD88Q99836 296 aa16.1■□□□□ 0.17
DEPDC1B-206ENST00000512452 NBPF26B4DH59 902 aa16.09■□□□□ 0.17
DEPDC1B-206ENST00000512452 APBB1O00213 710 aa16.09■□□□□ 0.17
DEPDC1B-206ENST00000512452 NBPF10Q6P3W6 841 aaKnown RBP16.09■□□□□ 0.17
DEPDC1B-206ENST00000512452 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
DEPDC1B-206ENST00000512452 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
DEPDC1B-206ENST00000512452 ITGB4P16144 1822 aa16.09■□□□□ 0.17
DEPDC1B-206ENST00000512452 USP42Q9H9J4 1324 aaKnown RBP16.09■□□□□ 0.17
DEPDC1B-206ENST00000512452 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms